| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is folB [H]
Identifier: 119773966
GI number: 119773966
Start: 1013521
End: 1013880
Strand: Direct
Name: folB [H]
Synonym: Sama_0829
Alternate gene names: 119773966
Gene position: 1013521-1013880 (Clockwise)
Preceding gene: 119773964
Following gene: 119773967
Centisome position: 23.54
GC content: 54.17
Gene sequence:
>360_bases ATGGATAAAGTACTGATCCGTGCCCTGCGTATCGACACCGTTATCGGTGTGTACGACTGGGAAAAAGCCATTCAGCAATC GCTGTTTCTCGATTTGGACATGGCGTGGGATATTAAACCCGCCGCTGGAACCGATGATTACAGCCATGCCCTGTGCTACG AGACTGTCTCAAATCGTCTGACAGCCCTTATCACTGAAAAACCCATTGAGCTGATTGAAACCGTCGCCGAAATGACTGCC CGCTGCGTGCTGGATGAATTCAGGGTGTCCTGGGTTCGGGTCCGGGTAATGAAACCCGGCGCGGTGAAAACGGCCGAGGC CGTGGGCGTTGAAATTGAGCGCAGTGCCGGGGATTGCTGA
Upstream 100 bases:
>100_bases CTTGGCGCCAATGAGAAAGCGCAATCCATCGATTGTCGCTATCGGCGAGCGGATTATACCGACAAAGCGAGCCAAAGCTT GTCAGACCTCAGGAACTGCC
Downstream 100 bases:
>100_bases GCATGACCCGGATCTATATCAGTGTAGGCAGTAATATTGAGCCGGAAAAATACCTGAGAAACGCCGCAGTTGCCCTGAGA GCGCATCTGGGTGAGCTGCA
Product: dihydroneopterin aldolase
Products: NA
Alternate protein names: DHNA [H]
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MDKVLIRALRIDTVIGVYDWEKAIQQSLFLDLDMAWDIKPAAGTDDYSHALCYETVSNRLTALITEKPIELIETVAEMTA RCVLDEFRVSWVRVRVMKPGAVKTAEAVGVEIERSAGDC
Sequences:
>Translated_119_residues MDKVLIRALRIDTVIGVYDWEKAIQQSLFLDLDMAWDIKPAAGTDDYSHALCYETVSNRLTALITEKPIELIETVAEMTA RCVLDEFRVSWVRVRVMKPGAVKTAEAVGVEIERSAGDC >Mature_119_residues MDKVLIRALRIDTVIGVYDWEKAIQQSLFLDLDMAWDIKPAAGTDDYSHALCYETVSNRLTALITEKPIELIETVAEMTA RCVLDEFRVSWVRVRVMKPGAVKTAEAVGVEIERSAGDC
Specific function: Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. Can use L-threo-dihydroneopterin and D-erythro-dihydroneopterin as substrates for the formation of 6-hydroxymethyldihydropterin, but it can also catalyze the epimeriza
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHNA family [H]
Homologues:
Organism=Escherichia coli, GI87082204, Length=115, Percent_Identity=43.4782608695652, Blast_Score=99, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 [H]
Pfam domain/function: PF02152 FolB [H]
EC number: =4.1.2.25 [H]
Molecular weight: Translated: 13347; Mature: 13347
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKVLIRALRIDTVIGVYDWEKAIQQSLFLDLDMAWDIKPAAGTDDYSHALCYETVSNRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH TALITEKPIELIETVAEMTARCVLDEFRVSWVRVRVMKPGAVKTAEAVGVEIERSAGDC HHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHCEEEECCCCCC >Mature Secondary Structure MDKVLIRALRIDTVIGVYDWEKAIQQSLFLDLDMAWDIKPAAGTDDYSHALCYETVSNRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH TALITEKPIELIETVAEMTARCVLDEFRVSWVRVRVMKPGAVKTAEAVGVEIERSAGDC HHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]