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The map label for this gene is yebS [H]

Identifier: 119774717

GI number: 119774717

Start: 1925018

End: 1925647

Strand: Reverse

Name: yebS [H]

Synonym: Sama_1580

Alternate gene names: 119774717

Gene position: 1925647-1925018 (Counterclockwise)

Preceding gene: 119774718

Following gene: 119774716

Centisome position: 44.72

GC content: 50.0

Gene sequence:

>630_bases
ATGACTGACAATGTCCAGACCACCGGCAAACAAATGGGCCTGTGTCTTTGTCCGGTATGTAAGAAAACCAATCCGGAAGA
TGCCCAGACTTGCAGCCGCTGCGGAGCACATAACCAGGCTCGCGATTACTCCAGTGTGCAAAAAAGCTGGGCACTGCTTA
TCACCGCCGCCATTTTACTTATACCCGCCAATGTTTACCCCATCACGACCCTGGTGAATCAGGGTAAAGTGACCCACGAC
ACTATATTCAGCGGTATCAAGCATTTGGTGCATTCTGACATGTTGCCTATTGCCATCATTGTCTTTACCGCGAGTATTCT
GGTGCCCTGGCTGAAAATCATCGGCCTTGCCATCTACCTCTCTGCCATCAGTTTTTCCCTGCCGGTGTCCAAACGCAGAC
TGATGGCAGGCTTTCACATTATTGAGTGGATCGGCCGCTGGTCCATGCTGGATTTATTTGTAATTTCATTAACTGTTGCC
CTGGTGAATATGGGGCAATTGCTGGATGCCAAACCCGCACCGGCAGCGACGGCATTTGCCTTGGTGATTTTGCTGACACA
GCTTGCGGCCAAGGTACTGGATACGCGTTTACTCTGGGATCGACTGGACTTAGAAGATGACAAATATTGA

Upstream 100 bases:

>100_bases
ATTTATTTTGGTGTGGGTACCTTTTCGTTCACCATGCTGTTTCTGGTGACCCTGTTTTTGCAGCGGGAATACAATATCGA
GCACATGTGGAGCCGCCTGA

Downstream 100 bases:

>100_bases
AGCACCCAAGGTAGTCAAAAAGAAACTGTTCTCGCCGGTTTGGCTCCTGCCTCTGGTTGCACTTGCCCTTGCGGCCTGGC
TTGGTATCAAGAGTATTCGG

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MTDNVQTTGKQMGLCLCPVCKKTNPEDAQTCSRCGAHNQARDYSSVQKSWALLITAAILLIPANVYPITTLVNQGKVTHD
TIFSGIKHLVHSDMLPIAIIVFTASILVPWLKIIGLAIYLSAISFSLPVSKRRLMAGFHIIEWIGRWSMLDLFVISLTVA
LVNMGQLLDAKPAPAATAFALVILLTQLAAKVLDTRLLWDRLDLEDDKY

Sequences:

>Translated_209_residues
MTDNVQTTGKQMGLCLCPVCKKTNPEDAQTCSRCGAHNQARDYSSVQKSWALLITAAILLIPANVYPITTLVNQGKVTHD
TIFSGIKHLVHSDMLPIAIIVFTASILVPWLKIIGLAIYLSAISFSLPVSKRRLMAGFHIIEWIGRWSMLDLFVISLTVA
LVNMGQLLDAKPAPAATAFALVILLTQLAAKVLDTRLLWDRLDLEDDKY
>Mature_208_residues
TDNVQTTGKQMGLCLCPVCKKTNPEDAQTCSRCGAHNQARDYSSVQKSWALLITAAILLIPANVYPITTLVNQGKVTHDT
IFSGIKHLVHSDMLPIAIIVFTASILVPWLKIIGLAIYLSAISFSLPVSKRRLMAGFHIIEWIGRWSMLDLFVISLTVAL
VNMGQLLDAKPAPAATAFALVILLTQLAAKVLDTRLLWDRLDLEDDKY

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=203, Percent_Identity=40.8866995073892, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1787183, Length=194, Percent_Identity=37.6288659793814, Blast_Score=131, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 23016; Mature: 22884

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNVQTTGKQMGLCLCPVCKKTNPEDAQTCSRCGAHNQARDYSSVQKSWALLITAAILL
CCCCCCCHHHHCCCCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
IPANVYPITTLVNQGKVTHDTIFSGIKHLVHSDMLPIAIIVFTASILVPWLKIIGLAIYL
HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SAISFSLPVSKRRLMAGFHIIEWIGRWSMLDLFVISLTVALVNMGQLLDAKPAPAATAFA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LVILLTQLAAKVLDTRLLWDRLDLEDDKY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TDNVQTTGKQMGLCLCPVCKKTNPEDAQTCSRCGAHNQARDYSSVQKSWALLITAAILL
CCCCCCHHHHCCCCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
IPANVYPITTLVNQGKVTHDTIFSGIKHLVHSDMLPIAIIVFTASILVPWLKIIGLAIYL
HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SAISFSLPVSKRRLMAGFHIIEWIGRWSMLDLFVISLTVALVNMGQLLDAKPAPAATAFA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LVILLTQLAAKVLDTRLLWDRLDLEDDKY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]