| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is acsA
Identifier: 119775214
GI number: 119775214
Start: 2520358
End: 2522310
Strand: Direct
Name: acsA
Synonym: Sama_2079
Alternate gene names: 119775214
Gene position: 2520358-2522310 (Clockwise)
Preceding gene: 119775211
Following gene: 119775215
Centisome position: 58.53
GC content: 56.22
Gene sequence:
>1953_bases ATGAGCACGCAGTCTCTCTACTCAGTGCCCGCCGATATCGCCGCCAATGCACTGGTAAACAACGAACAATATCAAAAGAT GTACCAGGAATCCGTTGCCAATCCCGAGGGTTTTTGGGGAGAGCATGCCAAGCGCATCGATTGGATTAAACCTTTCACCC AGGTCAAAGACACTTCCTACGATGACCAGAACCTGTATATCAAATGGTTCCATGACGGCACACTCAATGCGTCGGCCAAC TGTCTTGATCGCCATCTGGCCTCCAAGGGTGACGATGTCGCCATCATTTGGGAAGGCGATGATGCCAGCGAGCAGCGCAA AGTCACCTATCGTGAACTGCACGCCGAGGTGTGTCAGTTTGCCAATGCCCTCAAGGCTGAAGGTGTAAAGCGCGGTGATG TTGTCACCATTTATATGCCCATGGTGGTCGAAGCGACCGTCGCCATGCTGGCCTGTGCCCGCATAGGTGCTGTGCATTCG GTTGTGTTCGGTGGTTTCTCACCAGACTCCATCGCATCCCGCGTCATTGACGGTAAATCCAAACTGCTGATTACCGCCGA CGAAGGCGTGCGTGGTGGCCGTAAAATTCCGCTTAAAGGGAATATCGATGAGGCGCTGAATCGTCCCGATGTGACCACAG TAGAAACCGTTATCGTGCTCAAACGCACCGGCGGCGCGGTAAACTGGGTCGAAGGCCGCGATAAATGGTGGCATCAGGTA ACTGACGGTGCCGCAACCGAGTGTGCCGTTGAGGAAATGGGGGCCGAAGACCCGCTGTTTTTGCTGTATACCTCAGGCTC TACCGGTAATCCAAAAGGCGTGCTGCACACCACAGGTGGTTACCTCGTTTACGCCTCTATGACCCACGAATATGTGTTTG ATTACAAACCCGGTGAAGTGTACTGGTGTACCGCCGACGTGGGCTGGATCACCGGCCACAGCTACATGGTCTACGGGCCA CTGGCCAACGGTGCCACCATCCTTATCCATGAGGGTATCCCCAACTTCCCAAGCCCGGCACGCCTGGGTGAAATCGTGGA CCGTCATCAGGTCAATATCCTGTACACAGCCCCTACCCTTATCCGTGCGCTCATGGCCGAAGGCAAGCAGCACTTTGATA ATTTCGATGGCAAATCGCTGCGTATCATGGGCTCGGTGGGTGAACCCATCAACCCAGAAGCCTGGCGCTGGTACCACGAA GTCATTGGCCATGAACATTGCCCAATCGTGGATACCTGGTGGCAAACCGAAACCGGCGGCATCCTGATCACGCCGCTGCC GGGTGCCACCGACACCAAGCCGGGCTCTGCTACCCGCCCCTTCTTTGGTGTGCAGCCAGCGCTGGTGGACAACGAAGGTA ATATTCTCGAAGGCGCCACCGAAGGCAACCTGGTGCTGCTGGACTCCTGGCCCGGACAGATGCGTACCGTATACGGCGAT CACGAGCGCTTTGTGCTGACCTATTTCAAGACCTTCCGCGGCATGTACTTCACCGGTGACGGTGCCCGTCGTGATGAGGA CGGTTACTACTGGATCACCGGTCGTGTGGATGACGTGATTAACGTGTCCGGCCACCGCCTCGGCACAGCTGAAGTGGAAA GTGCCCTGGTAGCACATGACCTGGTTGCCGAAGCCGCTGTAGTGGGTTACCCCCATGACATCAAGGGACAGGGTATTTAT GCCTATGTCACCCTGACCAAGGGCACCGAAGCGACAGAAGAACTGCGTCAGGAACTGCGTCAGTGGGTACGTAAAGAAAT CGGCGCCCTGGCAACCCCCGATTTGATCCAGTGGGCCAGCGGCTTGCCCAAGACCCGCTCCGGTAAAATCATGCGCCGCT TCCTGCGCAAGATTGCGGCAAACGAAATCACCAACCTGGGTGATGCTTCCACCCTGGCCGACCCATCGGTTATCGATACC CTTATCGAAAGCCGCTTGAATCGCGCCGACTAA
Upstream 100 bases:
>100_bases AAAATAAGGAAAAAAACAAACTAGACCAAGGTCTAATAGTGTGTGAGGGGTGCCATGCCCATACTCAAGCTCACGCAACA AATTATAAAAGGGAAGCCCT
Downstream 100 bases:
>100_bases CCAACCTTTCTTCTCCTCGAGCTTGGCCCCTGAATAAGGGGCCTTTTTTTGCCCCGAATTCAACGTCTCCACCGTGATGA TGGTACAATCGTCGCCTTTA
Product: acetyl-CoA synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme
Number of amino acids: Translated: 650; Mature: 649
Protein sequence:
>650_residues MSTQSLYSVPADIAANALVNNEQYQKMYQESVANPEGFWGEHAKRIDWIKPFTQVKDTSYDDQNLYIKWFHDGTLNASAN CLDRHLASKGDDVAIIWEGDDASEQRKVTYRELHAEVCQFANALKAEGVKRGDVVTIYMPMVVEATVAMLACARIGAVHS VVFGGFSPDSIASRVIDGKSKLLITADEGVRGGRKIPLKGNIDEALNRPDVTTVETVIVLKRTGGAVNWVEGRDKWWHQV TDGAATECAVEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYLVYASMTHEYVFDYKPGEVYWCTADVGWITGHSYMVYGP LANGATILIHEGIPNFPSPARLGEIVDRHQVNILYTAPTLIRALMAEGKQHFDNFDGKSLRIMGSVGEPINPEAWRWYHE VIGHEHCPIVDTWWQTETGGILITPLPGATDTKPGSATRPFFGVQPALVDNEGNILEGATEGNLVLLDSWPGQMRTVYGD HERFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHDLVAEAAVVGYPHDIKGQGIY AYVTLTKGTEATEELRQELRQWVRKEIGALATPDLIQWASGLPKTRSGKIMRRFLRKIAANEITNLGDASTLADPSVIDT LIESRLNRAD
Sequences:
>Translated_650_residues MSTQSLYSVPADIAANALVNNEQYQKMYQESVANPEGFWGEHAKRIDWIKPFTQVKDTSYDDQNLYIKWFHDGTLNASAN CLDRHLASKGDDVAIIWEGDDASEQRKVTYRELHAEVCQFANALKAEGVKRGDVVTIYMPMVVEATVAMLACARIGAVHS VVFGGFSPDSIASRVIDGKSKLLITADEGVRGGRKIPLKGNIDEALNRPDVTTVETVIVLKRTGGAVNWVEGRDKWWHQV TDGAATECAVEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYLVYASMTHEYVFDYKPGEVYWCTADVGWITGHSYMVYGP LANGATILIHEGIPNFPSPARLGEIVDRHQVNILYTAPTLIRALMAEGKQHFDNFDGKSLRIMGSVGEPINPEAWRWYHE VIGHEHCPIVDTWWQTETGGILITPLPGATDTKPGSATRPFFGVQPALVDNEGNILEGATEGNLVLLDSWPGQMRTVYGD HERFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHDLVAEAAVVGYPHDIKGQGIY AYVTLTKGTEATEELRQELRQWVRKEIGALATPDLIQWASGLPKTRSGKIMRRFLRKIAANEITNLGDASTLADPSVIDT LIESRLNRAD >Mature_649_residues STQSLYSVPADIAANALVNNEQYQKMYQESVANPEGFWGEHAKRIDWIKPFTQVKDTSYDDQNLYIKWFHDGTLNASANC LDRHLASKGDDVAIIWEGDDASEQRKVTYRELHAEVCQFANALKAEGVKRGDVVTIYMPMVVEATVAMLACARIGAVHSV VFGGFSPDSIASRVIDGKSKLLITADEGVRGGRKIPLKGNIDEALNRPDVTTVETVIVLKRTGGAVNWVEGRDKWWHQVT DGAATECAVEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYLVYASMTHEYVFDYKPGEVYWCTADVGWITGHSYMVYGPL ANGATILIHEGIPNFPSPARLGEIVDRHQVNILYTAPTLIRALMAEGKQHFDNFDGKSLRIMGSVGEPINPEAWRWYHEV IGHEHCPIVDTWWQTETGGILITPLPGATDTKPGSATRPFFGVQPALVDNEGNILEGATEGNLVLLDSWPGQMRTVYGDH ERFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHDLVAEAAVVGYPHDIKGQGIYA YVTLTKGTEATEELRQELRQWVRKEIGALATPDLIQWASGLPKTRSGKIMRRFLRKIAANEITNLGDASTLADPSVIDTL IESRLNRAD
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family
Homologues:
Organism=Homo sapiens, GI8923896, Length=670, Percent_Identity=52.089552238806, Blast_Score=684, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=683, Percent_Identity=51.0980966325037, Blast_Score=680, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=624, Percent_Identity=49.3589743589744, Blast_Score=622, Evalue=1e-178, Organism=Homo sapiens, GI13375727, Length=643, Percent_Identity=35.9253499222395, Blast_Score=392, Evalue=1e-109, Organism=Homo sapiens, GI42544132, Length=541, Percent_Identity=29.2051756007394, Blast_Score=202, Evalue=8e-52, Organism=Homo sapiens, GI122937307, Length=552, Percent_Identity=28.2608695652174, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI38505220, Length=532, Percent_Identity=30.2631578947368, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI31982927, Length=643, Percent_Identity=25.5054432348367, Blast_Score=184, Evalue=3e-46, Organism=Homo sapiens, GI115511026, Length=544, Percent_Identity=29.2279411764706, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI58082049, Length=565, Percent_Identity=26.0176991150442, Blast_Score=173, Evalue=5e-43, Organism=Homo sapiens, GI157311624, Length=565, Percent_Identity=25.4867256637168, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI157311622, Length=565, Percent_Identity=25.4867256637168, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI195947378, Length=440, Percent_Identity=24.5454545454545, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI187761345, Length=390, Percent_Identity=27.9487179487179, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI187761343, Length=390, Percent_Identity=27.9487179487179, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI42544134, Length=359, Percent_Identity=25.0696378830084, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI156151445, Length=595, Percent_Identity=22.6890756302521, Blast_Score=94, Evalue=5e-19, Organism=Escherichia coli, GI1790505, Length=645, Percent_Identity=68.8372093023256, Blast_Score=967, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=633, Percent_Identity=37.2827804107425, Blast_Score=404, Evalue=1e-114, Organism=Escherichia coli, GI1788107, Length=553, Percent_Identity=24.7739602169982, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI221142682, Length=529, Percent_Identity=22.3062381852552, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786810, Length=548, Percent_Identity=22.0802919708029, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI145693145, Length=533, Percent_Identity=24.202626641651, Blast_Score=93, Evalue=7e-20, Organism=Escherichia coli, GI1789201, Length=371, Percent_Identity=23.1805929919137, Blast_Score=68, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71982997, Length=662, Percent_Identity=49.5468277945619, Blast_Score=631, Evalue=0.0, Organism=Caenorhabditis elegans, GI71983001, Length=660, Percent_Identity=49.6969696969697, Blast_Score=631, Evalue=0.0, Organism=Caenorhabditis elegans, GI17569507, Length=661, Percent_Identity=22.3903177004539, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17558820, Length=538, Percent_Identity=23.4200743494424, Blast_Score=105, Evalue=7e-23, Organism=Caenorhabditis elegans, GI32563687, Length=521, Percent_Identity=23.2245681381958, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71985884, Length=594, Percent_Identity=22.3905723905724, Blast_Score=89, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538037, Length=137, Percent_Identity=32.8467153284672, Blast_Score=78, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17560140, Length=380, Percent_Identity=22.1052631578947, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17557194, Length=127, Percent_Identity=33.8582677165354, Blast_Score=73, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323182, Length=647, Percent_Identity=49.1499227202473, Blast_Score=617, Evalue=1e-177, Organism=Saccharomyces cerevisiae, GI6319264, Length=641, Percent_Identity=46.6458658346334, Blast_Score=563, Evalue=1e-161, Organism=Saccharomyces cerevisiae, GI6319699, Length=555, Percent_Identity=21.6216216216216, Blast_Score=100, Evalue=6e-22, Organism=Drosophila melanogaster, GI24667955, Length=664, Percent_Identity=53.1626506024096, Blast_Score=691, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=559, Percent_Identity=56.8872987477639, Blast_Score=633, Evalue=0.0, Organism=Drosophila melanogaster, GI24667959, Length=520, Percent_Identity=56.9230769230769, Blast_Score=592, Evalue=1e-169, Organism=Drosophila melanogaster, GI21355225, Length=633, Percent_Identity=35.7030015797788, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI18859661, Length=540, Percent_Identity=24.0740740740741, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI21355181, Length=532, Percent_Identity=23.4962406015038, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24581924, Length=550, Percent_Identity=21.6363636363636, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI21358303, Length=544, Percent_Identity=20.9558823529412, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24656500, Length=377, Percent_Identity=24.9336870026525, Blast_Score=70, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACSA_SHEAM (A1S7C8)
Other databases:
- EMBL: CP000507 - RefSeq: YP_927954.1 - ProteinModelPortal: A1S7C8 - SMR: A1S7C8 - STRING: A1S7C8 - GeneID: 4604329 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_2079 - NMPDR: fig|326297.7.peg.1952 - eggNOG: COG0365 - HOGENOM: HBG547964 - OMA: ATYLEWY - PhylomeDB: A1S7C8 - ProtClustDB: PRK00174 - HAMAP: MF_01123 - InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 - TIGRFAMs: TIGR02188
Pfam domain/function: PF00501 AMP-binding
EC number: =6.2.1.1
Molecular weight: Translated: 71800; Mature: 71668
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00455 AMP_BINDING
Important sites: ACT_SITE 517-517
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQSLYSVPADIAANALVNNEQYQKMYQESVANPEGFWGEHAKRIDWIKPFTQVKDTSY CCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHCCCCC DDQNLYIKWFHDGTLNASANCLDRHLASKGDDVAIIWEGDDASEQRKVTYRELHAEVCQF CCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH ANALKAEGVKRGDVVTIYMPMVVEATVAMLACARIGAVHSVVFGGFSPDSIASRVIDGKS HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC KLLITADEGVRGGRKIPLKGNIDEALNRPDVTTVETVIVLKRTGGAVNWVEGRDKWWHQV EEEEEECCCCCCCEEECCCCCHHHHCCCCCCCEEEEEEEEEECCCEEEECCCCHHHHHHH TDGAATECAVEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYLVYASMTHEYVFDYKPGEV CCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEEECEEEEEEECCCEE YWCTADVGWITGHSYMVYGPLANGATILIHEGIPNFPSPARLGEIVDRHQVNILYTAPTL EEEECCCCEEECCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCEEEEEECHHH IRALMAEGKQHFDNFDGKSLRIMGSVGEPINPEAWRWYHEVIGHEHCPIVDTWWQTETGG HHHHHHHCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCC ILITPLPGATDTKPGSATRPFFGVQPALVDNEGNILEGATEGNLVLLDSWPGQMRTVYGD EEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEECCCCCEEEEECC HERFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHD CCHHHHEEHHHHCCEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH LVAEAAVVGYPHDIKGQGIYAYVTLTKGTEATEELRQELRQWVRKEIGALATPDLIQWAS HHHHHHHCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC GLPKTRSGKIMRRFLRKIAANEITNLGDASTLADPSVIDTLIESRLNRAD CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure STQSLYSVPADIAANALVNNEQYQKMYQESVANPEGFWGEHAKRIDWIKPFTQVKDTSY CCCHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHCCCCC DDQNLYIKWFHDGTLNASANCLDRHLASKGDDVAIIWEGDDASEQRKVTYRELHAEVCQF CCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH ANALKAEGVKRGDVVTIYMPMVVEATVAMLACARIGAVHSVVFGGFSPDSIASRVIDGKS HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC KLLITADEGVRGGRKIPLKGNIDEALNRPDVTTVETVIVLKRTGGAVNWVEGRDKWWHQV EEEEEECCCCCCCEEECCCCCHHHHCCCCCCCEEEEEEEEEECCCEEEECCCCHHHHHHH TDGAATECAVEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYLVYASMTHEYVFDYKPGEV CCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEEECEEEEEEECCCEE YWCTADVGWITGHSYMVYGPLANGATILIHEGIPNFPSPARLGEIVDRHQVNILYTAPTL EEEECCCCEEECCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCEEEEEECHHH IRALMAEGKQHFDNFDGKSLRIMGSVGEPINPEAWRWYHEVIGHEHCPIVDTWWQTETGG HHHHHHHCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCC ILITPLPGATDTKPGSATRPFFGVQPALVDNEGNILEGATEGNLVLLDSWPGQMRTVYGD EEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEECCCCCEEEEECC HERFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHD CCHHHHEEHHHHCCEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH LVAEAAVVGYPHDIKGQGIYAYVTLTKGTEATEELRQELRQWVRKEIGALATPDLIQWAS HHHHHHHCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC GLPKTRSGKIMRRFLRKIAANEITNLGDASTLADPSVIDTLIESRLNRAD CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA