| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is ptsG [H]
Identifier: 119774270
GI number: 119774270
Start: 1381642
End: 1383099
Strand: Direct
Name: ptsG [H]
Synonym: Sama_1133
Alternate gene names: 119774270
Gene position: 1381642-1383099 (Clockwise)
Preceding gene: 119774269
Following gene: 119774271
Centisome position: 32.09
GC content: 53.98
Gene sequence:
>1458_bases ATGGCACCAGCAAGTTCAGCACGGCCTGAACGACTAACCCGCCTGAACCGACACTGGTTCAGGTTTGCCCAGCGGCTGTC GCAAACGCTGCTGATCCCCATTGCCATACTCCCGGCAGCGGGCGTCATGATAGGGATTGCTACTAATCCCTTGCCCTTTA TTCCAGATGTGGCCAATGTGTTGATGTTGAGTGTGGGCAAGCTCATCTTCGACATTATGCCCATGCTGTTTGCCATCGCG GTCGCTATTGGTTTCTGCCGCGATCAGGGAATTGCCGCCTTCTCTGCTGCCTTTGGCTACGGTGTGCTGCTGTCTACTCT GGCAGCAGCGGCCAAGGTTTATCATTTGCCGTCTCACATAGTGTGGGGTACGCCCACCATAGATACCGGCATAGCCGGCG GCATGTTAGTGGGGGGGATTACCTGCGTTGCGGTGCGGCTCAGTGAAAAGCTCAGGCTGCCTGCCGTGTTTTCGTTTTTT GAAGGCAGACGCAGCGCCCCGCTGATAATGATCCCCCTGGTGATGTTGCTCGCTGTAATGCTGGCGTTTATCTGGCCGCC ACTTGCCTTATCCATTGAGCGTTTATCTGACTGGGCCGTGTATCAGGAACCTGCGATTGCCTTCGGATTTTACGGTATGG TCGAACGGTTGTTGTTGCCGCTTGGGCTGCACCACATCTGGAATGCGCCTTTTTATCTGGAAGTGGGTCAATATGCCCAC GATGGCGAAATTGTACGGGGGGAGATGGCGAGATATTTTGCTGGCGATCCTTCTGCGGGGAACCTTGCCGGTGGTTACCT GATTAAAATGTGGGGGCTGCCTGCGGCGGCACTGGCCATATGGCGCTGCGCGGATAGAAATCAACGTAACCGGGTTGCCG GGGTCATGTTATCTGCCGCGACTGCCAGTTGGCTGACCGGTGTGACAGAGCCGATTGAGTTCGCTTTTTTGTTTGTGGCA CCACTCTTGTACTTGTGTCATGCCCTGCTGACGGGTCTCGCTTACAGCATCGCCATTTTGCTTGATATGCACCACAGTGT GGTGTTTTCCCACGGATTGGTGGATTTCGTGCTCCTGTTTCCGCAATCGAGTAATACCCATTGGATTTGGTTCCTGGGGC CGCTGACATTTGTGATTTATTACATTCTTTTCCGGGCCAGTATTCTGGCGTTTAACCTGAAAACCCCCGGCCGCTTTGAA GCCGATACAGGACAGAAACGTAATTTGATTGCCATCGTCTCTGCGCTGGGCGGCGGCGGAAACATTGCTGATTTATCAGC TTGCCTGACCCGTCTGCGGATAAGTGTCGCCGATCCTTCCCAGGTAGACAGACAAAGGTTAATGTCATTGGGTGCCAAAG GCGTGATAGTGGTGGGCAGTGGTGTTCAGCTGGTGTTTGGTACCAAGGCCGAGACCTTAAGAAAGCTGCTGCAGCGTTAC CTGGATACACGTAGTTAA
Upstream 100 bases:
>100_bases TCTTTACTGAGCTGGGGGCCAAACGGGTCTTGCCGCTGCTGCGCATTGATGCAATGGAAACCATGGAACCGGAATTAGAG GCCAAAACGTGGCTGACGCA
Downstream 100 bases:
>100_bases GCCGTCTGTTGTGGGATCTTGAAATTTACGGCCAATTTTTTACGTTTCTTCTTGTCTATCTCCCCATGTTTCTCTGATAT CTGATAAAAATCAGGGTAAT
Product: PTS system, glucose-specific IIBC component
Products: NA
Alternate protein names: EIICB-Glc; EII-Glc; Glucose permease IIC component; PTS system glucose-specific EIIC component; Glucose-specific phosphotransferase enzyme IIB component; PTS system glucose-specific EIIB component [H]
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MAPASSARPERLTRLNRHWFRFAQRLSQTLLIPIAILPAAGVMIGIATNPLPFIPDVANVLMLSVGKLIFDIMPMLFAIA VAIGFCRDQGIAAFSAAFGYGVLLSTLAAAAKVYHLPSHIVWGTPTIDTGIAGGMLVGGITCVAVRLSEKLRLPAVFSFF EGRRSAPLIMIPLVMLLAVMLAFIWPPLALSIERLSDWAVYQEPAIAFGFYGMVERLLLPLGLHHIWNAPFYLEVGQYAH DGEIVRGEMARYFAGDPSAGNLAGGYLIKMWGLPAAALAIWRCADRNQRNRVAGVMLSAATASWLTGVTEPIEFAFLFVA PLLYLCHALLTGLAYSIAILLDMHHSVVFSHGLVDFVLLFPQSSNTHWIWFLGPLTFVIYYILFRASILAFNLKTPGRFE ADTGQKRNLIAIVSALGGGGNIADLSACLTRLRISVADPSQVDRQRLMSLGAKGVIVVGSGVQLVFGTKAETLRKLLQRY LDTRS
Sequences:
>Translated_485_residues MAPASSARPERLTRLNRHWFRFAQRLSQTLLIPIAILPAAGVMIGIATNPLPFIPDVANVLMLSVGKLIFDIMPMLFAIA VAIGFCRDQGIAAFSAAFGYGVLLSTLAAAAKVYHLPSHIVWGTPTIDTGIAGGMLVGGITCVAVRLSEKLRLPAVFSFF EGRRSAPLIMIPLVMLLAVMLAFIWPPLALSIERLSDWAVYQEPAIAFGFYGMVERLLLPLGLHHIWNAPFYLEVGQYAH DGEIVRGEMARYFAGDPSAGNLAGGYLIKMWGLPAAALAIWRCADRNQRNRVAGVMLSAATASWLTGVTEPIEFAFLFVA PLLYLCHALLTGLAYSIAILLDMHHSVVFSHGLVDFVLLFPQSSNTHWIWFLGPLTFVIYYILFRASILAFNLKTPGRFE ADTGQKRNLIAIVSALGGGGNIADLSACLTRLRISVADPSQVDRQRLMSLGAKGVIVVGSGVQLVFGTKAETLRKLLQRY LDTRS >Mature_484_residues APASSARPERLTRLNRHWFRFAQRLSQTLLIPIAILPAAGVMIGIATNPLPFIPDVANVLMLSVGKLIFDIMPMLFAIAV AIGFCRDQGIAAFSAAFGYGVLLSTLAAAAKVYHLPSHIVWGTPTIDTGIAGGMLVGGITCVAVRLSEKLRLPAVFSFFE GRRSAPLIMIPLVMLLAVMLAFIWPPLALSIERLSDWAVYQEPAIAFGFYGMVERLLLPLGLHHIWNAPFYLEVGQYAHD GEIVRGEMARYFAGDPSAGNLAGGYLIKMWGLPAAALAIWRCADRNQRNRVAGVMLSAATASWLTGVTEPIEFAFLFVAP LLYLCHALLTGLAYSIAILLDMHHSVVFSHGLVDFVLLFPQSSNTHWIWFLGPLTFVIYYILFRASILAFNLKTPGRFEA DTGQKRNLIAIVSALGGGGNIADLSACLTRLRISVADPSQVDRQRLMSLGAKGVIVVGSGVQLVFGTKAETLRKLLQRYL DTRS
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787343, Length=472, Percent_Identity=44.4915254237288, Blast_Score=433, Evalue=1e-122, Organism=Escherichia coli, GI1786894, Length=478, Percent_Identity=34.3096234309623, Blast_Score=248, Evalue=9e-67, Organism=Escherichia coli, GI1787908, Length=523, Percent_Identity=32.887189292543, Blast_Score=226, Evalue=2e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011299 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 52823; Mature: 52692
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPASSARPERLTRLNRHWFRFAQRLSQTLLIPIAILPAAGVMIGIATNPLPFIPDVANV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHH LMLSVGKLIFDIMPMLFAIAVAIGFCRDQGIAAFSAAFGYGVLLSTLAAAAKVYHLPSHI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VWGTPTIDTGIAGGMLVGGITCVAVRLSEKLRLPAVFSFFEGRRSAPLIMIPLVMLLAVM EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH LAFIWPPLALSIERLSDWAVYQEPAIAFGFYGMVERLLLPLGLHHIWNAPFYLEVGQYAH HHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC DGEIVRGEMARYFAGDPSAGNLAGGYLIKMWGLPAAALAIWRCADRNQRNRVAGVMLSAA CCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHH TASWLTGVTEPIEFAFLFVAPLLYLCHALLTGLAYSIAILLDMHHSVVFSHGLVDFVLLF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE PQSSNTHWIWFLGPLTFVIYYILFRASILAFNLKTPGRFEADTGQKRNLIAIVSALGGGG CCCCCCEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHEEECCCCCC NIADLSACLTRLRISVADPSQVDRQRLMSLGAKGVIVVGSGVQLVFGTKAETLRKLLQRY CHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCEEEEECCEEEEECCCHHHHHHHHHHH LDTRS HCCCC >Mature Secondary Structure APASSARPERLTRLNRHWFRFAQRLSQTLLIPIAILPAAGVMIGIATNPLPFIPDVANV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHH LMLSVGKLIFDIMPMLFAIAVAIGFCRDQGIAAFSAAFGYGVLLSTLAAAAKVYHLPSHI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VWGTPTIDTGIAGGMLVGGITCVAVRLSEKLRLPAVFSFFEGRRSAPLIMIPLVMLLAVM EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH LAFIWPPLALSIERLSDWAVYQEPAIAFGFYGMVERLLLPLGLHHIWNAPFYLEVGQYAH HHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC DGEIVRGEMARYFAGDPSAGNLAGGYLIKMWGLPAAALAIWRCADRNQRNRVAGVMLSAA CCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHH TASWLTGVTEPIEFAFLFVAPLLYLCHALLTGLAYSIAILLDMHHSVVFSHGLVDFVLLF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE PQSSNTHWIWFLGPLTFVIYYILFRASILAFNLKTPGRFEADTGQKRNLIAIVSALGGGG CCCCCCEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHEEECCCCCC NIADLSACLTRLRISVADPSQVDRQRLMSLGAKGVIVVGSGVQLVFGTKAETLRKLLQRY CHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCEEEEECCEEEEECCCHHHHHHHHHHH LDTRS HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]