The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774206

Identifier: 119774206

GI number: 119774206

Start: 1295107

End: 1295865

Strand: Direct

Name: 119774206

Synonym: Sama_1069

Alternate gene names: NA

Gene position: 1295107-1295865 (Clockwise)

Preceding gene: 119774205

Following gene: 119774207

Centisome position: 30.08

GC content: 56.65

Gene sequence:

>759_bases
ATGAAAGATAGCCAACTGGTGGACACTGAACTTAAGCAGACGCTGGATGCGCTTTACCGTGAAGGTGCCAGGGAAGAGCC
TCCTGAAGCGCTGGATGCGGAAATACTGGCACTGGCCGGTGCCCACCTTGCCAGCCCCAAGCCTGAAATTGTGGTGCGCC
GTGGGTTAAGGCGTTTTCCTTACGCCATCTCCAGCGCGGCGTCTCTGATGTTATTGGTGGGCCTGGTGCTGCTCAACCCG
CAGCAGGTGTTTTTCAATGCCGATACTGTGTTGCCTGAGACGGATATGCTGGTGGCGCCGATGGCAGACGAGGGTATGGT
CAGAACTGAGATGAATGCCAACGCCCGCAATGGCGTGAGCTCAGCGCCTGACATGGCGTCCAGCCAGCCTGCCGTAAACC
AACAGCCCCTGCAAATTGAACAGGGTCAGCAGCCCGAGGCTCAGACTCGCACTGCTCCGGCGGCGTTTTCTTCCCCGCCT
ACGGCCACAGATGAGTCGGCCGAACCGCAAGTGGCAACAACTGCCATACTCAAATCATCGGCGAGGAAATTGGTATCGGA
ACCACTGGCATTAAGACCAGATGGCCTGGCCGATACAGACGACATTGACCTGCTGCTCGCATCTTTGGAAGACACGCTCG
CTGGTGGAGACAGCCAGCTAACCCTGTCGTTAATCGAGGCGTTTATTGCCAGGGAGTATGAGTTAACTGCGCCGCAGCAG
CTAATATTTGACCAGCTTCAATCCCGATTGGCTGAGTGA

Upstream 100 bases:

>100_bases
GAAATTGCCTCTGTATCACTGGAAGCGACCAAGAGCCGTATCCGTTATGCCTATCAGAGCCTCAAAACCTGCGTGGCCAA
GCGATTGGGGGAGGATAGCG

Downstream 100 bases:

>100_bases
ATCACAGCCACAACCATGTCGACAATGAAGGGGGCAAGCATGCAGGCAGTGAAAATTGGACTGGTCCTGATACTGTTTTC
CTGGCCCACATTCGCGGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKDSQLVDTELKQTLDALYREGAREEPPEALDAEILALAGAHLASPKPEIVVRRGLRRFPYAISSAASLMLLVGLVLLNP
QQVFFNADTVLPETDMLVAPMADEGMVRTEMNANARNGVSSAPDMASSQPAVNQQPLQIEQGQQPEAQTRTAPAAFSSPP
TATDESAEPQVATTAILKSSARKLVSEPLALRPDGLADTDDIDLLLASLEDTLAGGDSQLTLSLIEAFIAREYELTAPQQ
LIFDQLQSRLAE

Sequences:

>Translated_252_residues
MKDSQLVDTELKQTLDALYREGAREEPPEALDAEILALAGAHLASPKPEIVVRRGLRRFPYAISSAASLMLLVGLVLLNP
QQVFFNADTVLPETDMLVAPMADEGMVRTEMNANARNGVSSAPDMASSQPAVNQQPLQIEQGQQPEAQTRTAPAAFSSPP
TATDESAEPQVATTAILKSSARKLVSEPLALRPDGLADTDDIDLLLASLEDTLAGGDSQLTLSLIEAFIAREYELTAPQQ
LIFDQLQSRLAE
>Mature_252_residues
MKDSQLVDTELKQTLDALYREGAREEPPEALDAEILALAGAHLASPKPEIVVRRGLRRFPYAISSAASLMLLVGLVLLNP
QQVFFNADTVLPETDMLVAPMADEGMVRTEMNANARNGVSSAPDMASSQPAVNQQPLQIEQGQQPEAQTRTAPAAFSSPP
TATDESAEPQVATTAILKSSARKLVSEPLALRPDGLADTDDIDLLLASLEDTLAGGDSQLTLSLIEAFIAREYELTAPQQ
LIFDQLQSRLAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27061; Mature: 27061

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSQLVDTELKQTLDALYREGAREEPPEALDAEILALAGAHLASPKPEIVVRRGLRRFP
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
YAISSAASLMLLVGLVLLNPQQVFFNADTVLPETDMLVAPMADEGMVRTEMNANARNGVS
HHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCC
SAPDMASSQPAVNQQPLQIEQGQQPEAQTRTAPAAFSSPPTATDESAEPQVATTAILKSS
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ARKLVSEPLALRPDGLADTDDIDLLLASLEDTLAGGDSQLTLSLIEAFIAREYELTAPQQ
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHH
LIFDQLQSRLAE
HHHHHHHHHHCC
>Mature Secondary Structure
MKDSQLVDTELKQTLDALYREGAREEPPEALDAEILALAGAHLASPKPEIVVRRGLRRFP
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
YAISSAASLMLLVGLVLLNPQQVFFNADTVLPETDMLVAPMADEGMVRTEMNANARNGVS
HHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCC
SAPDMASSQPAVNQQPLQIEQGQQPEAQTRTAPAAFSSPPTATDESAEPQVATTAILKSS
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ARKLVSEPLALRPDGLADTDDIDLLLASLEDTLAGGDSQLTLSLIEAFIAREYELTAPQQ
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHH
LIFDQLQSRLAE
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA