Click here to switch to the map view.

The map label for this gene is dtpB [H]

Identifier: 119774314

GI number: 119774314

Start: 1437930

End: 1439450

Strand: Direct

Name: dtpB [H]

Synonym: Sama_1177

Alternate gene names: 119774314

Gene position: 1437930-1439450 (Clockwise)

Preceding gene: 119774313

Following gene: 119774315

Centisome position: 33.39

GC content: 56.02

Gene sequence:

>1521_bases
ATGACAACAGGGAATACACAGGTCTCCAAGACCCGGTCCTTTATGACGGTGTCGCTGATTGAACTGTGGGAGCGTTTTGG
CTTCTACGGTATGCAGGCGCTGATTGTTTACTTTATGGTTCAGCGCCTTGGCTTTGCCGATGAGCGCGCCAATTTGGTGT
GGAGCGCCTGCGCCGCACTCATTTATGTGGCGCCCGCCATCGGTGGCTGGGTCGGAGACAAGGTGCTCGGCACCAAGCGC
ACCATGCTGCTGGGCGCAGGGATATTGACGCTGGGTTACGCCCTCATGGCCGTGCCGACCGATAATACCTGGTTTTTGTT
CTCAGCCCTCGGGGTTATCGTGGTGGGTAACGGGCTGTTCAAACCCAATGCCGGTAATCTGGTACGCAAAATTTATGATG
GCGACGACTCCAAAATCGACAGTGCCTTCACCATCTATTACATGGCGGTCAACGTAGGTTCGACCTTCTCCATGTTGCTC
ACCCCCTGGATTAAGGACTACGTCAACGCCAACTATGGTGACGGCTTTGGTTGGCACGCCGCCTTTGCTGTGTGTTTCGT
GGGCCTGATTGTCGGTATCGGCAACTACATGATGATGCGCCATACCCTGGATAATTATGGCTCTGAGCCAGACCTGCTGC
CGGTGGACAAGCGCAAGCTTGCGGCTGTATTGGGGGCATCGCTGCTGGCGGTGGTGGTTTCTGCGGTCATACTCGAATTT
GAAGATATCGCCCGGGTATTTGTGTACGGCGCAGGCCTGGTGGTGCTGGGGATCTTTATCCACCTTATCCGCACCAGTGA
AGAGAGCGAGCGGGCAGGGCTGTTAGCCGCGCTGGTACTGACGCTGCAATCTGTGTTCTTTTTTATCTTTTACCAGCAGA
TGTCCACCTCGCTGGCGCTCTTTGCACTGCGAAACGTAGACTGGGACTTTGTGGTGATGGGGCAGCATTTGTGGACCTGG
TCTCCAGCGCAGTTTCAGGCGCTTAATCCCATCTGGATCATGGTGTTAAGCCCAATCCTTGCCTGGGCCTATGCCTGGGG
AGGCAAGCACAACAAGGATATCTCCATTGCCGCCAAGTTTGCCCTGGGGTTTGCCGTGGTGGCCGCAGGCTTCTTTATCT
ACAGTGTGGCCGGAGAGTTTGCCGTAAACGGCAAGACCTCAAGCTGGGTGATGATTTGGGGCTATGGCGCCTATTCGCTG
GGCGAGCTCTTGGTGAGTGGACTGGGCCTTGCCATGATTGCTCGCTATGTGCCCGAGCGCATGGGCGGCTTTATGATGGG
TGCCTACTTTGTGGCAACTGGTATCAGCCAGTATCTGGGCGGTGTGGTGGCCAACTTTGCCAGCGTGCCGCAAGGCATTA
CCAATCCGCTGGAAACCCTGACCATCTATACCAGCCTGTTTAATAAGCTGGGTTTTGCGGCCCTGGGGTGCACCCTGATT
GCACTGGCGGTATTGCCGCTGATGCGCCGTTTAACCGAGACGCACCATAGCCACAACGGCAGTGACCAGGTCGGTGCCTG
A

Upstream 100 bases:

