| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is hisC
Identifier: 119775078
GI number: 119775078
Start: 2371142
End: 2372230
Strand: Direct
Name: hisC
Synonym: Sama_1943
Alternate gene names: 119775078
Gene position: 2371142-2372230 (Clockwise)
Preceding gene: 119775077
Following gene: 119775079
Centisome position: 55.06
GC content: 57.39
Gene sequence:
>1089_bases ATGACATCTCAGGTAAACGCAGTGCCAACGGATAGCCTGGCAGCCCGCCTCGCCCGCCCTGAGCTTTTAAGCCTTGAGCC CTACCAGAGCGCCCGGCGCATCGGCGGCAGCGGTGAGATCTGGGTGAATGCCAATGAATCGCCCTTTAACCGCACCGGCA TCGATGGCGCCAACCGCTATCCGGAGTGCCAGCCACCGGGGCTGATAGCGGCCTACGCGGCTTACGCCGGCGTTGCGGCC CATGAGCTGGTATGCGGCCGCGGCGCCGACGAAGCCATTGAACTGCTTATTCGCACCTTTTGTGTGCCCGGCCAAGACAG CATCGGCATTTTCAGCCCTACCTATGGCATGTACGCCATCAGTGCCGCCACCTTTAATGTGGCGGTTAACACCCTGCCGC TGGCAGAAGATTTCAGCCTGCCTGACGATATCTCGGCCTTAACAGGCAGCAAATTGGTGTTTGTCTGCAACCCCAATAAC CCAACCGGCACCCTGCTGCCGCTTGGTGAAATCGCGCGGGTGGCGAAAACCTTCCCCAATGCGCTGGTGGTGGTTGATGA AGCCTACATCGAATTTGCCCACAATGCTGATGGCTCACCCGCCCAAAGCGCCACCAGTTTGATGGCCGAGTTTGAAAATC TGGTGATTTTGCGCACCCTATCAAAAGCCTTTGGCCTGGCCGGTGCGCGCTGCGGTTTTCTGCTGGCGAAGCCCTCGGTG TGTGAGTTGGTGATGCGGGTGATTGCACCCTATCCTGTACCTGTTCCCGTATCAGTGATTGCTGAGAAAGCCCTTTCCGT TATGGGTATCGCTCAAATGCGCGCCGATGTGGTACTTCTTAATAAACAGGGCGCACGACTCGCTCTGGCGCTCACCGAGG CGGGTCTTAGCGTCCTGCCAAGCGGCGGTAACTATGTACTTGCCTTCAGCAATGATGTGGAAGTACTCGCCAGAGCCCTT ACCAAGGCTGGCATAGTCGCCAGACGCTACAGCCATCCAAGGCTTAAAGATGCCATTCGCATCAGCTATGCCAGCGAACA ACAAACGGATTCCATTATCGAGGCCATCGGCCGTATCGACAGCAAATAA
Upstream 100 bases:
>100_bases GTCAAACCGTGATGACTCTGGCTGCGGCCGAGTCGCTGGATGCCCACAAAAATGCAGTAAAAGTCAGGCTTGATGCCATC GCACGTGAGGAGAATCGTCA
Downstream 100 bases:
>100_bases TCACAAGGACAGAGTACCCATGCCCCAGAAAATGCTTTTTATCGACCGCGATGGCACCCTGATTGAGGAGCCGGTAACAG ATAAGCAGGTCGACAGTCTC
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MTSQVNAVPTDSLAARLARPELLSLEPYQSARRIGGSGEIWVNANESPFNRTGIDGANRYPECQPPGLIAAYAAYAGVAA HELVCGRGADEAIELLIRTFCVPGQDSIGIFSPTYGMYAISAATFNVAVNTLPLAEDFSLPDDISALTGSKLVFVCNPNN PTGTLLPLGEIARVAKTFPNALVVVDEAYIEFAHNADGSPAQSATSLMAEFENLVILRTLSKAFGLAGARCGFLLAKPSV CELVMRVIAPYPVPVPVSVIAEKALSVMGIAQMRADVVLLNKQGARLALALTEAGLSVLPSGGNYVLAFSNDVEVLARAL TKAGIVARRYSHPRLKDAIRISYASEQQTDSIIEAIGRIDSK
Sequences:
>Translated_362_residues MTSQVNAVPTDSLAARLARPELLSLEPYQSARRIGGSGEIWVNANESPFNRTGIDGANRYPECQPPGLIAAYAAYAGVAA HELVCGRGADEAIELLIRTFCVPGQDSIGIFSPTYGMYAISAATFNVAVNTLPLAEDFSLPDDISALTGSKLVFVCNPNN PTGTLLPLGEIARVAKTFPNALVVVDEAYIEFAHNADGSPAQSATSLMAEFENLVILRTLSKAFGLAGARCGFLLAKPSV CELVMRVIAPYPVPVPVSVIAEKALSVMGIAQMRADVVLLNKQGARLALALTEAGLSVLPSGGNYVLAFSNDVEVLARAL TKAGIVARRYSHPRLKDAIRISYASEQQTDSIIEAIGRIDSK >Mature_361_residues TSQVNAVPTDSLAARLARPELLSLEPYQSARRIGGSGEIWVNANESPFNRTGIDGANRYPECQPPGLIAAYAAYAGVAAH ELVCGRGADEAIELLIRTFCVPGQDSIGIFSPTYGMYAISAATFNVAVNTLPLAEDFSLPDDISALTGSKLVFVCNPNNP TGTLLPLGEIARVAKTFPNALVVVDEAYIEFAHNADGSPAQSATSLMAEFENLVILRTLSKAFGLAGARCGFLLAKPSVC ELVMRVIAPYPVPVPVSVIAEKALSVMGIAQMRADVVLLNKQGARLALALTEAGLSVLPSGGNYVLAFSNDVEVLARALT KAGIVARRYSHPRLKDAIRISYASEQQTDSIIEAIGRIDSK
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=350, Percent_Identity=45.1428571428571, Blast_Score=268, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6322075, Length=377, Percent_Identity=31.2997347480106, Blast_Score=149, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_SHEAM (A1S6Z2)
Other databases:
- EMBL: CP000507 - RefSeq: YP_927818.1 - ProteinModelPortal: A1S6Z2 - SMR: A1S6Z2 - STRING: A1S6Z2 - GeneID: 4604193 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_1943 - NMPDR: fig|326297.7.peg.1825 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: ISHPENI - PhylomeDB: A1S6Z2 - ProtClustDB: PRK04635 - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 38291; Mature: 38160
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQVNAVPTDSLAARLARPELLSLEPYQSARRIGGSGEIWVNANESPFNRTGIDGANRY CCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC PECQPPGLIAAYAAYAGVAAHELVCGRGADEAIELLIRTFCVPGQDSIGIFSPTYGMYAI CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEE SAATFNVAVNTLPLAEDFSLPDDISALTGSKLVFVCNPNNPTGTLLPLGEIARVAKTFPN EEEEEEEEEEEECCCCCCCCCCCHHHCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHCCC ALVVVDEAYIEFAHNADGSPAQSATSLMAEFENLVILRTLSKAFGLAGARCGFLLAKPSV EEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHH CELVMRVIAPYPVPVPVSVIAEKALSVMGIAQMRADVVLLNKQGARLALALTEAGLSVLP HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCCEEEC SGGNYVLAFSNDVEVLARALTKAGIVARRYSHPRLKDAIRISYASEQQTDSIIEAIGRID CCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCHHHHHHHHHHHHCC SK CC >Mature Secondary Structure TSQVNAVPTDSLAARLARPELLSLEPYQSARRIGGSGEIWVNANESPFNRTGIDGANRY CCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC PECQPPGLIAAYAAYAGVAAHELVCGRGADEAIELLIRTFCVPGQDSIGIFSPTYGMYAI CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEE SAATFNVAVNTLPLAEDFSLPDDISALTGSKLVFVCNPNNPTGTLLPLGEIARVAKTFPN EEEEEEEEEEEECCCCCCCCCCCHHHCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHCCC ALVVVDEAYIEFAHNADGSPAQSATSLMAEFENLVILRTLSKAFGLAGARCGFLLAKPSV EEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHH CELVMRVIAPYPVPVPVSVIAEKALSVMGIAQMRADVVLLNKQGARLALALTEAGLSVLP HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCCEEEC SGGNYVLAFSNDVEVLARALTKAGIVARRYSHPRLKDAIRISYASEQQTDSIIEAIGRID CCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCHHHHHHHHHHHHCC SK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA