Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773891

Identifier: 119773891

GI number: 119773891

Start: 929596

End: 931323

Strand: Direct

Name: 119773891

Synonym: Sama_0753

Alternate gene names: NA

Gene position: 929596-931323 (Clockwise)

Preceding gene: 119773889

Following gene: 119773896

Centisome position: 21.59

GC content: 48.96

Gene sequence:

>1728_bases
ATGGCGCTTGCACAACCCTATGATCCTTCCCGCGACGAGATTTTCTGGCGAACCGCTGTTGCCAACATTCGTACGGGGCT
TGAAAACTTCAACATGCTCACGCCAAAGTTCAACATTGAACCTCACCATCGGATTTCATCGGCGGGTTCCTGTTTTGCTC
AGCATATAGGTAACTGGTTGACGCAAAATGATTACTCTTATAATAGGAGCCAATTAAACTCCGATGAAGTCTCCAGCTTT
GCCTTTGGCAATATCTACACCCCTCGTTCGTTACTTCAGTGGTTTGTATGTTCCGATGATGAATTATCGGAGCACAGTGT
GTACTTCGAGGCACAGTCCAGCCGTTACTTCGACTTGTTATTACCAAAAGTTGCTGACGCGGGCTATCCGTCACTGGATG
AATTACTGGCGTTCAGGACGCTGGTGATGGAGGAAACCCGAGCTCAGTTGGCACAAAGTGAATGTTTTATTTTTACACTT
GGACTGATTGAGACCTGGGTCGATCGCAACGGCATTTGTTATCCAAGTTGCCCCGGGGTGAAGTTTGGTGAGTATGATCC
GGAGAAATACCAACTTAAGGTGTTTAATTATCAGGAAATATTTTCCGACCTCAGTGAGCTTTTCAAGCAAATCAAGGTTG
TAAACCCTGACATACGTTTTGTGCTGACTGTATCTCCCGTCCCTTTGACGGCTACAGCCACAGATGACCACGTATTGGTG
GCTAATGGCTATTCAAAATCGGTCCTGCGCGCAGTTGCGGGGGCATTCTGCCAAGGGCGGGATGATGTCAGCTACTTTCC
ATCATTTGAACTTATCACCACCCCCTTACCGGGGGATTTTCGCTATCTGGAAAATCGGCGCACTGTATCTGAGAAAGGCG
TTGGCTATGTGATGCGGCATTGGGCCACGTCGCTAAATGGTAAGCAAACACCAGATGCAAGCCACATCGAAGCTGCCTGC
GATGATGAAATGCTGGATGCCATTAAGAAGGACACATCAAGTGAACTGGGCACACCGCTAACCCTCATTGGTGATAGCCA
TTTTGGCAAGTTGGCCAAGTCTTTTGAGCGGCTTGGACAGTCCTGCTGTGGTGGCATGGTGATGAATGGTTCCGGATTCG
CTGAGCATAAATTTACCCTGACCAAGGATGCGGACATCATGGTGCCGCTCGAAAGCGCAGAGTCCCGACGCCTGTGGCAG
CCCATAATTAACAACCTCGACAGCTTATGCAGGGCTCAACGACTGTCGGAGTCCTGGGTATTGACCAATATTGGGCTGCA
AACCCACAAGACAGTACCTGAGTTTATTCAATGGATGAGAGCTGAGCGTCCAGAGCGGTTGAATCAGATAGATATTGAGG
ACTATTTGGAGTTCTTTGACGCCAACATGCGGGATCAAATGACCATAGTATTTCGCCTCAAGGAACAGGGGCACAGGGTT
ATGGTGATTTCAGACACCCCATTCTGGCAGTACTTTGAAGACTCCAAGGGCATGGCCCCCTTCGTGATGGCCTACATGGA
TGCGATGGAATATGCGTGGCAGCAGATGGGGGTTGAGTTTTTTCATGCAGCGCGCGTTTTTAACGAAGAGGTAAACGACC
CAATGCCTTACGCCTCAACTTTCATTTCTGCAGACGGCAGTCGGGATTACTTCCATGGTGGGGATTCTTATTACGATTGG
CTCGCCGGGAAATTATTGCCATTACTGAAAGCCTGCCGTATCTGGTGA

Upstream 100 bases:

>100_bases
TTGATTTGTGCAGGGTTTTAGGAAATTTGCCCCATGGCCAAAGTTTTGGCTATGGGGCCAACGACTGGAATGGCTCAACT
CTGACAAGGAGGTTTAGACC

Downstream 100 bases:

>100_bases
TTTCTCATAATAGGCACTGTCGTCCTTTATTTTTTATCAACCTAAACAGATAGGTAAGAATTTAAGATGTCACAGTATGA
GGAACGGATAGAGCGGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Gscfa Domain Protein; GSCFA Domain Protein; GSCFA Family Protein; GSCFA Family

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MALAQPYDPSRDEIFWRTAVANIRTGLENFNMLTPKFNIEPHHRISSAGSCFAQHIGNWLTQNDYSYNRSQLNSDEVSSF
AFGNIYTPRSLLQWFVCSDDELSEHSVYFEAQSSRYFDLLLPKVADAGYPSLDELLAFRTLVMEETRAQLAQSECFIFTL
GLIETWVDRNGICYPSCPGVKFGEYDPEKYQLKVFNYQEIFSDLSELFKQIKVVNPDIRFVLTVSPVPLTATATDDHVLV
ANGYSKSVLRAVAGAFCQGRDDVSYFPSFELITTPLPGDFRYLENRRTVSEKGVGYVMRHWATSLNGKQTPDASHIEAAC
DDEMLDAIKKDTSSELGTPLTLIGDSHFGKLAKSFERLGQSCCGGMVMNGSGFAEHKFTLTKDADIMVPLESAESRRLWQ
PIINNLDSLCRAQRLSESWVLTNIGLQTHKTVPEFIQWMRAERPERLNQIDIEDYLEFFDANMRDQMTIVFRLKEQGHRV
MVISDTPFWQYFEDSKGMAPFVMAYMDAMEYAWQQMGVEFFHAARVFNEEVNDPMPYASTFISADGSRDYFHGGDSYYDW
LAGKLLPLLKACRIW

Sequences:

>Translated_575_residues
MALAQPYDPSRDEIFWRTAVANIRTGLENFNMLTPKFNIEPHHRISSAGSCFAQHIGNWLTQNDYSYNRSQLNSDEVSSF
AFGNIYTPRSLLQWFVCSDDELSEHSVYFEAQSSRYFDLLLPKVADAGYPSLDELLAFRTLVMEETRAQLAQSECFIFTL
GLIETWVDRNGICYPSCPGVKFGEYDPEKYQLKVFNYQEIFSDLSELFKQIKVVNPDIRFVLTVSPVPLTATATDDHVLV
ANGYSKSVLRAVAGAFCQGRDDVSYFPSFELITTPLPGDFRYLENRRTVSEKGVGYVMRHWATSLNGKQTPDASHIEAAC
DDEMLDAIKKDTSSELGTPLTLIGDSHFGKLAKSFERLGQSCCGGMVMNGSGFAEHKFTLTKDADIMVPLESAESRRLWQ
PIINNLDSLCRAQRLSESWVLTNIGLQTHKTVPEFIQWMRAERPERLNQIDIEDYLEFFDANMRDQMTIVFRLKEQGHRV
MVISDTPFWQYFEDSKGMAPFVMAYMDAMEYAWQQMGVEFFHAARVFNEEVNDPMPYASTFISADGSRDYFHGGDSYYDW
LAGKLLPLLKACRIW
>Mature_574_residues
ALAQPYDPSRDEIFWRTAVANIRTGLENFNMLTPKFNIEPHHRISSAGSCFAQHIGNWLTQNDYSYNRSQLNSDEVSSFA
FGNIYTPRSLLQWFVCSDDELSEHSVYFEAQSSRYFDLLLPKVADAGYPSLDELLAFRTLVMEETRAQLAQSECFIFTLG
LIETWVDRNGICYPSCPGVKFGEYDPEKYQLKVFNYQEIFSDLSELFKQIKVVNPDIRFVLTVSPVPLTATATDDHVLVA
NGYSKSVLRAVAGAFCQGRDDVSYFPSFELITTPLPGDFRYLENRRTVSEKGVGYVMRHWATSLNGKQTPDASHIEAACD
DEMLDAIKKDTSSELGTPLTLIGDSHFGKLAKSFERLGQSCCGGMVMNGSGFAEHKFTLTKDADIMVPLESAESRRLWQP
IINNLDSLCRAQRLSESWVLTNIGLQTHKTVPEFIQWMRAERPERLNQIDIEDYLEFFDANMRDQMTIVFRLKEQGHRVM
VISDTPFWQYFEDSKGMAPFVMAYMDAMEYAWQQMGVEFFHAARVFNEEVNDPMPYASTFISADGSRDYFHGGDSYYDWL
AGKLLPLLKACRIW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65669; Mature: 65538

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAQPYDPSRDEIFWRTAVANIRTGLENFNMLTPKFNIEPHHRISSAGSCFAQHIGNWL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH
TQNDYSYNRSQLNSDEVSSFAFGNIYTPRSLLQWFVCSDDELSEHSVYFEAQSSRYFDLL
CCCCCCCCHHHCCHHHHHHEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHH
LPKVADAGYPSLDELLAFRTLVMEETRAQLAQSECFIFTLGLIETWVDRNGICYPSCPGV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCCCCCC
KFGEYDPEKYQLKVFNYQEIFSDLSELFKQIKVVNPDIRFVLTVSPVPLTATATDDHVLV
CCCCCCCCCEEEEEECHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCEEEECCCCEEEE
ANGYSKSVLRAVAGAFCQGRDDVSYFPSFELITTPLPGDFRYLENRRTVSEKGVGYVMRH
ECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCHHHCCHHHHHHH
WATSLNGKQTPDASHIEAACDDEMLDAIKKDTSSELGTPLTLIGDSHFGKLAKSFERLGQ
HHHHCCCCCCCCHHHHHHHCCHHHHHHHHHCCHHHHCCCEEEECCCHHHHHHHHHHHHHH
SCCGGMVMNGSGFAEHKFTLTKDADIMVPLESAESRRLWQPIINNLDSLCRAQRLSESWV
HHHCCEEECCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
LTNIGLQTHKTVPEFIQWMRAERPERLNQIDIEDYLEFFDANMRDQMTIVFRLKEQGHRV
EEECCCCCCCCHHHHHHHHHHCCCHHCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCEE
MVISDTPFWQYFEDSKGMAPFVMAYMDAMEYAWQQMGVEFFHAARVFNEEVNDPMPYAST
EEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
FISADGSRDYFHGGDSYYDWLAGKLLPLLKACRIW
HEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALAQPYDPSRDEIFWRTAVANIRTGLENFNMLTPKFNIEPHHRISSAGSCFAQHIGNWL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH
TQNDYSYNRSQLNSDEVSSFAFGNIYTPRSLLQWFVCSDDELSEHSVYFEAQSSRYFDLL
CCCCCCCCHHHCCHHHHHHEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHH
LPKVADAGYPSLDELLAFRTLVMEETRAQLAQSECFIFTLGLIETWVDRNGICYPSCPGV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCCCCCC
KFGEYDPEKYQLKVFNYQEIFSDLSELFKQIKVVNPDIRFVLTVSPVPLTATATDDHVLV
CCCCCCCCCEEEEEECHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCEEEECCCCEEEE
ANGYSKSVLRAVAGAFCQGRDDVSYFPSFELITTPLPGDFRYLENRRTVSEKGVGYVMRH
ECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCHHHCCHHHHHHH
WATSLNGKQTPDASHIEAACDDEMLDAIKKDTSSELGTPLTLIGDSHFGKLAKSFERLGQ
HHHHCCCCCCCCHHHHHHHCCHHHHHHHHHCCHHHHCCCEEEECCCHHHHHHHHHHHHHH
SCCGGMVMNGSGFAEHKFTLTKDADIMVPLESAESRRLWQPIINNLDSLCRAQRLSESWV
HHHCCEEECCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
LTNIGLQTHKTVPEFIQWMRAERPERLNQIDIEDYLEFFDANMRDQMTIVFRLKEQGHRV
EEECCCCCCCCHHHHHHHHHHCCCHHCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCEE
MVISDTPFWQYFEDSKGMAPFVMAYMDAMEYAWQQMGVEFFHAARVFNEEVNDPMPYAST
EEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
FISADGSRDYFHGGDSYYDWLAGKLLPLLKACRIW
HEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA