| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119774219
Identifier: 119774219
GI number: 119774219
Start: 1309695
End: 1310219
Strand: Direct
Name: 119774219
Synonym: Sama_1082
Alternate gene names: NA
Gene position: 1309695-1310219 (Clockwise)
Preceding gene: 119774218
Following gene: 119774221
Centisome position: 30.41
GC content: 59.05
Gene sequence:
>525_bases ATGACGCCAATCCTCACCATCAGCCAAGCCAGTTGCGATGAAGACGTTGTCGCCGCAGCAGATCTCATTGATAGCCGGGA TGATAACCATCATCCCCTCGACAGAGCAGCACTGGCCAAGGCCAGATTGCTTCTGCTGGCACGGCTCGATGGCAGGCTGG TGGGCTGTGGTGCCATTAAGGCCGGTGACGGCGAGGTGGCAGAATTAGGCTATCTGGTAGTGGCATCCCAGTATCGACGC CTCGGCATTGGCGCCAGACTCACCCAGGCACGGATTGACTGGGCCAGAGCACAGGGGATAAAACTGCTGTGGGCGACGGT AAGAGCGGAAAACCAGGCCAGTCGTGAGAATCTACTGAAGGCCGGCTGGCAGTTTTATGGGGACTACCTCAGTATTCGCG GCACCGGAAATACCATTGGTTGGTATGTGTTGCCGCTGCAGCAAGGGCTCGACATTCAAGCCTTAATGGCGGGCCCCATA GGCAGCAGAACCCCCGTCAGTCAGGGGCGCGGGGCGCACGGCTGA
Upstream 100 bases:
>100_bases TGGATCAGGACCCAGCGCTATCCGGCTCGGTGATTTTGACTACGGTGACAGATGTGATTGGGTTTCTCAGTTTTCTTGGC CTTGCGACCATACTCTTTTT
Downstream 100 bases:
>100_bases CACGTTGGCGCCAAAGCCCTTTGAGTTCCGGGTACACCGGCAACACCGCCGAACACATCACCAAGGCGATACCTATCAGG CTTAACCAATTCGGCACTTC
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTPILTISQASCDEDVVAAADLIDSRDDNHHPLDRAALAKARLLLLARLDGRLVGCGAIKAGDGEVAELGYLVVASQYRR LGIGARLTQARIDWARAQGIKLLWATVRAENQASRENLLKAGWQFYGDYLSIRGTGNTIGWYVLPLQQGLDIQALMAGPI GSRTPVSQGRGAHG
Sequences:
>Translated_174_residues MTPILTISQASCDEDVVAAADLIDSRDDNHHPLDRAALAKARLLLLARLDGRLVGCGAIKAGDGEVAELGYLVVASQYRR LGIGARLTQARIDWARAQGIKLLWATVRAENQASRENLLKAGWQFYGDYLSIRGTGNTIGWYVLPLQQGLDIQALMAGPI GSRTPVSQGRGAHG >Mature_173_residues TPILTISQASCDEDVVAAADLIDSRDDNHHPLDRAALAKARLLLLARLDGRLVGCGAIKAGDGEVAELGYLVVASQYRRL GIGARLTQARIDWARAQGIKLLWATVRAENQASRENLLKAGWQFYGDYLSIRGTGNTIGWYVLPLQQGLDIQALMAGPIG SRTPVSQGRGAHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18703; Mature: 18571
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPILTISQASCDEDVVAAADLIDSRDDNHHPLDRAALAKARLLLLARLDGRLVGCGAIK CCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECEEE AGDGEVAELGYLVVASQYRRLGIGARLTQARIDWARAQGIKLLWATVRAENQASRENLLK CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHH AGWQFYGDYLSIRGTGNTIGWYVLPLQQGLDIQALMAGPIGSRTPVSQGRGAHG HHHHHHCCEEEEEECCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure TPILTISQASCDEDVVAAADLIDSRDDNHHPLDRAALAKARLLLLARLDGRLVGCGAIK CCEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECEEE AGDGEVAELGYLVVASQYRRLGIGARLTQARIDWARAQGIKLLWATVRAENQASRENLLK CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHH AGWQFYGDYLSIRGTGNTIGWYVLPLQQGLDIQALMAGPIGSRTPVSQGRGAHG HHHHHHCCEEEEEECCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA