| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is folK [H]
Identifier: 119773967
GI number: 119773967
Start: 1013883
End: 1014386
Strand: Direct
Name: folK [H]
Synonym: Sama_0830
Alternate gene names: 119773967
Gene position: 1013883-1014386 (Clockwise)
Preceding gene: 119773966
Following gene: 119773968
Centisome position: 23.55
GC content: 52.38
Gene sequence:
>504_bases ATGACCCGGATCTATATCAGTGTAGGCAGTAATATTGAGCCGGAAAAATACCTGAGAAACGCCGCAGTTGCCCTGAGAGC GCATCTGGGTGAGCTGCAACTGTCACCCGTGTATCAATCCGAAGCAGTGGGGTTTGAAGGGGAGCACTTCCTCAACATGG TGATAGGCGCCGATACCTCTTTGGGCATCAGTGACCTTGTCGCGTTACTGAAACAGATTGAGCTGGACAATGGCCGCAAA CCCGGCGCCAAAAAATTCAGCGCCAGAACCCTGGATTTGGATTTACTGCTCTTTGGCGATGTTGTTTGCCATGAGCCCAT CGAACTGCCCAGGGCGGAAATTCGCTATAACGCCTTTGTGCTCTGGCCTCTGGCAGACATAGCCCCGGAATGGGTACATC CGTTGGCGGGACAAACTTATGCAGAGCTTTGGCAGCAATTCGATAAACAAAGCCAGCGCCTTTGGCCGGTGGCATTTTCC TGGAACGACGCTTCCCTCATTTAA
Upstream 100 bases:
>100_bases GGGTGTCCTGGGTTCGGGTCCGGGTAATGAAACCCGGCGCGGTGAAAACGGCCGAGGCCGTGGGCGTTGAAATTGAGCGC AGTGCCGGGGATTGCTGAGC
Downstream 100 bases:
>100_bases TAAAGGAATATTATGGATACCTTGCAGGTCATTATCCTTGCCCTTATTCAGGGCCTGACCGAATTTTTGCCCATTTCCAG CTCGGCCCACCTGATTTTAC
Product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTRIYISVGSNIEPEKYLRNAAVALRAHLGELQLSPVYQSEAVGFEGEHFLNMVIGADTSLGISDLVALLKQIELDNGRK PGAKKFSARTLDLDLLLFGDVVCHEPIELPRAEIRYNAFVLWPLADIAPEWVHPLAGQTYAELWQQFDKQSQRLWPVAFS WNDASLI
Sequences:
>Translated_167_residues MTRIYISVGSNIEPEKYLRNAAVALRAHLGELQLSPVYQSEAVGFEGEHFLNMVIGADTSLGISDLVALLKQIELDNGRK PGAKKFSARTLDLDLLLFGDVVCHEPIELPRAEIRYNAFVLWPLADIAPEWVHPLAGQTYAELWQQFDKQSQRLWPVAFS WNDASLI >Mature_166_residues TRIYISVGSNIEPEKYLRNAAVALRAHLGELQLSPVYQSEAVGFEGEHFLNMVIGADTSLGISDLVALLKQIELDNGRKP GAKKFSARTLDLDLLLFGDVVCHEPIELPRAEIRYNAFVLWPLADIAPEWVHPLAGQTYAELWQQFDKQSQRLWPVAFSW NDASLI
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=139, Percent_Identity=35.9712230215827, Blast_Score=83, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 18776; Mature: 18644
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIYISVGSNIEPEKYLRNAAVALRAHLGELQLSPVYQSEAVGFEGEHFLNMVIGADTS CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHEEHEECCCCC LGISDLVALLKQIELDNGRKPGAKKFSARTLDLDLLLFGDVVCHEPIELPRAEIRYNAFV CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCEEECEEE LWPLADIAPEWVHPLAGQTYAELWQQFDKQSQRLWPVAFSWNDASLI EEEHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC >Mature Secondary Structure TRIYISVGSNIEPEKYLRNAAVALRAHLGELQLSPVYQSEAVGFEGEHFLNMVIGADTS EEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHEEHEECCCCC LGISDLVALLKQIELDNGRKPGAKKFSARTLDLDLLLFGDVVCHEPIELPRAEIRYNAFV CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCEEECEEE LWPLADIAPEWVHPLAGQTYAELWQQFDKQSQRLWPVAFSWNDASLI EEEHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1325970; 8202364; 9278503; 1657875; 2537812; 10378268; 10452528 [H]