| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is crr [H]
Identifier: 119774785
GI number: 119774785
Start: 2013924
End: 2014433
Strand: Reverse
Name: crr [H]
Synonym: Sama_1649
Alternate gene names: 119774785
Gene position: 2014433-2013924 (Counterclockwise)
Preceding gene: 119774786
Following gene: 119774784
Centisome position: 46.78
GC content: 55.69
Gene sequence:
>510_bases ATGGGATTTTTCAGCCGAATTCGGCGACTGATTTCCGGGGCGCCAACCATTGAAGGTGGCATTGCCATACTCGCGCCGGT TTCCGGCGAGATTTATCCCATAGAGAAGGTGCCCGACGTGGTGTTTGCCGAGAAAATCGTCGGTGACGGCATAGCCATTG CCCCAGAGGGAGACACCATCTACGCCCCCATTGACGGCACCATAGGCAAAATTTTCGAGACCAACCATGCCTTCAGTATC GAGTCCCCCCAGGGGCTGGAGTTGTTTGTACACTTTGGTGTGGGCACGGTGGAACTCAGGGGCAACGGCTTTAAACGTCT CGCCGAAGAAGGCCAGCAGGTGAAGGCTGGCGATCCCATACTGGCGTTCGATTTGGAATACCTTCGCGAACACGCCGATA GCCTGCTTACCCCCGTGGTGCTGGCGAACATGGAAGACATCAAGTACCTGGAGAAATCCCAGGGCCGGGTCGAAGCCGGC AAAGACGTGATATTTACCGTCGAAATCTGA
Upstream 100 bases:
>100_bases TCGATGCCTGTATAAGTAGCTATAAATAAGCTAAATGTTTCAGTATGATGTATTTTTCGCTGACGCCAAGATCAGCCTAT AAACCAAGGGGTACGCAGTC
Downstream 100 bases:
>100_bases AATTCATTCACAGGGGTCGCGAGGCACTTGAGGGGCGTAATCCCCCATGCCACAATGCGGCCCTTTCCTTTTGCAGATGG AGCGCCCCAGTGACACTCTT
Product: PTS system glucose-specific transporter subunit
Products: protein histidine; sugar phosphate
Alternate protein names: EIIA-Glc; EIII-Glc; PTS system glucose-specific EIIA component [H]
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MGFFSRIRRLISGAPTIEGGIAILAPVSGEIYPIEKVPDVVFAEKIVGDGIAIAPEGDTIYAPIDGTIGKIFETNHAFSI ESPQGLELFVHFGVGTVELRGNGFKRLAEEGQQVKAGDPILAFDLEYLREHADSLLTPVVLANMEDIKYLEKSQGRVEAG KDVIFTVEI
Sequences:
>Translated_169_residues MGFFSRIRRLISGAPTIEGGIAILAPVSGEIYPIEKVPDVVFAEKIVGDGIAIAPEGDTIYAPIDGTIGKIFETNHAFSI ESPQGLELFVHFGVGTVELRGNGFKRLAEEGQQVKAGDPILAFDLEYLREHADSLLTPVVLANMEDIKYLEKSQGRVEAG KDVIFTVEI >Mature_168_residues GFFSRIRRLISGAPTIEGGIAILAPVSGEIYPIEKVPDVVFAEKIVGDGIAIAPEGDTIYAPIDGTIGKIFETNHAFSIE SPQGLELFVHFGVGTVELRGNGFKRLAEEGQQVKAGDPILAFDLEYLREHADSLLTPVVLANMEDIKYLEKSQGRVEAGK DVIFTVEI
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG2190
COG function: function code G; Phosphotransferase system IIA components
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788757, Length=161, Percent_Identity=63.3540372670807, Blast_Score=205, Evalue=2e-54, Organism=Escherichia coli, GI1786894, Length=147, Percent_Identity=46.2585034013605, Blast_Score=145, Evalue=1e-36, Organism=Escherichia coli, GI1790159, Length=151, Percent_Identity=36.4238410596026, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: 3540 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 140 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR001127 [H]
Pfam domain/function: PF00358 PTS_EIIA_1 [H]
EC number: 2.7.1.69
Molecular weight: Translated: 18300; Mature: 18169
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFSRIRRLISGAPTIEGGIAILAPVSGEIYPIEKVPDVVFAEKIVGDGIAIAPEGDTI CCHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEHHHCCCHHHHHHHHCCCEEECCCCCEE YAPIDGTIGKIFETNHAFSIESPQGLELFVHFGVGTVELRGNGFKRLAEEGQQVKAGDPI EEECCCCCCCEEECCCEEEECCCCCEEEEEEECCEEEEECCCCHHHHHHCCCEECCCCCE LAFDLEYLREHADSLLTPVVLANMEDIKYLEKSQGRVEAGKDVIFTVEI EEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEEC >Mature Secondary Structure GFFSRIRRLISGAPTIEGGIAILAPVSGEIYPIEKVPDVVFAEKIVGDGIAIAPEGDTI CHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEHHHCCCHHHHHHHHCCCEEECCCCCEE YAPIDGTIGKIFETNHAFSIESPQGLELFVHFGVGTVELRGNGFKRLAEEGQQVKAGDPI EEECCCCCCCEEECCCEEEECCCCCEEEEEEECCEEEEECCCCHHHHHHCCCEECCCCCE LAFDLEYLREHADSLLTPVVLANMEDIKYLEKSQGRVEAGKDVIFTVEI EEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]