| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yfiQ [H]
Identifier: 119774895
GI number: 119774895
Start: 2153130
End: 2155865
Strand: Reverse
Name: yfiQ [H]
Synonym: Sama_1760
Alternate gene names: 119774895
Gene position: 2155865-2153130 (Counterclockwise)
Preceding gene: 119774896
Following gene: 119774889
Centisome position: 50.06
GC content: 55.04
Gene sequence:
>2736_bases ATGAGTCAGCGCACCCTCAACACCCTGTTTAAACCTTCGTCAATTGCCATTATCGGTGCCTCCAATGGGCCAAGGCGCGC CGGTAATGTGGTGATGAAAAATCTGCTTGCCGGCGGTTTCTCAGGTCCCATCATGCCGGTCACGCCCAAATATCAGGCGG TGATGGGTGTTCTTGCCTACCCAAGCATAGAAGCGCTGCCCATAAAGCCCGACCTTGCCATTATCTGTACCCGCGCCAGC CGTGTGCCGGGGATCGTTGAAACCCTCGCCCAGTTTGGCTGTAAGGTCGCCATTATTATGGCGTCAGGGATGGCAAATGA GATGGACGGCGAAGGACAATCGCTGCTCGCCACCACCCTCGCCAACGCCAAACGCTATGGCATGCGCATTCTGGGGCCTA ACAGTTTAGGCATGATGTTGCCTAATCTCGGACTCAATGCCAGCCTGGCCCACACTTCCGCACAGCCAGGCAAAATTGCC TTTGTCAGTCAGTCTGCTGCCGTATGCACCACAGTACTGGACTGGGCCAATAACAAAGGCATTGGCTTTTCATCGTTTAT TTCACTTGGCGACGCCACCGACATCGACTTTGACGAACTGCTGGACTTTCTTGGACGCGATGGCCGTACCAGCGCCATCA TGCTCTATATGGACGCCATCAACGAAAAGCGCCACTTTCTCTCGGCGGCACGAGCTGCCGCCCGCAATAAGCCCATACTG GTGATTAAGTCTGGTCGTAGCCAGGAAGGCGCACGGGCGGCCAAACTGCATACCGGTGGAGTCAGTGGCAGTGACGCCGT CTATGAGGCCGCGTTCAGACGAGCAGGTATGCTGAGGGTGAATGACCTGGTTGAGATGTTCGCAGCACTGGAGAGCCTCA ACCACGGTAACGATCTGAAAGGTGAGCGTCTGGGGATCATCAGTAATGGCGGCGGCCCAGCGGTACTGGCTGTGGATGAG CTTATCAGCAGGGGGGGGAAGCTGGCCGAGCTGTCAGAGGATACCTGCCGAAAACTCGATACCGTGTTGCCCAAGACCTG GTCGGCACAAAACCCTATCGACATCATCGGGGATGCAGATGCCAAGCGTTATGTGGATGCACTGAATATCCTGATGGACA GTGACGACGCCGACGCCATTTTAGTGCTGCACTCGCCGTCGGCCCTGGGCGAAAGCGAACTGATTGCCGAGGCAGTTGCC GATGCCATTAAAAAGCACCCCCATCGCAGTAAACTGAACATCTTAACCAACTGGAGCGGCGAAAATTCGGCCTATAAGGC CAGAAAACGCTTCACCAAAGCGGGGGTTGCCACCTACCGGACACCTGAAGGCGCTGTGGGTGCCTTTATGCATATGGTGG AGTACCGCCGTAACCAAAAGTTGCTCCAGGAAGTGCCGCAATCCATCACCGACAAGGTGCCCCACGATGCCGGTAAAGCC CGCGAAGTCATGCAGGCAGCGCTGGCAAAGGGGAAAACCGTATTGGAAACCTACGATGCCAGTGCGATTTTGGGTGCTTA TGGCCTCAACACCATAGATACCTGGTTTGCCAAAGATGCCGCCGAGGCTGCGGATATCGCAGAACAAGTGGGTTATCCGA TAGCGCTTAAAATACAATCGCCGGATATTCTGCATAAATCCGATGTTTATGGAGTGACCTTAAACCTTACCAGCGCGGAT GAAATCCACCATGCTGCGATGGCGATGATGCAGCGGGTTCATCAGTCAAACCCCGAGGCGAAAATTGAAGGCTTGATAGT GCAGCGGATGGCGCTGACAGCAGGCGCGCAGGAACTTCGACTGGCCGTGATAAGCGACCCAGTATTCGGGCCTGCCATTT GCTTGGGTGAAGGCGGCTCAGAATGGCAACCCACCCGGGATGCCGCCGTTGCCCTGCCCCCGCTTAATATGGCGTTGGCG CGCTACATGGTGATCCAGGCATTGAAGACAGGTAAGTTGCGCGACCGCCACCTGCCTCAGGGCCTGGACATGCACGCCCT GTGTCTGATGCTGACACAGCTCAGCCATCTGGTGATTGATTGCCCACAAATTCAGGCACTGGACCTTAATCCCGTGCTGG CGGCCGGTGACAAGATAACCCTGCTGGACATTAATCTGAGGCTCGACCCGCAGTGCAGCGATAACACTAATCGCCTCGCC ATCATGCCCTATCCCAAGGAGCTCGAAGAGCAGGCTGTGCTGCGTAACGGCATTCAAGTGATGTTAAGGCCCATCCTCCC TGAAGATGAGCCCAAACACCTTGCCTTCGATAATTCGCTTACCGATGAAGACAGGTACAAGCGCTATTTTGGCGCCCGTC AGCGCATGACCCACGAAGAAATGGCGGTGCTGACCCAAATCGATTACGCGAGGGAGATGGCCTTTATCGCCACAGCTCAG GATGCCAACGGCGAGGATTACACCTTGGGCGCAGTGCGGGCATCGATTGACCCGGATAACACTGAAGCGGAATTTGCCAT GGCCGTGCGAAGCGATCACCAGGGGCTGGGCCTTGGTAAGTTATTGCTGGAAAAGCTTATCCGCTACTATCAGGCCAATG AAACTCAGGTATTGACGGGCTTTACCATGATTGAAAACCGTAACATGGCGAATCTGGCACGTACCCTCGGTTTTACGGTG ACTTTTGATATGGAAGAGCACCTGATTAAGATGCACATGGATCTTAAGGCAATCTCACCCAAGAATGGTGTTGATAACGA CCTGCATGCAACCTGA
Upstream 100 bases:
>100_bases AATAATTCGTATTAACATTATAAATTCATGATATTTCTCAAGTGATGCCTGCCTGTGGTTCATGTAGACTGTTTCTCATG CGTCAAAGGATGGAGTCTTC
Downstream 100 bases:
>100_bases CTGCTGAAAACCGCGTTCCGAATACAGTCATCTGATCACAGGGGAACGACCAGCGACCGATAACGGTCGCTAGTCAGCGA GGCAAACCCGGTTCCGGCCA
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 911; Mature: 910
Protein sequence:
>911_residues MSQRTLNTLFKPSSIAIIGASNGPRRAGNVVMKNLLAGGFSGPIMPVTPKYQAVMGVLAYPSIEALPIKPDLAIICTRAS RVPGIVETLAQFGCKVAIIMASGMANEMDGEGQSLLATTLANAKRYGMRILGPNSLGMMLPNLGLNASLAHTSAQPGKIA FVSQSAAVCTTVLDWANNKGIGFSSFISLGDATDIDFDELLDFLGRDGRTSAIMLYMDAINEKRHFLSAARAAARNKPIL VIKSGRSQEGARAAKLHTGGVSGSDAVYEAAFRRAGMLRVNDLVEMFAALESLNHGNDLKGERLGIISNGGGPAVLAVDE LISRGGKLAELSEDTCRKLDTVLPKTWSAQNPIDIIGDADAKRYVDALNILMDSDDADAILVLHSPSALGESELIAEAVA DAIKKHPHRSKLNILTNWSGENSAYKARKRFTKAGVATYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSITDKVPHDAGKA REVMQAALAKGKTVLETYDASAILGAYGLNTIDTWFAKDAAEAADIAEQVGYPIALKIQSPDILHKSDVYGVTLNLTSAD EIHHAAMAMMQRVHQSNPEAKIEGLIVQRMALTAGAQELRLAVISDPVFGPAICLGEGGSEWQPTRDAAVALPPLNMALA RYMVIQALKTGKLRDRHLPQGLDMHALCLMLTQLSHLVIDCPQIQALDLNPVLAAGDKITLLDINLRLDPQCSDNTNRLA IMPYPKELEEQAVLRNGIQVMLRPILPEDEPKHLAFDNSLTDEDRYKRYFGARQRMTHEEMAVLTQIDYAREMAFIATAQ DANGEDYTLGAVRASIDPDNTEAEFAMAVRSDHQGLGLGKLLLEKLIRYYQANETQVLTGFTMIENRNMANLARTLGFTV TFDMEEHLIKMHMDLKAISPKNGVDNDLHAT
Sequences:
>Translated_911_residues MSQRTLNTLFKPSSIAIIGASNGPRRAGNVVMKNLLAGGFSGPIMPVTPKYQAVMGVLAYPSIEALPIKPDLAIICTRAS RVPGIVETLAQFGCKVAIIMASGMANEMDGEGQSLLATTLANAKRYGMRILGPNSLGMMLPNLGLNASLAHTSAQPGKIA FVSQSAAVCTTVLDWANNKGIGFSSFISLGDATDIDFDELLDFLGRDGRTSAIMLYMDAINEKRHFLSAARAAARNKPIL VIKSGRSQEGARAAKLHTGGVSGSDAVYEAAFRRAGMLRVNDLVEMFAALESLNHGNDLKGERLGIISNGGGPAVLAVDE LISRGGKLAELSEDTCRKLDTVLPKTWSAQNPIDIIGDADAKRYVDALNILMDSDDADAILVLHSPSALGESELIAEAVA DAIKKHPHRSKLNILTNWSGENSAYKARKRFTKAGVATYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSITDKVPHDAGKA REVMQAALAKGKTVLETYDASAILGAYGLNTIDTWFAKDAAEAADIAEQVGYPIALKIQSPDILHKSDVYGVTLNLTSAD EIHHAAMAMMQRVHQSNPEAKIEGLIVQRMALTAGAQELRLAVISDPVFGPAICLGEGGSEWQPTRDAAVALPPLNMALA RYMVIQALKTGKLRDRHLPQGLDMHALCLMLTQLSHLVIDCPQIQALDLNPVLAAGDKITLLDINLRLDPQCSDNTNRLA IMPYPKELEEQAVLRNGIQVMLRPILPEDEPKHLAFDNSLTDEDRYKRYFGARQRMTHEEMAVLTQIDYAREMAFIATAQ DANGEDYTLGAVRASIDPDNTEAEFAMAVRSDHQGLGLGKLLLEKLIRYYQANETQVLTGFTMIENRNMANLARTLGFTV TFDMEEHLIKMHMDLKAISPKNGVDNDLHAT >Mature_910_residues SQRTLNTLFKPSSIAIIGASNGPRRAGNVVMKNLLAGGFSGPIMPVTPKYQAVMGVLAYPSIEALPIKPDLAIICTRASR VPGIVETLAQFGCKVAIIMASGMANEMDGEGQSLLATTLANAKRYGMRILGPNSLGMMLPNLGLNASLAHTSAQPGKIAF VSQSAAVCTTVLDWANNKGIGFSSFISLGDATDIDFDELLDFLGRDGRTSAIMLYMDAINEKRHFLSAARAAARNKPILV IKSGRSQEGARAAKLHTGGVSGSDAVYEAAFRRAGMLRVNDLVEMFAALESLNHGNDLKGERLGIISNGGGPAVLAVDEL ISRGGKLAELSEDTCRKLDTVLPKTWSAQNPIDIIGDADAKRYVDALNILMDSDDADAILVLHSPSALGESELIAEAVAD AIKKHPHRSKLNILTNWSGENSAYKARKRFTKAGVATYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSITDKVPHDAGKAR EVMQAALAKGKTVLETYDASAILGAYGLNTIDTWFAKDAAEAADIAEQVGYPIALKIQSPDILHKSDVYGVTLNLTSADE IHHAAMAMMQRVHQSNPEAKIEGLIVQRMALTAGAQELRLAVISDPVFGPAICLGEGGSEWQPTRDAAVALPPLNMALAR YMVIQALKTGKLRDRHLPQGLDMHALCLMLTQLSHLVIDCPQIQALDLNPVLAAGDKITLLDINLRLDPQCSDNTNRLAI MPYPKELEEQAVLRNGIQVMLRPILPEDEPKHLAFDNSLTDEDRYKRYFGARQRMTHEEMAVLTQIDYAREMAFIATAQD ANGEDYTLGAVRASIDPDNTEAEFAMAVRSDHQGLGLGKLLLEKLIRYYQANETQVLTGFTMIENRNMANLARTLGFTVT FDMEEHLIKMHMDLKAISPKNGVDNDLHAT
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=895, Percent_Identity=51.5083798882682, Blast_Score=914, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 98805; Mature: 98674
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRTLNTLFKPSSIAIIGASNGPRRAGNVVMKNLLAGGFSGPIMPVTPKYQAVMGVLAY CCCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHC PSIEALPIKPDLAIICTRASRVPGIVETLAQFGCKVAIIMASGMANEMDGEGQSLLATTL CCCCEEECCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHH ANAKRYGMRILGPNSLGMMLPNLGLNASLAHTSAQPGKIAFVSQSAAVCTTVLDWANNKG HHHHHCCEEEECCCCHHHHCCCCCCCCEECCCCCCCCEEEEEECCHHHHHHHHHHCCCCC IGFSSFISLGDATDIDFDELLDFLGRDGRTSAIMLYMDAINEKRHFLSAARAAARNKPIL CCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEE VIKSGRSQEGARAAKLHTGGVSGSDAVYEAAFRRAGMLRVNDLVEMFAALESLNHGNDLK EEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC GERLGIISNGGGPAVLAVDELISRGGKLAELSEDTCRKLDTVLPKTWSAQNPIDIIGDAD CCEEEEEECCCCCEEEEHHHHHHCCCCEECCCHHHHHHHHHHCCCCCCCCCCCEEECCCH AKRYVDALNILMDSDDADAILVLHSPSALGESELIAEAVADAIKKHPHRSKLNILTNWSG HHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCC ENSAYKARKRFTKAGVATYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSITDKVPHDAGKA CCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH REVMQAALAKGKTVLETYDASAILGAYGLNTIDTWFAKDAAEAADIAEQVGYPIALKIQS HHHHHHHHHCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC PDILHKSDVYGVTLNLTSADEIHHAAMAMMQRVHQSNPEAKIEGLIVQRMALTAGAQELR CCCEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHEE LAVISDPVFGPAICLGEGGSEWQPTRDAAVALPPLNMALARYMVIQALKTGKLRDRHLPQ EEEECCCCCCCEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCC GLDMHALCLMLTQLSHLVIDCPQIQALDLNPVLAAGDKITLLDINLRLDPQCSDNTNRLA CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCEEEEEEEEEEECCCCCCCCCEEE IMPYPKELEEQAVLRNGIQVMLRPILPEDEPKHLAFDNSLTDEDRYKRYFGARQRMTHEE EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCHHH MAVLTQIDYAREMAFIATAQDANGEDYTLGAVRASIDPDNTEAEFAMAVRSDHQGLGLGK HHHHHHHHHHHHEEEEEEECCCCCCCEEEEEEEEECCCCCCCHHEEEEECCCCCCCCHHH LLLEKLIRYYQANETQVLTGFTMIENRNMANLARTLGFTVTFDMEEHLIKMHMDLKAISP HHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCEEEECHHHHHHHHHHCCEECCC KNGVDNDLHAT CCCCCCCCCCC >Mature Secondary Structure SQRTLNTLFKPSSIAIIGASNGPRRAGNVVMKNLLAGGFSGPIMPVTPKYQAVMGVLAY CCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHC PSIEALPIKPDLAIICTRASRVPGIVETLAQFGCKVAIIMASGMANEMDGEGQSLLATTL CCCCEEECCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHH ANAKRYGMRILGPNSLGMMLPNLGLNASLAHTSAQPGKIAFVSQSAAVCTTVLDWANNKG HHHHHCCEEEECCCCHHHHCCCCCCCCEECCCCCCCCEEEEEECCHHHHHHHHHHCCCCC IGFSSFISLGDATDIDFDELLDFLGRDGRTSAIMLYMDAINEKRHFLSAARAAARNKPIL CCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEE VIKSGRSQEGARAAKLHTGGVSGSDAVYEAAFRRAGMLRVNDLVEMFAALESLNHGNDLK EEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC GERLGIISNGGGPAVLAVDELISRGGKLAELSEDTCRKLDTVLPKTWSAQNPIDIIGDAD CCEEEEEECCCCCEEEEHHHHHHCCCCEECCCHHHHHHHHHHCCCCCCCCCCCEEECCCH AKRYVDALNILMDSDDADAILVLHSPSALGESELIAEAVADAIKKHPHRSKLNILTNWSG HHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCC ENSAYKARKRFTKAGVATYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSITDKVPHDAGKA CCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH REVMQAALAKGKTVLETYDASAILGAYGLNTIDTWFAKDAAEAADIAEQVGYPIALKIQS HHHHHHHHHCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC PDILHKSDVYGVTLNLTSADEIHHAAMAMMQRVHQSNPEAKIEGLIVQRMALTAGAQELR CCCEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHEE LAVISDPVFGPAICLGEGGSEWQPTRDAAVALPPLNMALARYMVIQALKTGKLRDRHLPQ EEEECCCCCCCEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCC GLDMHALCLMLTQLSHLVIDCPQIQALDLNPVLAAGDKITLLDINLRLDPQCSDNTNRLA CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCEEEEEEEEEEECCCCCCCCCEEE IMPYPKELEEQAVLRNGIQVMLRPILPEDEPKHLAFDNSLTDEDRYKRYFGARQRMTHEE EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCHHH MAVLTQIDYAREMAFIATAQDANGEDYTLGAVRASIDPDNTEAEFAMAVRSDHQGLGLGK HHHHHHHHHHHHEEEEEEECCCCCCCEEEEEEEEECCCCCCCHHEEEEECCCCCCCCHHH LLLEKLIRYYQANETQVLTGFTMIENRNMANLARTLGFTVTFDMEEHLIKMHMDLKAISP HHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCEEEECHHHHHHHHHHCCEECCC KNGVDNDLHAT CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]