>100_bases
TGTTTTTGCTTTACAAGTGAACAAATTCTGATTGGTTTGCCGCCATGCTCCCCCTATACTCGGGCTGGATCACAACAATA
ATCAAGATGGGAATTTGGCT

Downstream 100 bases:

>100_bases
TAAGGCGTTTTGAGGGGATACGGCTTGTTGACCCAGAGATGTATGAATAGCGCCGCCTCGTGCGGCGCTTTTGTTCTGAT
AAAGGAGTGTCCATGAGGAT

Product: proton-dependent oligopeptide transporter (POT) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MTTGNTQVSKTRSFMTVSLIELWERFGFYGMQALIVYFMVQRLGFADERANLVWSACAALIYVAPAIGGWVGDKVLGTKR
TMLLGAGILTLGYALMAVPTDNTWFLFSALGVIVVGNGLFKPNAGNLVRKIYDGDDSKIDSAFTIYYMAVNVGSTFSMLL
TPWIKDYVNANYGDGFGWHAAFAVCFVGLIVGIGNYMMMRHTLDNYGSEPDLLPVDKRKLAAVLGASLLAVVVSAVILEF
EDIARVFVYGAGLVVLGIFIHLIRTSEESERAGLLAALVLTLQSVFFFIFYQQMSTSLALFALRNVDWDFVVMGQHLWTW
SPAQFQALNPIWIMVLSPILAWAYAWGGKHNKDISIAAKFALGFAVVAAGFFIYSVAGEFAVNGKTSSWVMIWGYGAYSL
GELLVSGLGLAMIARYVPERMGGFMMGAYFVATGISQYLGGVVANFASVPQGITNPLETLTIYTSLFNKLGFAALGCTLI
ALAVLPLMRRLTETHHSHNGSDQVGA

Sequences:

>Translated_506_residues
MTTGNTQVSKTRSFMTVSLIELWERFGFYGMQALIVYFMVQRLGFADERANLVWSACAALIYVAPAIGGWVGDKVLGTKR
TMLLGAGILTLGYALMAVPTDNTWFLFSALGVIVVGNGLFKPNAGNLVRKIYDGDDSKIDSAFTIYYMAVNVGSTFSMLL
TPWIKDYVNANYGDGFGWHAAFAVCFVGLIVGIGNYMMMRHTLDNYGSEPDLLPVDKRKLAAVLGASLLAVVVSAVILEF
EDIARVFVYGAGLVVLGIFIHLIRTSEESERAGLLAALVLTLQSVFFFIFYQQMSTSLALFALRNVDWDFVVMGQHLWTW
SPAQFQALNPIWIMVLSPILAWAYAWGGKHNKDISIAAKFALGFAVVAAGFFIYSVAGEFAVNGKTSSWVMIWGYGAYSL
GELLVSGLGLAMIARYVPERMGGFMMGAYFVATGISQYLGGVVANFASVPQGITNPLETLTIYTSLFNKLGFAALGCTLI
ALAVLPLMRRLTETHHSHNGSDQVGA
>Mature_505_residues
TTGNTQVSKTRSFMTVSLIELWERFGFYGMQALIVYFMVQRLGFADERANLVWSACAALIYVAPAIGGWVGDKVLGTKRT
MLLGAGILTLGYALMAVPTDNTWFLFSALGVIVVGNGLFKPNAGNLVRKIYDGDDSKIDSAFTIYYMAVNVGSTFSMLLT
PWIKDYVNANYGDGFGWHAAFAVCFVGLIVGIGNYMMMRHTLDNYGSEPDLLPVDKRKLAAVLGASLLAVVVSAVILEFE
DIARVFVYGAGLVVLGIFIHLIRTSEESERAGLLAALVLTLQSVFFFIFYQQMSTSLALFALRNVDWDFVVMGQHLWTWS
PAQFQALNPIWIMVLSPILAWAYAWGGKHNKDISIAAKFALGFAVVAAGFFIYSVAGEFAVNGKTSSWVMIWGYGAYSLG
ELLVSGLGLAMIARYVPERMGGFMMGAYFVATGISQYLGGVVANFASVPQGITNPLETLTIYTSLFNKLGFAALGCTLIA
LAVLPLMRRLTETHHSHNGSDQVGA

Specific function: Proton-dependent permease that transports di- and tripeptides [H]

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4827008, Length=386, Percent_Identity=21.5025906735751, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1789911, Length=499, Percent_Identity=39.8797595190381, Blast_Score=357, Evalue=1e-99,
Organism=Escherichia coli, GI1787922, Length=507, Percent_Identity=36.094674556213, Blast_Score=338, Evalue=4e-94,
Organism=Escherichia coli, GI1786927, Length=490, Percent_Identity=28.9795918367347, Blast_Score=189, Evalue=5e-49,
Organism=Escherichia coli, GI1790572, Length=509, Percent_Identity=29.2730844793713, Blast_Score=187, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71987453, Length=379, Percent_Identity=25.3298153034301, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24639585, Length=192, Percent_Identity=28.125, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24639583, Length=192, Percent_Identity=28.125, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24639581, Length=192, Percent_Identity=28.125, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28571098, Length=340, Percent_Identity=24.1176470588235, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28571102, Length=340, Percent_Identity=23.8235294117647, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28571100, Length=340, Percent_Identity=23.8235294117647, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 55084; Mature: 54953

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGNTQVSKTRSFMTVSLIELWERFGFYGMQALIVYFMVQRLGFADERANLVWSACAAL
CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IYVAPAIGGWVGDKVLGTKRTMLLGAGILTLGYALMAVPTDNTWFLFSALGVIVVGNGLF
HHHHHHHCCHHCCHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHEECCCCC
KPNAGNLVRKIYDGDDSKIDSAFTIYYMAVNVGSTFSMLLTPWIKDYVNANYGDGFGWHA
CCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHH
AFAVCFVGLIVGIGNYMMMRHTLDNYGSEPDLLPVDKRKLAAVLGASLLAVVVSAVILEF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EDIARVFVYGAGLVVLGIFIHLIRTSEESERAGLLAALVLTLQSVFFFIFYQQMSTSLAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALRNVDWDFVVMGQHLWTWSPAQFQALNPIWIMVLSPILAWAYAWGGKHNKDISIAAKF
HHHHCCCCCEEEECCHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
ALGFAVVAAGFFIYSVAGEFAVNGKTSSWVMIWGYGAYSLGELLVSGLGLAMIARYVPER
HHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
MGGFMMGAYFVATGISQYLGGVVANFASVPQGITNPLETLTIYTSLFNKLGFAALGCTLI
HCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALAVLPLMRRLTETHHSHNGSDQVGA
HHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TTGNTQVSKTRSFMTVSLIELWERFGFYGMQALIVYFMVQRLGFADERANLVWSACAAL
CCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IYVAPAIGGWVGDKVLGTKRTMLLGAGILTLGYALMAVPTDNTWFLFSALGVIVVGNGLF
HHHHHHHCCHHCCHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHEECCCCC
KPNAGNLVRKIYDGDDSKIDSAFTIYYMAVNVGSTFSMLLTPWIKDYVNANYGDGFGWHA
CCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHH
AFAVCFVGLIVGIGNYMMMRHTLDNYGSEPDLLPVDKRKLAAVLGASLLAVVVSAVILEF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EDIARVFVYGAGLVVLGIFIHLIRTSEESERAGLLAALVLTLQSVFFFIFYQQMSTSLAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALRNVDWDFVVMGQHLWTWSPAQFQALNPIWIMVLSPILAWAYAWGGKHNKDISIAAKF
HHHHCCCCCEEEECCHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
ALGFAVVAAGFFIYSVAGEFAVNGKTSSWVMIWGYGAYSLGELLVSGLGLAMIARYVPER
HHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
MGGFMMGAYFVATGISQYLGGVVANFASVPQGITNPLETLTIYTSLFNKLGFAALGCTLI
HCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALAVLPLMRRLTETHHSHNGSDQVGA
HHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA