Click here to switch to the map view.

The map label for this gene is yffB [H]

Identifier: 119774784

GI number: 119774784

Start: 2013490

End: 2013834

Strand: Reverse

Name: yffB [H]

Synonym: Sama_1648

Alternate gene names: 119774784

Gene position: 2013834-2013490 (Counterclockwise)

Preceding gene: 119774785

Following gene: 119774783

Centisome position: 46.77

GC content: 51.59

Gene sequence:

>345_bases
GTGACACTCTTTGGCATTAAAAATTGCGACACCGTGAAAAAGGCCCGCAAGTGGCTGGAAGCCAATGGCCATAACGTCCC
TTTCCATGATTTTCGTGTTGACGGTCTACCGGCCGAGCAGCTGAATGACTGGGTTGCACGCATTGGATTTGAGCCGCTGC
TCAATAAAAAATCCACCAGTTTTCGCGCACTGACTGACGAGCAAAAGCAGGACATAGACACAGCCAAGGCCATTGCGCTG
ATGCTGGAGTACCCCACACTCATCAAGAGGCCGGTGCTGGTAAAAGGCGACACCGTGTACACAGGCTTTAACGACAAGCT
GTACAGCGAGGTATTTGGCCAATGA

Upstream 100 bases:

>100_bases
TCGAAATCTGAAATTCATTCACAGGGGTCGCGAGGCACTTGAGGGGCGTAATCCCCCATGCCACAATGCGGCCCTTTCCT
TTTGCAGATGGAGCGCCCCA

Downstream 100 bases:

>100_bases
GTAGCCCAGAAACCCACAGTGATGTGATTGAACTGACGCGCGAGCTCATTTCACGCCCGTCTGTCACCCCGCTTGATGAA
GGCTGTCAGGACCTGATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MTLFGIKNCDTVKKARKWLEANGHNVPFHDFRVDGLPAEQLNDWVARIGFEPLLNKKSTSFRALTDEQKQDIDTAKAIAL
MLEYPTLIKRPVLVKGDTVYTGFNDKLYSEVFGQ

Sequences:

>Translated_114_residues
MTLFGIKNCDTVKKARKWLEANGHNVPFHDFRVDGLPAEQLNDWVARIGFEPLLNKKSTSFRALTDEQKQDIDTAKAIAL
MLEYPTLIKRPVLVKGDTVYTGFNDKLYSEVFGQ
>Mature_113_residues
TLFGIKNCDTVKKARKWLEANGHNVPFHDFRVDGLPAEQLNDWVARIGFEPLLNKKSTSFRALTDEQKQDIDTAKAIALM
LEYPTLIKRPVLVKGDTVYTGFNDKLYSEVFGQ

Specific function: Unknown

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family [H]

Homologues:

Organism=Escherichia coli, GI1788815, Length=116, Percent_Identity=50.8620689655172, Blast_Score=120, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335
- InterPro:   IPR006504 [H]

Pfam domain/function: PF03960 ArsC [H]

EC number: NA

Molecular weight: Translated: 12989; Mature: 12858

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLFGIKNCDTVKKARKWLEANGHNVPFHDFRVDGLPAEQLNDWVARIGFEPLLNKKSTS
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHCCCHHHCCCCCCC
FRALTDEQKQDIDTAKAIALMLEYPTLIKRPVLVKGDTVYTGFNDKLYSEVFGQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEECCCHHHHHHHHCC
>Mature Secondary Structure 
TLFGIKNCDTVKKARKWLEANGHNVPFHDFRVDGLPAEQLNDWVARIGFEPLLNKKSTS
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHCCCHHHCCCCCCC
FRALTDEQKQDIDTAKAIALMLEYPTLIKRPVLVKGDTVYTGFNDKLYSEVFGQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1644752; 9205837; 9278503; 10493123 [H]