| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is grxA [H]
Identifier: 119775216
GI number: 119775216
Start: 2524255
End: 2524515
Strand: Direct
Name: grxA [H]
Synonym: Sama_2081
Alternate gene names: 119775216
Gene position: 2524255-2524515 (Clockwise)
Preceding gene: 119775215
Following gene: 119775217
Centisome position: 58.62
GC content: 53.26
Gene sequence:
>261_bases ATGTACGTTGTAATTTTTGGCCGTCCCGGCTGCCCCTATTGCGTTCGCGCCGAGCAACTTTGTGAGCAGCTTGCCGAAAA ACGTGAAGACTTCCGCTTCCGCTATGTGGATATCCATGCCGAAGGGATCAGTAAAGAAGACCTGTCCAAGACGGTTGGCA AGCCAGTGGAAACCGTGCCGCAGATTTTTGTGGACAAGACCCATGTAGGTGGCTGCACCGATTTTGAGGCCTATGTTCGC GAGCACAATCTGCTGGCCTGA
Upstream 100 bases:
>100_bases CAAACCCGCGCTCGTTTTGAAGACTAAAGACAGCCACGGATTATCAAAACCACCCTGGCTGTGATATAACAGCCACACAG TATCGTTCTGAGGAGACTAC
Downstream 100 bases:
>100_bases GCCCGATACAAAAAGCCTGCTTAATGCAGGCTTTTTGTTGGCTGTTCAGTCTCTTGCTGGTATGCAAATGGATTCATGGC TATGCTGAATTAATGTCGGC
Product: glutaredoxin 1
Products: deoxyribonucleotides [C]
Alternate protein names: Grx1 [H]
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MYVVIFGRPGCPYCVRAEQLCEQLAEKREDFRFRYVDIHAEGISKEDLSKTVGKPVETVPQIFVDKTHVGGCTDFEAYVR EHNLLA
Sequences:
>Translated_86_residues MYVVIFGRPGCPYCVRAEQLCEQLAEKREDFRFRYVDIHAEGISKEDLSKTVGKPVETVPQIFVDKTHVGGCTDFEAYVR EHNLLA >Mature_86_residues MYVVIFGRPGCPYCVRAEQLCEQLAEKREDFRFRYVDIHAEGISKEDLSKTVGKPVETVPQIFVDKTHVGGCTDFEAYVR EHNLLA
Specific function: The disulfide bond functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. In addition, it is also involved in reducing some disulfides in a coupled system with glutathione re
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1787073, Length=82, Percent_Identity=65.8536585365854, Blast_Score=124, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR014025 - InterPro: IPR011902 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 9850; Mature: 9850
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVVIFGRPGCPYCVRAEQLCEQLAEKREDFRFRYVDIHAEGISKEDLSKTVGKPVETVP CEEEEECCCCCCHHHCHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHCCCHHHHH QIFVDKTHVGGCTDFEAYVREHNLLA HHHHCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MYVVIFGRPGCPYCVRAEQLCEQLAEKREDFRFRYVDIHAEGISKEDLSKTVGKPVETVP CEEEEECCCCCCHHHCHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHCCCHHHHH QIFVDKTHVGGCTDFEAYVREHNLLA HHHHCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ribonucleotides [C]
Specific reaction: ribonucleotides = deoxyribonucleotides [C]
General reaction: deoxyribonucleotide biosynthesis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]