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The map label for this gene is yebS [H]

Identifier: 119774718

GI number: 119774718

Start: 1925640

End: 1926287

Strand: Reverse

Name: yebS [H]

Synonym: Sama_1581

Alternate gene names: 119774718

Gene position: 1926287-1925640 (Counterclockwise)

Preceding gene: 119774742

Following gene: 119774717

Centisome position: 44.73

GC content: 51.08

Gene sequence:

>648_bases
ATGGATCTGCAATACGCTTCTATGCATCATGACGATATCGACAATTCGGTGATTCTCTGCCGTGCCTGTGATTTGGCCGT
GCGACGCCGCGCCTTGCCCAGTGGCGTCAGGGCGCTGTGCCCCCGTTGTCATACAGCGCTGTATGACACCCCCTTCTGCT
CTATCAATGGGATGTTGGCGCTCTGCGTATCTGCACTGGCACTGTTTTTACCTGCCAATTTGTTTCCCGTTCTCGAATTA
CATTTTTTAGGCTCGGTGCGCACCGCAACCGTCATTCAGGGCGCCATGGCGGTCATGGATCTCGGCTACTGGGTGGTGGG
CATTGCCGTGCTTGTTGCCGCGGTTATAGGCCCGGGGTTATTGCTGCTGTCAATCTTGTCACAGGTCCTGCTGGTCAAGA
TGGGACTCAACCCCGGGTGGCAAAGGGATCTGTATAAGTGGTTATTGCGTCGTCATGGATTATTCAGCCAGCTCACCATG
CTCGAAATTTATGTGATTAGTTTTTTGGTTTCAGCATTTCAATTATCTGACTTCTCAGATATTTATTTTGGTGTGGGTAC
CTTTTCGTTCACCATGCTGTTTCTGGTGACCCTGTTTTTGCAGCGGGAATACAATATCGAGCACATGTGGAGCCGCCTGA
ATGACTGA

Upstream 100 bases:

>100_bases
GGGATGCAAGTGTTTAACATGATCTGATACACTCGTACGCTGAAACCGCCTCCAGGGGAGGCAGAATCAGGCATCACCCC
GGCTGGGGAACCTGTCATCC

Downstream 100 bases:

>100_bases
CAATGTCCAGACCACCGGCAAACAAATGGGCCTGTGTCTTTGTCCGGTATGTAAGAAAACCAATCCGGAAGATGCCCAGA
CTTGCAGCCGCTGCGGAGCA

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MDLQYASMHHDDIDNSVILCRACDLAVRRRALPSGVRALCPRCHTALYDTPFCSINGMLALCVSALALFLPANLFPVLEL
HFLGSVRTATVIQGAMAVMDLGYWVVGIAVLVAAVIGPGLLLLSILSQVLLVKMGLNPGWQRDLYKWLLRRHGLFSQLTM
LEIYVISFLVSAFQLSDFSDIYFGVGTFSFTMLFLVTLFLQREYNIEHMWSRLND

Sequences:

>Translated_215_residues
MDLQYASMHHDDIDNSVILCRACDLAVRRRALPSGVRALCPRCHTALYDTPFCSINGMLALCVSALALFLPANLFPVLEL
HFLGSVRTATVIQGAMAVMDLGYWVVGIAVLVAAVIGPGLLLLSILSQVLLVKMGLNPGWQRDLYKWLLRRHGLFSQLTM
LEIYVISFLVSAFQLSDFSDIYFGVGTFSFTMLFLVTLFLQREYNIEHMWSRLND
>Mature_215_residues
MDLQYASMHHDDIDNSVILCRACDLAVRRRALPSGVRALCPRCHTALYDTPFCSINGMLALCVSALALFLPANLFPVLEL
HFLGSVRTATVIQGAMAVMDLGYWVVGIAVLVAAVIGPGLLLLSILSQVLLVKMGLNPGWQRDLYKWLLRRHGLFSQLTM
LEIYVISFLVSAFQLSDFSDIYFGVGTFSFTMLFLVTLFLQREYNIEHMWSRLND

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=193, Percent_Identity=27.979274611399, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787183, Length=185, Percent_Identity=24.8648648648649, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 24109; Mature: 24109

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLQYASMHHDDIDNSVILCRACDLAVRRRALPSGVRALCPRCHTALYDTPFCSINGMLA
CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCHHH
LCVSALALFLPANLFPVLELHFLGSVRTATVIQGAMAVMDLGYWVVGIAVLVAAVIGPGL
HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLSILSQVLLVKMGLNPGWQRDLYKWLLRRHGLFSQLTMLEIYVISFLVSAFQLSDFSD
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
IYFGVGTFSFTMLFLVTLFLQREYNIEHMWSRLND
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MDLQYASMHHDDIDNSVILCRACDLAVRRRALPSGVRALCPRCHTALYDTPFCSINGMLA
CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCHHH
LCVSALALFLPANLFPVLELHFLGSVRTATVIQGAMAVMDLGYWVVGIAVLVAAVIGPGL
HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLSILSQVLLVKMGLNPGWQRDLYKWLLRRHGLFSQLTMLEIYVISFLVSAFQLSDFSD
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
IYFGVGTFSFTMLFLVTLFLQREYNIEHMWSRLND
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]