The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774836

Identifier: 119774836

GI number: 119774836

Start: 2080955

End: 2082121

Strand: Reverse

Name: 119774836

Synonym: Sama_1700

Alternate gene names: NA

Gene position: 2082121-2080955 (Counterclockwise)

Preceding gene: 119774837

Following gene: 119774835

Centisome position: 48.35

GC content: 51.67

Gene sequence:

>1167_bases
ATGACCAGTCCTAAATCCAGCCACTGGGACATCTTTTGTGCCGTTGTCGATAACTACGGTGATATTGGCGTTACCTGGCG
CCTCTCAAAACAATTGGCACGGGAATATCAGCTGCCCATAGTGCTTTGGGTGGATGACCTCAAAAGCTTTGCGCATATAT
TGCCCACGCTTAACCCAACCCTTGGCTCGCAAACCCTCGAAGGCGTCACCATCAATCAGTGGAATATGCCGCTGAACATC
GATTACACCCCAGGCGCCGTGCTGATTGAAGCCTTCGCCTGTGAATTACCTGACGAGGTCAAGGCCATAGCAAAATGCGC
GCCCACACCACCGCTTTGGCTCAATCTTGAGTACCTGAGCGCAGAAGACTGGGTCGACGGTTGCCATGGGCTGCCCTCAT
TACAAAGCGGCGGCATCAACAAATACTTTTATATGCCCGGTTTTTCTGCCGCGAGCGGTGGTCTGATTTGCGAAAAGTCT
CTCTTTGATGAAAGGGATGCCTGGCAGGCCGACAGTGCCAACAAGCTCACTCTTTTTAGAAGCCTGGGGCTGAGTGGCAT
CAAAGCGGATGACAAGATCGTCAGTCTCTTCAGCTATGAAACCCTGGCACTGGAGGGCCTCTGTGCCCGTTGGCAAGCCT
CATCGAGCCCAGTGCATCTGCTGGTGCCCAAGGGACGCAGCCTGAACAGTTTGGCATCGTATCTGCCCAAAGCCCCTGCC
GATATCGCAGCTGGTGAGCAGTTTTGTCAGGGTGCTCTTACCATCCACATACTGCCGATGACAGATCAAACCGGCTATGA
TCGCCTGCTTTGGAGCGCCGATTTTAACATCATACGGGGCGAAGACTCCTTTTTACGGGCACAATGGGCGGGCCGTCCCT
TTATTTGGCACATTTACCAGCAGGAAGAAGACTACCACCTGGTAAAATTAGAAGCTTTTATGCGCCTTTACTGCGATAAT
CTGGCACCTGAGATTGCAGATTGCTGGAAAAACTTGAACCTTGCGTTCAATCAGCAACAGGCGGATGCCGTGCAGCAGCA
CTGGCAAAATATCGAATCTTTCGCTTTGCCTTTGTTGGCACACGCCAAACAATGGCCAATCGATGCACTTAAGACGACAG
ATCTGGCAACCAGGCTAGTGCAATTCGTCAAAAAATCGTTAAGATAG

Upstream 100 bases:

>100_bases
TCTGGCCGAGTTGGCAGACTGATTTCTTGAAGTTTGAAAAGGCGGCGTTTACGCCGCTTTTTTCATTTCCGCGCCAACCG
AATTCGGGTCTCAAGCGTCT

Downstream 100 bases:

>100_bases
CGCCTTAAAGTTAAACGTCCAAGATATAGGAAATTAGTAATGAAAACTGCTCATGAAATCCGTCCCGGTAACGTGATCAT
GTTTAACGACAGCCCATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTSPKSSHWDIFCAVVDNYGDIGVTWRLSKQLAREYQLPIVLWVDDLKSFAHILPTLNPTLGSQTLEGVTINQWNMPLNI
DYTPGAVLIEAFACELPDEVKAIAKCAPTPPLWLNLEYLSAEDWVDGCHGLPSLQSGGINKYFYMPGFSAASGGLICEKS
LFDERDAWQADSANKLTLFRSLGLSGIKADDKIVSLFSYETLALEGLCARWQASSSPVHLLVPKGRSLNSLASYLPKAPA
DIAAGEQFCQGALTIHILPMTDQTGYDRLLWSADFNIIRGEDSFLRAQWAGRPFIWHIYQQEEDYHLVKLEAFMRLYCDN
LAPEIADCWKNLNLAFNQQQADAVQQHWQNIESFALPLLAHAKQWPIDALKTTDLATRLVQFVKKSLR

Sequences:

