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The map label for this gene is yqcA [H]

Identifier: 119774269

GI number: 119774269

Start: 1381214

End: 1381678

Strand: Direct

Name: yqcA [H]

Synonym: Sama_1132

Alternate gene names: 119774269

Gene position: 1381214-1381678 (Clockwise)

Preceding gene: 119774268

Following gene: 119774270

Centisome position: 32.08

GC content: 52.47

Gene sequence:

>465_bases
ATGAAACACGTTGACCTGGCATTTGGCACTGTTTATGGCAGCGCGCAGTTTGTGGCTGAAACCCTGGCAGATGAACTCGC
AGACTTGGGATATAGCGTTCGGCTATGGCAATCCCATGAGCTGAACGACTTCACTCCCAGTAATGAAGGACTATTGATTC
TGGTGTCGTCCACCACTGGCAGTGGTGATTTACCGGAAGACATCCAGTCCTGGTACTACCGCATCCAATCAACTGCACCC
TATTTACCCGGTCTTCATTACAGCGTCATTGGCCTTGGGGATTCCAGCTACAGCGAGTTTTGTGGTGCCGGCGAAAAGCT
GGATGCACTCTTTACTGAGCTGGGGGCCAAACGGGTCTTGCCGCTGCTGCGCATTGATGCAATGGAAACCATGGAACCGG
AATTAGAGGCCAAAACGTGGCTGACGCAATGGCACCAGCAAGTTCAGCACGGCCTGAACGACTAA

Upstream 100 bases:

>100_bases
CGCCAATGAATATGACGACTTGCCTGTGGTTGGTCCTTTCGCGTATGTTTGAGTCCATATTACTGATTATTTTAAATTAA
ACCGGGAGAGTTACCCCGAA

Downstream 100 bases:

>100_bases
CCCGCCTGAACCGACACTGGTTCAGGTTTGCCCAGCGGCTGTCGCAAACGCTGCTGATCCCCATTGCCATACTCCCGGCA
GCGGGCGTCATGATAGGGAT

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKHVDLAFGTVYGSAQFVAETLADELADLGYSVRLWQSHELNDFTPSNEGLLILVSSTTGSGDLPEDIQSWYYRIQSTAP
YLPGLHYSVIGLGDSSYSEFCGAGEKLDALFTELGAKRVLPLLRIDAMETMEPELEAKTWLTQWHQQVQHGLND

Sequences:

>Translated_154_residues
MKHVDLAFGTVYGSAQFVAETLADELADLGYSVRLWQSHELNDFTPSNEGLLILVSSTTGSGDLPEDIQSWYYRIQSTAP
YLPGLHYSVIGLGDSSYSEFCGAGEKLDALFTELGAKRVLPLLRIDAMETMEPELEAKTWLTQWHQQVQHGLND
>Mature_154_residues
MKHVDLAFGTVYGSAQFVAETLADELADLGYSVRLWQSHELNDFTPSNEGLLILVSSTTGSGDLPEDIQSWYYRIQSTAP
YLPGLHYSVIGLGDSSYSEFCGAGEKLDALFTELGAKRVLPLLRIDAMETMEPELEAKTWLTQWHQQVQHGLND

Specific function: Probable electron transporter [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Homo sapiens, GI169790956, Length=121, Percent_Identity=33.8842975206612, Blast_Score=68, Evalue=3e-12,
Organism=Homo sapiens, GI169790958, Length=121, Percent_Identity=33.8842975206612, Blast_Score=68, Evalue=3e-12,
Organism=Escherichia coli, GI1789154, Length=144, Percent_Identity=40.2777777777778, Blast_Score=115, Evalue=1e-27,
Organism=Escherichia coli, GI1790181, Length=144, Percent_Identity=34.0277777777778, Blast_Score=93, Evalue=8e-21,
Organism=Escherichia coli, GI1789123, Length=154, Percent_Identity=31.1688311688312, Blast_Score=74, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17531441, Length=146, Percent_Identity=32.8767123287671, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32563863, Length=122, Percent_Identity=34.4262295081967, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17566446, Length=120, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001094
- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 17126; Mature: 17126

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHVDLAFGTVYGSAQFVAETLADELADLGYSVRLWQSHELNDFTPSNEGLLILVSSTTG
CCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCC
SGDLPEDIQSWYYRIQSTAPYLPGLHYSVIGLGDSSYSEFCGAGEKLDALFTELGAKRVL
CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHH
PLLRIDAMETMEPELEAKTWLTQWHQQVQHGLND
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKHVDLAFGTVYGSAQFVAETLADELADLGYSVRLWQSHELNDFTPSNEGLLILVSSTTG
CCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCC
SGDLPEDIQSWYYRIQSTAPYLPGLHYSVIGLGDSSYSEFCGAGEKLDALFTELGAKRVL
CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHH
PLLRIDAMETMEPELEAKTWLTQWHQQVQHGLND
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]