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The map label for this gene is efp

Identifier: 119774835

GI number: 119774835

Start: 2080349

End: 2080915

Strand: Reverse

Name: efp

Synonym: Sama_1699

Alternate gene names: 119774835

Gene position: 2080915-2080349 (Counterclockwise)

Preceding gene: 119774836

Following gene: 119774833

Centisome position: 48.32

GC content: 48.85

Gene sequence:

>567_bases
ATGAAAACTGCTCATGAAATCCGTCCCGGTAACGTGATCATGTTTAACGACAGCCCATGGGTTGTTCAGAAGACTGAAAC
CACCCGTTCAGGCCGTAACGCTGCCATCGTTAAGATGAAGCTGAAAAACCTGCTGATCGACTCTTCTACCGAGACCACCT
TCAAGGGTGAAGACAAGATGGACGTTATCGTTCTGGAGCGTCTGGATTGCACCTACTCTTACTTCGCTGATCCAATGTAC
GTATTCATGGATTCCGAGTACAACCAGTACGACGTTGAAGCAGAAAACGTGGGTGACGCTGCCAAGTACATCGTTGATGG
CATGGAAGAAACCTGCCAGGTAACCTTCTACGAAGGCAAGGCCATTTCTGTTGAAATGCCAACCACCATCATCCGTGAAG
TTGGCTACACTGAGCCAGCTGCCCGTGGTGACACTTCCGGTAAAGTAATGAAGCCTGCCAAACTGGTTGGCAGCGACATC
GAACTGATGGTTGCTGACTTCGTTAAAGAAGGCGACAAAATCGAAATCGACACCCGTACCGGTGAATTCAAGAAGCGCGT
AAACTAA

Upstream 100 bases:

>100_bases
ACTTAAGACGACAGATCTGGCAACCAGGCTAGTGCAATTCGTCAAAAAATCGTTAAGATAGCGCCTTAAAGTTAAACGTC
CAAGATATAGGAAATTAGTA

Downstream 100 bases:

>100_bases
TCGCCCTTCTATGAGTTAAAAGCCAGCCCCGTGCTGGCTTTTTTGTTGCCTGAAATCCAAATTACCGGACGCACTCCATT
CAGCTGACATTCTCCCCCTA

Product: elongation factor P

Products: NA

Alternate protein names: EF-P

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKTAHEIRPGNVIMFNDSPWVVQKTETTRSGRNAAIVKMKLKNLLIDSSTETTFKGEDKMDVIVLERLDCTYSYFADPMY
VFMDSEYNQYDVEAENVGDAAKYIVDGMEETCQVTFYEGKAISVEMPTTIIREVGYTEPAARGDTSGKVMKPAKLVGSDI
ELMVADFVKEGDKIEIDTRTGEFKKRVN

Sequences:

>Translated_188_residues
MKTAHEIRPGNVIMFNDSPWVVQKTETTRSGRNAAIVKMKLKNLLIDSSTETTFKGEDKMDVIVLERLDCTYSYFADPMY
VFMDSEYNQYDVEAENVGDAAKYIVDGMEETCQVTFYEGKAISVEMPTTIIREVGYTEPAARGDTSGKVMKPAKLVGSDI
ELMVADFVKEGDKIEIDTRTGEFKKRVN
>Mature_188_residues
MKTAHEIRPGNVIMFNDSPWVVQKTETTRSGRNAAIVKMKLKNLLIDSSTETTFKGEDKMDVIVLERLDCTYSYFADPMY
VFMDSEYNQYDVEAENVGDAAKYIVDGMEETCQVTFYEGKAISVEMPTTIIREVGYTEPAARGDTSGKVMKPAKLVGSDI
ELMVADFVKEGDKIEIDTRTGEFKKRVN

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family

Homologues:

Organism=Escherichia coli, GI1790590, Length=185, Percent_Identity=34.0540540540541, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI87082061, Length=191, Percent_Identity=27.2251308900524, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: 1600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): EFP_SHEAM (A1S699)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_927575.1
- ProteinModelPortal:   A1S699
- SMR:   A1S699
- STRING:   A1S699
- GeneID:   4603950
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_1699
- NMPDR:   fig|326297.7.peg.1608
- eggNOG:   COG0231
- HOGENOM:   HBG303311
- OMA:   MISSNDF
- ProtClustDB:   PRK00529
- GO:   GO:0005737
- HAMAP:   MF_00141
- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.40.50.140
- Gene3D:   G3DSA:2.30.30.30
- PIRSF:   PIRSF005901
- SMART:   SM00841
- TIGRFAMs:   TIGR00038

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C; SSF50249 Nucleic_acid_OB; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 21185; Mature: 21185

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAHEIRPGNVIMFNDSPWVVQKTETTRSGRNAAIVKMKLKNLLIDSSTETTFKGEDKM
CCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEEEEEHHHEECCCCCCEECCCCCE
DVIVLERLDCTYSYFADPMYVFMDSEYNQYDVEAENVGDAAKYIVDGMEETCQVTFYEGK
EEEEEEECCCCHHHHCCEEEEEECCCCCEEECCHHCCCHHHHHHHHCCCCEEEEEEECCE
AISVEMPTTIIREVGYTEPAARGDTSGKVMKPAKLVGSDIELMVADFVKEGDKIEIDTRT
EEEEECCHHHHHHCCCCCCCCCCCCCCCEECCHHHCCCCHHHHHHHHHCCCCEEEEECCC
GEFKKRVN
CCHHHCCC
>Mature Secondary Structure
MKTAHEIRPGNVIMFNDSPWVVQKTETTRSGRNAAIVKMKLKNLLIDSSTETTFKGEDKM
CCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEEEEEHHHEECCCCCCEECCCCCE
DVIVLERLDCTYSYFADPMYVFMDSEYNQYDVEAENVGDAAKYIVDGMEETCQVTFYEGK
EEEEEEECCCCHHHHCCEEEEEECCCCCEEECCHHCCCHHHHHHHHCCCCEEEEEEECCE
AISVEMPTTIIREVGYTEPAARGDTSGKVMKPAKLVGSDIELMVADFVKEGDKIEIDTRT
EEEEECCHHHHHHCCCCCCCCCCCCCCCEECCHHHCCCCHHHHHHHHHCCCCEEEEECCC
GEFKKRVN
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA