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The map label for this gene is yajD [H]

Identifier: 119774313

GI number: 119774313

Start: 1437410

End: 1437766

Strand: Direct

Name: yajD [H]

Synonym: Sama_1176

Alternate gene names: 119774313

Gene position: 1437410-1437766 (Clockwise)

Preceding gene: 119774312

Following gene: 119774314

Centisome position: 33.38

GC content: 49.86

Gene sequence:

>357_bases
ATGACCCAAAGTAAACTCGATAAGGTATTGGCTGCAGAGCGCGAATACCGTGAAAAACGTGAAGGTGGCTATCGCGAAAA
GGCGCTGAAGCTTTATCCCTGGGTGTGTGGCCGCTGTGCCCGTGAATTTACCCATAAAAACCTGTCGGAACTGACGGTGC
ACCATAGGGACCATAATCACGACAATAACCCGCCTGATGGTTCTAACTGGGAGCTGCTGTGCCTTTACTGCCACGATAAT
GAGCACTCCCGTTTTGAAGAGCTTATTCGCTATGGCAGTACCCAGGAGGCGAAGCAAGAGGCGGCAACGTACAATCCCTT
TGCCGATCTTAAATCCCTGATGTCGAATAAGAAGTAA

Upstream 100 bases:

>100_bases
CGTGAGTGAAGCGGTTAACCCGGATAGCTGATGCGCCACGATTGCACCGGACTGATTGGCGCGTTATGCTGCGCCCAACA
TAGGCTGTAACCTGACTTTT

Downstream 100 bases:

>100_bases
TCACATCTTTCAATGAAAAAAGCGCCTGGTTGGCGCTTTTTTTGTCTGTGCCACTTGCCACCTTGTTTTTGCTTTACAAG
TGAACAAATTCTGATTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTQSKLDKVLAAEREYREKREGGYREKALKLYPWVCGRCAREFTHKNLSELTVHHRDHNHDNNPPDGSNWELLCLYCHDN
EHSRFEELIRYGSTQEAKQEAATYNPFADLKSLMSNKK

Sequences:

>Translated_118_residues
MTQSKLDKVLAAEREYREKREGGYREKALKLYPWVCGRCAREFTHKNLSELTVHHRDHNHDNNPPDGSNWELLCLYCHDN
EHSRFEELIRYGSTQEAKQEAATYNPFADLKSLMSNKK
>Mature_117_residues
TQSKLDKVLAAEREYREKREGGYREKALKLYPWVCGRCAREFTHKNLSELTVHHRDHNHDNNPPDGSNWELLCLYCHDNE
HSRFEELIRYGSTQEAKQEAATYNPFADLKSLMSNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786611, Length=104, Percent_Identity=66.3461538461538, Blast_Score=150, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002711
- InterPro:   IPR003615
- InterPro:   IPR015880 [H]

Pfam domain/function: PF01844 HNH [H]

EC number: NA

Molecular weight: Translated: 13926; Mature: 13794

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSKLDKVLAAEREYREKREGGYREKALKLYPWVCGRCAREFTHKNLSELTVHHRDHNH
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
DNNPPDGSNWELLCLYCHDNEHSRFEELIRYGSTQEAKQEAATYNPFADLKSLMSNKK
CCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
TQSKLDKVLAAEREYREKREGGYREKALKLYPWVCGRCAREFTHKNLSELTVHHRDHNH
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
DNNPPDGSNWELLCLYCHDNEHSRFEELIRYGSTQEAKQEAATYNPFADLKSLMSNKK
CCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]