Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is hflX [H]

Identifier: 119773889

GI number: 119773889

Start: 926250

End: 927581

Strand: Direct

Name: hflX [H]

Synonym: Sama_0751

Alternate gene names: 119773889

Gene position: 926250-927581 (Clockwise)

Preceding gene: 119773886

Following gene: 119773891

Centisome position: 21.51

GC content: 58.11

Gene sequence:

>1332_bases
ATGCCCCCAATCCAGGAACAAGTTGTAACCCGTGCGCTGCTCATCTCCATCCATACCCCCAACATAGGTGCCAAGGAGGT
TGAACGTTCCCTTGCGGAGCTGGCCCGACTGGTGAGCACCCTGGGCTTTGCCGTGTATGCCACCGAGACTCAGAGGCAGC
AATCTACCAAGCGCCTGTCGGTGCTTGGCACAGGCAAGCTGGAGCAGCTGGCCCGGATGACAGGCGCCTTGGATGAAGCG
GAGGACTCGCTCGTCAACATAGATGAGGCAGGGTTGGAGTCTTTTCTGGCGGGCAACCAGCGCCAGCATGCCAATGTGGT
GGTATTCGACTGTGACTTAAGCCCAATGCAGCTTAGAAATCTGGAAGATGCACTTGGGGTTGAGGTGTTCGACCGAAGCG
GCATCATCATCGAGATTTTCAGTCGCCATGCCAGCAGTAAAACCGCGCGCTTGCAGGTGGAGCTGGCCCGGCTGAATTAT
TTAACTCCCCGGGTTCGCCGTGAGCACGCGGGGGACCGTCAGCGCACCGGCGGACGCAGCGTGGGGGAGAGTGCCATCGA
GCTTGAGCGCCGCGCCATTCGTGACAAGCAGGCGGAGCTGAGACGCGAGCTCAAAAAGGTACAGGAGGTAATGCAGGAGC
AAAAAAGCAGTCGCATGGATACGCCATCGGCTGCGCTGGTGGGGTATACCAACGCCGGTAAGTCCTCCCTGATGCGAGCG
CTGACCGGCTCAGAGGTGCTGGTGGAAAACAAACTCTTTGCCACCCTGGATACCACGGTCAGGGCGCTCTCGCCCCAGAC
CCAGCCGCGGATTTTGATTTCGGACACCGTAGGTTTTATCAATAAGCTGCCCCATGATTTGGTGCCGGCGTTTCACTCTA
CGCTGGAAGAAGCCAAAGACGCCAGTTTGCTGCTGTATGTGGTGGACGCCAGTGATGCGGATTTTCGCGCACAGCTTGAG
GTGGTGCGCAATGTGCTTGGGCAAAGCAAGCTGGCTGGAAAAGATAAGTTACTGCTTTTGAATAAGGTTGACTGCTTAAG
CGACGAGGCGCGCTCGGCATTGGCGCAGGAGTTCCCCGATGCGCTTCAAATCAGTGCCTTGAGTCAAGAGGATGTGGCCA
GGGTCCATCAGGCTATAGTGGATGCCATCGCCAATCAGCTGCTCAGTGCCTGTTTTAACATTCCCTACGCCGCCAGTGCC
CTGATGGGCGAGGTACATGGCAGGATGCAGATCATCGACGAGGCATACCATGAGTCGGGTCTGCGCATCACGGTGCGCGG
CCGCAGCGCCGATCTGGACAGGCTGAACAAGCGCTTGCAGACCGGCGGTTGA

Upstream 100 bases:

>100_bases
ATTCTTGGGTGTATCTCTCGTATAAAGTCGGCATCACAGCCAGGATATTGTGCTGTGGAGTCTCCCGCCTGAATCAGGTC
TGCCCTCGCTGTGAGCCACT

Downstream 100 bases:

>100_bases
TACCATGCGAAGCGTTGTTTGATGAGCAGGAGTGGTGTCTCTGCCATTAAAGTGCAAGGGACGCATCCCAACGAAAAGGG
CAGCCTGAGCTGCCCTTTAC

Product: GTP-binding protein HflX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MPPIQEQVVTRALLISIHTPNIGAKEVERSLAELARLVSTLGFAVYATETQRQQSTKRLSVLGTGKLEQLARMTGALDEA
EDSLVNIDEAGLESFLAGNQRQHANVVVFDCDLSPMQLRNLEDALGVEVFDRSGIIIEIFSRHASSKTARLQVELARLNY
LTPRVRREHAGDRQRTGGRSVGESAIELERRAIRDKQAELRRELKKVQEVMQEQKSSRMDTPSAALVGYTNAGKSSLMRA
LTGSEVLVENKLFATLDTTVRALSPQTQPRILISDTVGFINKLPHDLVPAFHSTLEEAKDASLLLYVVDASDADFRAQLE
VVRNVLGQSKLAGKDKLLLLNKVDCLSDEARSALAQEFPDALQISALSQEDVARVHQAIVDAIANQLLSACFNIPYAASA
LMGEVHGRMQIIDEAYHESGLRITVRGRSADLDRLNKRLQTGG

Sequences:

>Translated_443_residues
MPPIQEQVVTRALLISIHTPNIGAKEVERSLAELARLVSTLGFAVYATETQRQQSTKRLSVLGTGKLEQLARMTGALDEA
EDSLVNIDEAGLESFLAGNQRQHANVVVFDCDLSPMQLRNLEDALGVEVFDRSGIIIEIFSRHASSKTARLQVELARLNY
LTPRVRREHAGDRQRTGGRSVGESAIELERRAIRDKQAELRRELKKVQEVMQEQKSSRMDTPSAALVGYTNAGKSSLMRA
LTGSEVLVENKLFATLDTTVRALSPQTQPRILISDTVGFINKLPHDLVPAFHSTLEEAKDASLLLYVVDASDADFRAQLE
VVRNVLGQSKLAGKDKLLLLNKVDCLSDEARSALAQEFPDALQISALSQEDVARVHQAIVDAIANQLLSACFNIPYAASA
LMGEVHGRMQIIDEAYHESGLRITVRGRSADLDRLNKRLQTGG
>Mature_442_residues
PPIQEQVVTRALLISIHTPNIGAKEVERSLAELARLVSTLGFAVYATETQRQQSTKRLSVLGTGKLEQLARMTGALDEAE
DSLVNIDEAGLESFLAGNQRQHANVVVFDCDLSPMQLRNLEDALGVEVFDRSGIIIEIFSRHASSKTARLQVELARLNYL
TPRVRREHAGDRQRTGGRSVGESAIELERRAIRDKQAELRRELKKVQEVMQEQKSSRMDTPSAALVGYTNAGKSSLMRAL
TGSEVLVENKLFATLDTTVRALSPQTQPRILISDTVGFINKLPHDLVPAFHSTLEEAKDASLLLYVVDASDADFRAQLEV
VRNVLGQSKLAGKDKLLLLNKVDCLSDEARSALAQEFPDALQISALSQEDVARVHQAIVDAIANQLLSACFNIPYAASAL
MGEVHGRMQIIDEAYHESGLRITVRGRSADLDRLNKRLQTGG

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310124269, Length=219, Percent_Identity=32.8767123287671, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI310124267, Length=219, Percent_Identity=32.8767123287671, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI310124171, Length=219, Percent_Identity=32.8767123287671, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI310124169, Length=219, Percent_Identity=32.8767123287671, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI310133118, Length=219, Percent_Identity=32.8767123287671, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI310133116, Length=219, Percent_Identity=32.8767123287671, Blast_Score=105, Evalue=9e-23,
Organism=Escherichia coli, GI1790615, Length=343, Percent_Identity=35.8600583090379, Blast_Score=196, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17561038, Length=408, Percent_Identity=28.4313725490196, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24650079, Length=351, Percent_Identity=31.3390313390313, Blast_Score=120, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009022
- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 48735; Mature: 48604

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPIQEQVVTRALLISIHTPNIGAKEVERSLAELARLVSTLGFAVYATETQRQQSTKRLS
CCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHH
VLGTGKLEQLARMTGALDEAEDSLVNIDEAGLESFLAGNQRQHANVVVFDCDLSPMQLRN
EECCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHC
LEDALGVEVFDRSGIIIEIFSRHASSKTARLQVELARLNYLTPRVRREHAGDRQRTGGRS
HHHHHCCEEECCCCCEEEEHHHCCCCCHHEEEEEHHHHHHHCHHHHHHHCCCHHHCCCCH
VGESAIELERRAIRDKQAELRRELKKVQEVMQEQKSSRMDTPSAALVGYTNAGKSSLMRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHH
LTGSEVLVENKLFATLDTTVRALSPQTQPRILISDTVGFINKLPHDLVPAFHSTLEEAKD
HCCCHHEECCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHCCC
ASLLLYVVDASDADFRAQLEVVRNVLGQSKLAGKDKLLLLNKVDCLSDEARSALAQEFPD
CEEEEEEEECCCCCHHHHHHHHHHHHCCHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCH
ALQISALSQEDVARVHQAIVDAIANQLLSACFNIPYAASALMGEVHGRMQIIDEAYHESG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LRITVRGRSADLDRLNKRLQTGG
CEEEEECCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
PPIQEQVVTRALLISIHTPNIGAKEVERSLAELARLVSTLGFAVYATETQRQQSTKRLS
CCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHH
VLGTGKLEQLARMTGALDEAEDSLVNIDEAGLESFLAGNQRQHANVVVFDCDLSPMQLRN
EECCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHC
LEDALGVEVFDRSGIIIEIFSRHASSKTARLQVELARLNYLTPRVRREHAGDRQRTGGRS
HHHHHCCEEECCCCCEEEEHHHCCCCCHHEEEEEHHHHHHHCHHHHHHHCCCHHHCCCCH
VGESAIELERRAIRDKQAELRRELKKVQEVMQEQKSSRMDTPSAALVGYTNAGKSSLMRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHH
LTGSEVLVENKLFATLDTTVRALSPQTQPRILISDTVGFINKLPHDLVPAFHSTLEEAKD
HCCCHHEECCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHCCC
ASLLLYVVDASDADFRAQLEVVRNVLGQSKLAGKDKLLLLNKVDCLSDEARSALAQEFPD
CEEEEEEEECCCCCHHHHHHHHHHHHCCHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCH
ALQISALSQEDVARVHQAIVDAIANQLLSACFNIPYAASALMGEVHGRMQIIDEAYHESG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LRITVRGRSADLDRLNKRLQTGG
CEEEEECCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]