| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is mgtE [H]
Identifier: 119774218
GI number: 119774218
Start: 1308334
End: 1309698
Strand: Direct
Name: mgtE [H]
Synonym: Sama_1081
Alternate gene names: 119774218
Gene position: 1308334-1309698 (Clockwise)
Preceding gene: 119774216
Following gene: 119774219
Centisome position: 30.38
GC content: 55.38
Gene sequence:
>1365_bases TTGCCAGAACAGGAACCCAACCTGGCCCCACAGAATGAAGTGGGCCTGGTCGTACAACAGTTAACCGGCGCTGAGGGCCA GGCACAGGCCGAGGTATTCTCAGAAATTCTCGAAGACGCCGAACCCGGCACTGTAGCCTTGTTGCTGGAAGCCTTGCCGC TGGATGAGCGTTATGAGCGATGGCAGCAGGTGGAGTTCGCCGACAGGGTAGAAGTGCTCAGCCTGATGCGCGCCGATCCG CGCATGGGCATCTTGCGGCGTATGCCTGACGACGAAGTCGATCTCTTGTTTGCCCAGTTAAGTCCAGAAGATCTGATTGA GTGGAGTGACTATCTTCCCGAGAGCTTTACCGACAGGGCTCTGGCGCAAATGGGCGAGCGCCAGCGTCAGCACTTCGAAC TCTATAATCAATATTCCGAAAACGAGATAGGCCGTTATGCCGACCACCAGATGTTGGTGCTTTCTACCAAGGCAACCATA GGTCAGGCGCAGCGCTTTTTTCGCAGAATTGAACTCGACTGTAATGACTCGCTGTTTTTGGTGGACGAAGAAGACCACTT TCGGGGAGCCGTCAGCCGTTATGAAGTATTTCGCAGTAATCCCGATGAGCCACTGCTGAGTCTGATGGACGAAGACAGTC GTGCCATCAGCGCCGATGCCACCCTGATGGAGGCGGCTGAACTGCTCGAACATAGCCGAGACGTTGAGCTGCCAGTGGTG GACGATGAAGGTGGGCTGATTGGCCGGGTGACGTTGAGAACCGCGACCGAGTTGGTTCGTGAACATTACGAAGCCCAATT GATGGCAAGCGCCGGTATGAATGAAACCGACGACTTGTTCGCCCCCATTATGAAAGGCGCACGGCGCCGCGCCGTTTGGC TGGGTATTAACCTGCTCACGGCCTTCCTTGCGTCGGCCACAATCGGTTTGTTTGAAGACGTGCTGTCGCAGGTGGTTGCC CTTGCAGTCTTAATGCCTATCGTAGCCTCCATGGGGGGTATTGCCGGCAGTCAGTCGCTGACGCTGATGATCCGCGGCAT GGCGATGGGGCAGATTTCAGCCGGTAACCTCTGGTCTTTGATGAAAAACGAACTGGGCATAGGTGCCGTGAATGGTGTGC TCTGGGCCATCGTTATAGGCGCTGTGTCGGGTTGGTGGTTCAGCAATGAAATCATCGGCATCGCCATTGGCTGCGCCATT CTGATCAATATGCTGGTGGCGGCCGGCGCCGGTGTGCTGGTACCCATGGTGCTGCAAAAAATGGATCAGGACCCAGCGCT ATCCGGCTCGGTGATTTTGACTACGGTGACAGATGTGATTGGGTTTCTCAGTTTTCTTGGCCTTGCGACCATACTCTTTT TATGA
Upstream 100 bases:
>100_bases TTAAATTGTGTGCAATATAATTGCTCGGTTGATATGACACAAAAATCTCAATATAGTCAGCCACAAGATGTAACCAACGG ACGCCGCCGTGACAGAAAAT
Downstream 100 bases:
>100_bases CGCCAATCCTCACCATCAGCCAAGCCAGTTGCGATGAAGACGTTGTCGCCGCAGCAGATCTCATTGATAGCCGGGATGAT AACCATCATCCCCTCGACAG
Product: magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MPEQEPNLAPQNEVGLVVQQLTGAEGQAQAEVFSEILEDAEPGTVALLLEALPLDERYERWQQVEFADRVEVLSLMRADP RMGILRRMPDDEVDLLFAQLSPEDLIEWSDYLPESFTDRALAQMGERQRQHFELYNQYSENEIGRYADHQMLVLSTKATI GQAQRFFRRIELDCNDSLFLVDEEDHFRGAVSRYEVFRSNPDEPLLSLMDEDSRAISADATLMEAAELLEHSRDVELPVV DDEGGLIGRVTLRTATELVREHYEAQLMASAGMNETDDLFAPIMKGARRRAVWLGINLLTAFLASATIGLFEDVLSQVVA LAVLMPIVASMGGIAGSQSLTLMIRGMAMGQISAGNLWSLMKNELGIGAVNGVLWAIVIGAVSGWWFSNEIIGIAIGCAI LINMLVAAGAGVLVPMVLQKMDQDPALSGSVILTTVTDVIGFLSFLGLATILFL
Sequences:
>Translated_454_residues MPEQEPNLAPQNEVGLVVQQLTGAEGQAQAEVFSEILEDAEPGTVALLLEALPLDERYERWQQVEFADRVEVLSLMRADP RMGILRRMPDDEVDLLFAQLSPEDLIEWSDYLPESFTDRALAQMGERQRQHFELYNQYSENEIGRYADHQMLVLSTKATI GQAQRFFRRIELDCNDSLFLVDEEDHFRGAVSRYEVFRSNPDEPLLSLMDEDSRAISADATLMEAAELLEHSRDVELPVV DDEGGLIGRVTLRTATELVREHYEAQLMASAGMNETDDLFAPIMKGARRRAVWLGINLLTAFLASATIGLFEDVLSQVVA LAVLMPIVASMGGIAGSQSLTLMIRGMAMGQISAGNLWSLMKNELGIGAVNGVLWAIVIGAVSGWWFSNEIIGIAIGCAI LINMLVAAGAGVLVPMVLQKMDQDPALSGSVILTTVTDVIGFLSFLGLATILFL >Mature_453_residues PEQEPNLAPQNEVGLVVQQLTGAEGQAQAEVFSEILEDAEPGTVALLLEALPLDERYERWQQVEFADRVEVLSLMRADPR MGILRRMPDDEVDLLFAQLSPEDLIEWSDYLPESFTDRALAQMGERQRQHFELYNQYSENEIGRYADHQMLVLSTKATIG QAQRFFRRIELDCNDSLFLVDEEDHFRGAVSRYEVFRSNPDEPLLSLMDEDSRAISADATLMEAAELLEHSRDVELPVVD DEGGLIGRVTLRTATELVREHYEAQLMASAGMNETDDLFAPIMKGARRRAVWLGINLLTAFLASATIGLFEDVLSQVVAL AVLMPIVASMGGIAGSQSLTLMIRGMAMGQISAGNLWSLMKNELGIGAVNGVLWAIVIGAVSGWWFSNEIIGIAIGCAIL INMLVAAGAGVLVPMVLQKMDQDPALSGSVILTTVTDVIGFLSFLGLATILFL
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 49948; Mature: 49817
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEQEPNLAPQNEVGLVVQQLTGAEGQAQAEVFSEILEDAEPGTVALLLEALPLDERYER CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHH WQQVEFADRVEVLSLMRADPRMGILRRMPDDEVDLLFAQLSPEDLIEWSDYLPESFTDRA HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHH LAQMGERQRQHFELYNQYSENEIGRYADHQMLVLSTKATIGQAQRFFRRIELDCNDSLFL HHHHHHHHHHHHHHHHHHCCCHHCHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCEEE VDEEDHFRGAVSRYEVFRSNPDEPLLSLMDEDSRAISADATLMEAAELLEHSRDVELPVV EECCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEE DDEGGLIGRVTLRTATELVREHYEAQLMASAGMNETDDLFAPIMKGARRRAVWLGINLLT ECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH AFLASATIGLFEDVLSQVVALAVLMPIVASMGGIAGSQSLTLMIRGMAMGQISAGNLWSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEHHHHCCCCCCHHHHH MKNELGIGAVNGVLWAIVIGAVSGWWFSNEIIGIAIGCAILINMLVAAGAGVLVPMVLQK HHHCCCCHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH MDQDPALSGSVILTTVTDVIGFLSFLGLATILFL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PEQEPNLAPQNEVGLVVQQLTGAEGQAQAEVFSEILEDAEPGTVALLLEALPLDERYER CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHH WQQVEFADRVEVLSLMRADPRMGILRRMPDDEVDLLFAQLSPEDLIEWSDYLPESFTDRA HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHH LAQMGERQRQHFELYNQYSENEIGRYADHQMLVLSTKATIGQAQRFFRRIELDCNDSLFL HHHHHHHHHHHHHHHHHHCCCHHCHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCEEE VDEEDHFRGAVSRYEVFRSNPDEPLLSLMDEDSRAISADATLMEAAELLEHSRDVELPVV EECCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEE DDEGGLIGRVTLRTATELVREHYEAQLMASAGMNETDDLFAPIMKGARRRAVWLGINLLT ECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH AFLASATIGLFEDVLSQVVALAVLMPIVASMGGIAGSQSLTLMIRGMAMGQISAGNLWSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEHHHHCCCCCCHHHHH MKNELGIGAVNGVLWAIVIGAVSGWWFSNEIIGIAIGCAILINMLVAAGAGVLVPMVLQK HHHCCCCHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH MDQDPALSGSVILTTVTDVIGFLSFLGLATILFL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]