Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is cobP [H]

Identifier: 119773901

GI number: 119773901

Start: 946956

End: 947501

Strand: Direct

Name: cobP [H]

Synonym: Sama_0764

Alternate gene names: 119773901

Gene position: 946956-947501 (Clockwise)

Preceding gene: 119773900

Following gene: 119773902

Centisome position: 21.99

GC content: 59.16

Gene sequence:

>546_bases
ATGATCCATCTGGTTCTCGGTGGTGCCCGCAGTGGCAAGAGTCGTTTTGCCGAGACCCAGATTGCCCGGGCTTCACTTCA
GGGCATTTATCTTGCCACGGCCACGGCGGGGGATGATGAGATGTCGGCCCGTATCGCCCGTCATCAAAGAGACAGGGCAG
AGGCATCATGCCAGTGGCAACTTATCGAAGCCCCGCTGGACTTGGCTTCGCAGCTCAATGCCCTGTCCGGGGAGACGCGC
CCGGTATTGATAGACTGCCTGACTTTATGGCTGACCAATCACCTGATGGCAGATCCTCAGAAGATGGCCGAGGCCCGCCA
TGAGCTGCTGACAGCCGTTGCGGATTTTCGTGGCCAGCTGTGGCTGGTCAGTAACGAAGTGGGCTCAGGCATAGTGCCCC
TGGGTGAACTCAGTCGCCAGTTTGTGGACGAATCGGGTTGGCTCAATCAGGCCATTGCCGCTATCGCAGACAGGGTGACT
CTGGTGGTGGCCGGGCTGCCACTGGCGCTGAAAGGCATAGCCGTCAACGCTGAAGTGGGAGCATAA

Upstream 100 bases:

>100_bases
CACGCCATATCGGCGGCTATACGGGCGACACGCTTGGTGCCTGTCAGCAGATTCTCGAACTGGTGGTCTATCTGGTGCTC
TTACTGCTCTGGAGCCAGTC

Downstream 100 bases:

>100_bases
CCTATGGGCTTTTCTACGCTGATGATCCAGGGCACGGCCTCGGATGCCGGTAAAACCACGCTGGTCGCCGGGTTGTGTCG
CCTGCTCGCCAGACAAGGCC

Product: cobinamide kinase/cobinamide phosphate guanylyltransferase

Products: NA

Alternate protein names: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase [H]

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MIHLVLGGARSGKSRFAETQIARASLQGIYLATATAGDDEMSARIARHQRDRAEASCQWQLIEAPLDLASQLNALSGETR
PVLIDCLTLWLTNHLMADPQKMAEARHELLTAVADFRGQLWLVSNEVGSGIVPLGELSRQFVDESGWLNQAIAAIADRVT
LVVAGLPLALKGIAVNAEVGA

Sequences:

>Translated_181_residues
MIHLVLGGARSGKSRFAETQIARASLQGIYLATATAGDDEMSARIARHQRDRAEASCQWQLIEAPLDLASQLNALSGETR
PVLIDCLTLWLTNHLMADPQKMAEARHELLTAVADFRGQLWLVSNEVGSGIVPLGELSRQFVDESGWLNQAIAAIADRVT
LVVAGLPLALKGIAVNAEVGA
>Mature_181_residues
MIHLVLGGARSGKSRFAETQIARASLQGIYLATATAGDDEMSARIARHQRDRAEASCQWQLIEAPLDLASQLNALSGETR
PVLIDCLTLWLTNHLMADPQKMAEARHELLTAVADFRGQLWLVSNEVGSGIVPLGELSRQFVDESGWLNQAIAAIADRVT
LVVAGLPLALKGIAVNAEVGA

Specific function: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate [H]

COG id: COG2087

COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788302, Length=185, Percent_Identity=40, Blast_Score=103, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003203 [H]

Pfam domain/function: PF02283 CobU [H]

EC number: =2.7.1.156; =2.7.7.62 [H]

Molecular weight: Translated: 19405; Mature: 19405

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHLVLGGARSGKSRFAETQIARASLQGIYLATATAGDDEMSARIARHQRDRAEASCQWQ
CEEEEEECCCCCHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEE
LIEAPLDLASQLNALSGETRPVLIDCLTLWLTNHLMADPQKMAEARHELLTAVADFRGQL
EEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCE
WLVSNEVGSGIVPLGELSRQFVDESGWLNQAIAAIADRVTLVVAGLPLALKGIAVNAEVG
EEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCC
A
C
>Mature Secondary Structure
MIHLVLGGARSGKSRFAETQIARASLQGIYLATATAGDDEMSARIARHQRDRAEASCQWQ
CEEEEEECCCCCHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEE
LIEAPLDLASQLNALSGETRPVLIDCLTLWLTNHLMADPQKMAEARHELLTAVADFRGQL
EEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCE
WLVSNEVGSGIVPLGELSRQFVDESGWLNQAIAAIADRVTLVVAGLPLALKGIAVNAEVG
EEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]