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The map label for this gene is yejH [H]

Identifier: 119775215

GI number: 119775215

Start: 2522415

End: 2524181

Strand: Direct

Name: yejH [H]

Synonym: Sama_2080

Alternate gene names: 119775215

Gene position: 2522415-2524181 (Clockwise)

Preceding gene: 119775214

Following gene: 119775216

Centisome position: 58.58

GC content: 54.84

Gene sequence:

>1767_bases
ATGCAGCACGATAGACGCCGCCAGCCGACAATGACGATAAAACTCAGGGATTATCAGCAAGATGCCATAGAAGCGACGCT
CGCCCACTTCAGAACGAGCCGCGAGTCTGCGCTATTGGTACTGCCAACCGGCGCCGGAAAAAGCCTGGTAATAGCCGAGC
TTGCCCGCTTGGCAAAAGGGCGGGTATTGGTGCTGACCCACGTTAAAGAATTGGTGGCACAAAACGCCCAAAAGGTAGAT
GCGCTCGCTGGCAACGCCAGTATCTTTTCCGCCGGACTGGGCGAAAAAGACAGCGGCGGTAAAACCGTGGTGGCCGGTAT
TCAATCGGCTGCTGTCAATGTTGCGGCCTTTGATGAGCCATTTTCGCTCGTGATCATCGATGAGTGCCACAGAGTCAGCC
TTGATGAAAACAGCCAGTATCGGCAGGTCTTCAGTCAGCTGCGGGAGAAAAACCCCGATCTCTTGCTGCTTGGACTCACT
GCCACCCCCTATCGGTTGGGGGAAGGCGCCATTTATAAACGCCATGTTCGCGGTCATGTGGGCAACCCGGATAAAGGGGT
GTTTGATGTCTGTATCTTCGAACTGCCCATCCGCAGTTTGATTAAGCAAGGGTATTTAACCGAGCCGTTGCTGCTCGATG
GTCTCGCAGCTCAGTATAACTTCGCCGCACTGAAGGCATCAGAGGATGCGGATTACCAGGAGGCTGAAGTTCAGGCTATT
CTTGACACCAGTACCCGGGCTACGACGACCATCATGGGTCAGCTAAAGGCCCTGGCCCAGCAGCGGCTGGGAGTCATTAT
CTTTGCGGCTACGGTTCGCCATGCAAAAGAAATCATGGCGCTGCTGGATGAAAGTGCAGCACTTATCACCGCCGATACTC
CCGGCCCCGAGCGCGATAACATCATCACCGCATTTAAAGCACAGGAACTGAAATTTCTGGTGAATGTGGCGGTGCTGACC
ACGGGCTTTGACGCGCCCCATGTGGATTTGATAGCCATATTACGGCCCACGGCCTCGGTAAGTCTGTTTCAGCAAATGGT
TGGGCGGGGCCTCAGACTGTTTCCAGGCAAGGCTGAGTGTCTCATCCTTGACTACGCCGCCAACGGCTTCAGCCTGTATC
ACCCGGATGTGGGTAAGCCCAGACCCGACAGCAAAAGCGTCCCCGTGCAGGTGCCCTGCCCAGCCTGCGGCTTTGCCAAC
CTCTTTTGGGGCAAAGCCGATACCGATGGCGACATAATCGAGCACTACGGCCGGCGCTGCCAGGGGTTACTCGACGATGG
CAATCAGTGTGATTTTCGTTTTCGGGCACGTATCTGTCCCGATTGCGGAGCCGAAAATGACATTGCTGCCAGAGTCTGCC
GTGGCTGCGACTCTGCTCTCGTCGACCCGGACAAGCACCTTAAAGCCGTGCTTGCACATAAGCACCATCACCTCTTTAAA
GTGACCGACATGCTGCTTGGCGCCACCGACGCTGGCCTGGAGGTGACTTATCTGGATATGGACGGCAACAGCTTCATAGA
AAGGTTCAAAATGCAAACCCCGGGGCAGAGGAAAGCCCTTTACGCCCTGTTTTTACTCCGCCACCAACGGGCTCCGGGAC
TAGCACTGCCCAAATATCCTGACGCAAAAGCCCTGATAAAAGACAGCGCAAAATTCAGGGCGCCGGAGCTGCTGTTGCTG
AAAAAGAGCAAGTTTGGTTGGCAGCTCGTCGATAAATTTTTTGATTACCGGGGTAAGTATCAAACCCGCGCTCGTTTTGA
AGACTAA

Upstream 100 bases:

>100_bases
CCTTTCTTCTCCTCGAGCTTGGCCCCTGAATAAGGGGCCTTTTTTTGCCCCGAATTCAACGTCTCCACCGTGATGATGGT
ACAATCGTCGCCTTTAAACC

Downstream 100 bases:

>100_bases
AGACAGCCACGGATTATCAAAACCACCCTGGCTGTGATATAACAGCCACACAGTATCGTTCTGAGGAGACTACATGTACG
TTGTAATTTTTGGCCGTCCC

Product: helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MQHDRRRQPTMTIKLRDYQQDAIEATLAHFRTSRESALLVLPTGAGKSLVIAELARLAKGRVLVLTHVKELVAQNAQKVD
ALAGNASIFSAGLGEKDSGGKTVVAGIQSAAVNVAAFDEPFSLVIIDECHRVSLDENSQYRQVFSQLREKNPDLLLLGLT
ATPYRLGEGAIYKRHVRGHVGNPDKGVFDVCIFELPIRSLIKQGYLTEPLLLDGLAAQYNFAALKASEDADYQEAEVQAI
LDTSTRATTTIMGQLKALAQQRLGVIIFAATVRHAKEIMALLDESAALITADTPGPERDNIITAFKAQELKFLVNVAVLT
TGFDAPHVDLIAILRPTASVSLFQQMVGRGLRLFPGKAECLILDYAANGFSLYHPDVGKPRPDSKSVPVQVPCPACGFAN
LFWGKADTDGDIIEHYGRRCQGLLDDGNQCDFRFRARICPDCGAENDIAARVCRGCDSALVDPDKHLKAVLAHKHHHLFK
VTDMLLGATDAGLEVTYLDMDGNSFIERFKMQTPGQRKALYALFLLRHQRAPGLALPKYPDAKALIKDSAKFRAPELLLL
KKSKFGWQLVDKFFDYRGKYQTRARFED

Sequences:

>Translated_588_residues
MQHDRRRQPTMTIKLRDYQQDAIEATLAHFRTSRESALLVLPTGAGKSLVIAELARLAKGRVLVLTHVKELVAQNAQKVD
ALAGNASIFSAGLGEKDSGGKTVVAGIQSAAVNVAAFDEPFSLVIIDECHRVSLDENSQYRQVFSQLREKNPDLLLLGLT
ATPYRLGEGAIYKRHVRGHVGNPDKGVFDVCIFELPIRSLIKQGYLTEPLLLDGLAAQYNFAALKASEDADYQEAEVQAI
LDTSTRATTTIMGQLKALAQQRLGVIIFAATVRHAKEIMALLDESAALITADTPGPERDNIITAFKAQELKFLVNVAVLT
TGFDAPHVDLIAILRPTASVSLFQQMVGRGLRLFPGKAECLILDYAANGFSLYHPDVGKPRPDSKSVPVQVPCPACGFAN
LFWGKADTDGDIIEHYGRRCQGLLDDGNQCDFRFRARICPDCGAENDIAARVCRGCDSALVDPDKHLKAVLAHKHHHLFK
VTDMLLGATDAGLEVTYLDMDGNSFIERFKMQTPGQRKALYALFLLRHQRAPGLALPKYPDAKALIKDSAKFRAPELLLL
KKSKFGWQLVDKFFDYRGKYQTRARFED
>Mature_588_residues
MQHDRRRQPTMTIKLRDYQQDAIEATLAHFRTSRESALLVLPTGAGKSLVIAELARLAKGRVLVLTHVKELVAQNAQKVD
ALAGNASIFSAGLGEKDSGGKTVVAGIQSAAVNVAAFDEPFSLVIIDECHRVSLDENSQYRQVFSQLREKNPDLLLLGLT
ATPYRLGEGAIYKRHVRGHVGNPDKGVFDVCIFELPIRSLIKQGYLTEPLLLDGLAAQYNFAALKASEDADYQEAEVQAI
LDTSTRATTTIMGQLKALAQQRLGVIIFAATVRHAKEIMALLDESAALITADTPGPERDNIITAFKAQELKFLVNVAVLT
TGFDAPHVDLIAILRPTASVSLFQQMVGRGLRLFPGKAECLILDYAANGFSLYHPDVGKPRPDSKSVPVQVPCPACGFAN
LFWGKADTDGDIIEHYGRRCQGLLDDGNQCDFRFRARICPDCGAENDIAARVCRGCDSALVDPDKHLKAVLAHKHHHLFK
VTDMLLGATDAGLEVTYLDMDGNSFIERFKMQTPGQRKALYALFLLRHQRAPGLALPKYPDAKALIKDSAKFRAPELLLL
KKSKFGWQLVDKFFDYRGKYQTRARFED

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788511, Length=580, Percent_Identity=55.8620689655172, Blast_Score=625, Evalue=1e-180,
Organism=Saccharomyces cerevisiae, GI6320539, Length=371, Percent_Identity=26.4150943396226, Blast_Score=125, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 64810; Mature: 64810

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHDRRRQPTMTIKLRDYQQDAIEATLAHFRTSRESALLVLPTGAGKSLVIAELARLAKG
CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCC
RVLVLTHVKELVAQNAQKVDALAGNASIFSAGLGEKDSGGKTVVAGIQSAAVNVAAFDEP
CEEEEHHHHHHHHCCHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEHHHHEEEEEEECCC
FSLVIIDECHRVSLDENSQYRQVFSQLREKNPDLLLLGLTATPYRLGEGAIYKRHVRGHV
EEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCEEEHHHCCCC
GNPDKGVFDVCIFELPIRSLIKQGYLTEPLLLDGLAAQYNFAALKASEDADYQEAEVQAI
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHCCCEEEEECCCCCCCHHHHHHHE
LDTSTRATTTIMGQLKALAQQRLGVIIFAATVRHAKEIMALLDESAALITADTPGPERDN
ECCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
IITAFKAQELKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMVGRGLRLFPGKAEC
EEEEEHHHHHHHHHEEEHEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCEEECCCCCCE
LILDYAANGFSLYHPDVGKPRPDSKSVPVQVPCPACGFANLFWGKADTDGDIIEHYGRRC
EEEEECCCCEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHH
QGLLDDGNQCDFRFRARICPDCGAENDIAARVCRGCDSALVDPDKHLKAVLAHKHHHLFK
HHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
VTDMLLGATDAGLEVTYLDMDGNSFIERFKMQTPGQRKALYALFLLRHQRAPGLALPKYP
HHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
DAKALIKDSAKFRAPELLLLKKSKFGWQLVDKFFDYRGKYQTRARFED
CHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQHDRRRQPTMTIKLRDYQQDAIEATLAHFRTSRESALLVLPTGAGKSLVIAELARLAKG
CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCC
RVLVLTHVKELVAQNAQKVDALAGNASIFSAGLGEKDSGGKTVVAGIQSAAVNVAAFDEP
CEEEEHHHHHHHHCCHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEHHHHEEEEEEECCC
FSLVIIDECHRVSLDENSQYRQVFSQLREKNPDLLLLGLTATPYRLGEGAIYKRHVRGHV
EEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCEEEHHHCCCC
GNPDKGVFDVCIFELPIRSLIKQGYLTEPLLLDGLAAQYNFAALKASEDADYQEAEVQAI
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHCCCEEEEECCCCCCCHHHHHHHE
LDTSTRATTTIMGQLKALAQQRLGVIIFAATVRHAKEIMALLDESAALITADTPGPERDN
ECCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
IITAFKAQELKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMVGRGLRLFPGKAEC
EEEEEHHHHHHHHHEEEHEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCEEECCCCCCE
LILDYAANGFSLYHPDVGKPRPDSKSVPVQVPCPACGFANLFWGKADTDGDIIEHYGRRC
EEEEECCCCEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHH
QGLLDDGNQCDFRFRARICPDCGAENDIAARVCRGCDSALVDPDKHLKAVLAHKHHHLFK
HHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
VTDMLLGATDAGLEVTYLDMDGNSFIERFKMQTPGQRKALYALFLLRHQRAPGLALPKYP
HHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
DAKALIKDSAKFRAPELLLLKKSKFGWQLVDKFFDYRGKYQTRARFED
CHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]