>Translated_388_residues
MTSPKSSHWDIFCAVVDNYGDIGVTWRLSKQLAREYQLPIVLWVDDLKSFAHILPTLNPTLGSQTLEGVTINQWNMPLNI
DYTPGAVLIEAFACELPDEVKAIAKCAPTPPLWLNLEYLSAEDWVDGCHGLPSLQSGGINKYFYMPGFSAASGGLICEKS
LFDERDAWQADSANKLTLFRSLGLSGIKADDKIVSLFSYETLALEGLCARWQASSSPVHLLVPKGRSLNSLASYLPKAPA
DIAAGEQFCQGALTIHILPMTDQTGYDRLLWSADFNIIRGEDSFLRAQWAGRPFIWHIYQQEEDYHLVKLEAFMRLYCDN
LAPEIADCWKNLNLAFNQQQADAVQQHWQNIESFALPLLAHAKQWPIDALKTTDLATRLVQFVKKSLR
>Mature_387_residues
TSPKSSHWDIFCAVVDNYGDIGVTWRLSKQLAREYQLPIVLWVDDLKSFAHILPTLNPTLGSQTLEGVTINQWNMPLNID
YTPGAVLIEAFACELPDEVKAIAKCAPTPPLWLNLEYLSAEDWVDGCHGLPSLQSGGINKYFYMPGFSAASGGLICEKSL
FDERDAWQADSANKLTLFRSLGLSGIKADDKIVSLFSYETLALEGLCARWQASSSPVHLLVPKGRSLNSLASYLPKAPAD
IAAGEQFCQGALTIHILPMTDQTGYDRLLWSADFNIIRGEDSFLRAQWAGRPFIWHIYQQEEDYHLVKLEAFMRLYCDNL
APEIADCWKNLNLAFNQQQADAVQQHWQNIESFALPLLAHAKQWPIDALKTTDLATRLVQFVKKSLR

Specific function: Unknown

COG id: COG4394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43523; Mature: 43392

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPKSSHWDIFCAVVDNYGDIGVTWRLSKQLAREYQLPIVLWVDDLKSFAHILPTLNPT
CCCCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCC
LGSQTLEGVTINQWNMPLNIDYTPGAVLIEAFACELPDEVKAIAKCAPTPPLWLNLEYLS
CCCCCCCCEEEECCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEEC
AEDWVDGCHGLPSLQSGGINKYFYMPGFSAASGGLICEKSLFDERDAWQADSANKLTLFR
CHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEHHHCCCCCCCCCCCCCEEEEEH
SLGLSGIKADDKIVSLFSYETLALEGLCARWQASSSPVHLLVPKGRSLNSLASYLPKAPA
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCCCCC
DIAAGEQFCQGALTIHILPMTDQTGYDRLLWSADFNIIRGEDSFLRAQWAGRPFIWHIYQ
HHHCCHHHHCCCEEEEEEECCCCCCCCCEEEECCCEEEECCCCEEEHHCCCCCEEEEEEE
QEEDYHLVKLEAFMRLYCDNLAPEIADCWKNLNLAFNQQQADAVQQHWQNIESFALPLLA
CCCCCEEEHHHHHHHHHHHHCCHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHH
HAKQWPIDALKTTDLATRLVQFVKKSLR
HCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSPKSSHWDIFCAVVDNYGDIGVTWRLSKQLAREYQLPIVLWVDDLKSFAHILPTLNPT
CCCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCC
LGSQTLEGVTINQWNMPLNIDYTPGAVLIEAFACELPDEVKAIAKCAPTPPLWLNLEYLS
CCCCCCCCEEEECCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEEC
AEDWVDGCHGLPSLQSGGINKYFYMPGFSAASGGLICEKSLFDERDAWQADSANKLTLFR
CHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEHHHCCCCCCCCCCCCCEEEEEH
SLGLSGIKADDKIVSLFSYETLALEGLCARWQASSSPVHLLVPKGRSLNSLASYLPKAPA
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCCCCC
DIAAGEQFCQGALTIHILPMTDQTGYDRLLWSADFNIIRGEDSFLRAQWAGRPFIWHIYQ
HHHCCHHHHCCCEEEEEEECCCCCCCCCEEEECCCEEEECCCCEEEHHCCCCCEEEEEEE
QEEDYHLVKLEAFMRLYCDNLAPEIADCWKNLNLAFNQQQADAVQQHWQNIESFALPLLA
CCCCCEEEHHHHHHHHHHHHCCHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHH
HAKQWPIDALKTTDLATRLVQFVKKSLR
HCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA