Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774219

Identifier: 119774219

GI number: 119774219

Start: 1309695

End: 1310219

Strand: Direct

Name: 119774219

Synonym: Sama_1082

Alternate gene names: NA

Gene position: 1309695-1310219 (Clockwise)

Preceding gene: 119774218

Following gene: 119774221

Centisome position: 30.41

GC content: 59.05

Gene sequence:

>525_bases
ATGACGCCAATCCTCACCATCAGCCAAGCCAGTTGCGATGAAGACGTTGTCGCCGCAGCAGATCTCATTGATAGCCGGGA
TGATAACCATCATCCCCTCGACAGAGCAGCACTGGCCAAGGCCAGATTGCTTCTGCTGGCACGGCTCGATGGCAGGCTGG
TGGGCTGTGGTGCCATTAAGGCCGGTGACGGCGAGGTGGCAGAATTAGGCTATCTGGTAGTGGCATCCCAGTATCGACGC
CTCGGCATTGGCGCCAGACTCACCCAGGCACGGATTGACTGGGCCAGAGCACAGGGGATAAAACTGCTGTGGGCGACGGT
AAGAGCGGAAAACCAGGCCAGTCGTGAGAATCTACTGAAGGCCGGCTGGCAGTTTTATGGGGACTACCTCAGTATTCGCG
GCACCGGAAATACCATTGGTTGGTATGTGTTGCCGCTGCAGCAAGGGCTCGACATTCAAGCCTTAATGGCGGGCCCCATA
GGCAGCAGAACCCCCGTCAGTCAGGGGCGCGGGGCGCACGGCTGA

Upstream 100 bases:

>100_bases
TGGATCAGGACCCAGCGCTATCCGGCTCGGTGATTTTGACTACGGTGACAGATGTGATTGGGTTTCTCAGTTTTCTTGGC
CTTGCGACCATACTCTTTTT

Downstream 100 bases:

>100_bases
CACGTTGGCGCCAAAGCCCTTTGAGTTCCGGGTACACCGGCAACACCGCCGAACACATCACCAAGGCGATACCTATCAGG
CTTAACCAATTCGGCACTTC

Product: acetyltransferase

Products: NA

Alternate protein names: Acetyltransferase

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTPILTISQASCDEDVVAAADLIDSRDDNHHPLDRAALAKARLLLLARLDGRLVGCGAIKAGDGEVAELGYLVVASQYRR
LGIGARLTQARIDWARAQGIKLLWATVRAENQASRENLLKAGWQFYGDYLSIRGTGNTIGWYVLPLQQGLDIQALMAGPI
GSRTPVSQGRGAHG

Sequences:

>Translated_174_residues
MTPILTISQASCDEDVVAAADLIDSRDDNHHPLDRAALAKARLLLLARLDGRLVGCGAIKAGDGEVAELGYLVVASQYRR
LGIGARLTQARIDWARAQGIKLLWATVRAENQASRENLLKAGWQFYGDYLSIRGTGNTIGWYVLPLQQGLDIQALMAGPI
GSRTPVSQGRGAHG
>Mature_173_residues
TPILTISQASCDEDVVAAADLIDSRDDNHHPLDRAALAKARLLLLARLDGRLVGCGAIKAGDGEVAELGYLVVASQYRRL
GIGARLTQARIDWARAQGIKLLWATVRAENQASRENLLKAGWQFYGDYLSIRGTGNTIGWYVLPLQQGLDIQALMAGPIG
SRTPVSQGRGAHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18703; Mature: 18571

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPILTISQASCDEDVVAAADLIDSRDDNHHPLDRAALAKARLLLLARLDGRLVGCGAIK
CCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECEEE
AGDGEVAELGYLVVASQYRRLGIGARLTQARIDWARAQGIKLLWATVRAENQASRENLLK
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHH
AGWQFYGDYLSIRGTGNTIGWYVLPLQQGLDIQALMAGPIGSRTPVSQGRGAHG
HHHHHHCCEEEEEECCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPILTISQASCDEDVVAAADLIDSRDDNHHPLDRAALAKARLLLLARLDGRLVGCGAIK
CCEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECEEE
AGDGEVAELGYLVVASQYRRLGIGARLTQARIDWARAQGIKLLWATVRAENQASRENLLK
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHH
AGWQFYGDYLSIRGTGNTIGWYVLPLQQGLDIQALMAGPIGSRTPVSQGRGAHG
HHHHHHCCEEEEEECCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA