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The map label for this gene is 119774197

Identifier: 119774197

GI number: 119774197

Start: 1283617

End: 1284228

Strand: Direct

Name: 119774197

Synonym: Sama_1060

Alternate gene names: NA

Gene position: 1283617-1284228 (Clockwise)

Preceding gene: 119774196

Following gene: 119774205

Centisome position: 29.81

GC content: 54.08

Gene sequence:

>612_bases
ATGTACAAGGCCCTGACGCCACTCCTGTTGCTGGCCCTGCTTGGTGGCTGCGCCAGCGCCCCGCCCAAAGATCCCGATAA
TATCTGTGCCATTTTCAAGGAGCATCGCAGCTGGTATGAGGCCGCGCTCGATACCAAGGAAAAATGGGGCGTCCCTGTGC
ATGTGCCGCTGGCGATGATGTATCAGGAAAGTTCATTCAAGCATGACGCGGCGCCGCCCATGGAGTATTTTCTGGGCTTT
ATCCCCATAGGCCGTGCCAGTGATGCCTACGGCTATGCTCAGGCCAAGACCATGACCTGGGATGATTACGTCAGGGAAAC
CGGCAACAGTTGGTCCAGCCGCAGTGATTTTGATGATGCCATGGACTTTATGGGTTGGTTTATCACCAAAACCCACAAGA
TTAATGGTGTATCCAAGTGGGACGCCCGCGCTCAATATCTCAACTATCACGAAGGTTGGGGTGGATATCGTCGTGGCACC
CATAAATCCAAGAAGTGGCTCATCAAGGTTGCCGCCAAGGTGGATGAACGCTCCCGTCGCTATGCCGCTCAGTACAAGGG
CTGTAAGGATGAGTTGGACTCTTCCTGGCTGTACCGTCTCTTCTTTGACTGA

Upstream 100 bases:

>100_bases
TATCAACCCAGAATGACTGCCGTCACCCTTAGCCTTGTACGAATTGCATCTTAATCAATGACATGGGAAACTCGACCCAC
TGGTTGTTGTTGGAGTTGAT

Downstream 100 bases:

>100_bases
CGATTCCTCGGCGGAGAGTGGAGCAGGTCGGCGCTGACGCTGGACGTTAACCTACGTTCGACATTGGCGGATAACAATAA
GGGCATTCACGTGGAATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulatory Protein; Lytic Transglycosylase Catalytic; Soluble Lytic Murein Transglycosylase; Glycoside Hydroylase Family; Lytic Transglycosylase; Lytic Murein Transglycosylase; Glycoside Hydrolase Family Protein; Transcriptional Regulator Protein; Transmembrane Protein; Transglycosylase SLT Domain; Conserved Secreted Protein

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MYKALTPLLLLALLGGCASAPPKDPDNICAIFKEHRSWYEAALDTKEKWGVPVHVPLAMMYQESSFKHDAAPPMEYFLGF
IPIGRASDAYGYAQAKTMTWDDYVRETGNSWSSRSDFDDAMDFMGWFITKTHKINGVSKWDARAQYLNYHEGWGGYRRGT
HKSKKWLIKVAAKVDERSRRYAAQYKGCKDELDSSWLYRLFFD

Sequences:

>Translated_203_residues
MYKALTPLLLLALLGGCASAPPKDPDNICAIFKEHRSWYEAALDTKEKWGVPVHVPLAMMYQESSFKHDAAPPMEYFLGF
IPIGRASDAYGYAQAKTMTWDDYVRETGNSWSSRSDFDDAMDFMGWFITKTHKINGVSKWDARAQYLNYHEGWGGYRRGT
HKSKKWLIKVAAKVDERSRRYAAQYKGCKDELDSSWLYRLFFD
>Mature_203_residues
MYKALTPLLLLALLGGCASAPPKDPDNICAIFKEHRSWYEAALDTKEKWGVPVHVPLAMMYQESSFKHDAAPPMEYFLGF
IPIGRASDAYGYAQAKTMTWDDYVRETGNSWSSRSDFDDAMDFMGWFITKTHKINGVSKWDARAQYLNYHEGWGGYRRGT
HKSKKWLIKVAAKVDERSRRYAAQYKGCKDELDSSWLYRLFFD

Specific function: Unknown

COG id: COG4764

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23437; Mature: 23437

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKALTPLLLLALLGGCASAPPKDPDNICAIFKEHRSWYEAALDTKEKWGVPVHVPLAMM
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEHHHHHH
YQESSFKHDAAPPMEYFLGFIPIGRASDAYGYAQAKTMTWDDYVRETGNSWSSRSDFDDA
HHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCHHHH
MDFMGWFITKTHKINGVSKWDARAQYLNYHEGWGGYRRGTHKSKKWLIKVAAKVDERSRR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YAAQYKGCKDELDSSWLYRLFFD
HHHHHCCCHHHHCHHHHHHEECC
>Mature Secondary Structure
MYKALTPLLLLALLGGCASAPPKDPDNICAIFKEHRSWYEAALDTKEKWGVPVHVPLAMM
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEHHHHHH
YQESSFKHDAAPPMEYFLGFIPIGRASDAYGYAQAKTMTWDDYVRETGNSWSSRSDFDDA
HHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCHHHH
MDFMGWFITKTHKINGVSKWDARAQYLNYHEGWGGYRRGTHKSKKWLIKVAAKVDERSRR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YAAQYKGCKDELDSSWLYRLFFD
HHHHHCCCHHHHCHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA