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The map label for this gene is 119773874

Identifier: 119773874

GI number: 119773874

Start: 903625

End: 904713

Strand: Direct

Name: 119773874

Synonym: Sama_0736

Alternate gene names: NA

Gene position: 903625-904713 (Clockwise)

Preceding gene: 119773873

Following gene: 119773876

Centisome position: 20.98

GC content: 55.0

Gene sequence:

>1089_bases
ATGAAAAAGCAATTAACCTGTCCCGGCTGCCAGCATCAGAGTTTCAGGGTGTTTGATTTTCACGGTGAGCAGGTGGATAC
CTGCGACAAGTGTGCCGGTCTCTGGTTTGAAAATGGTGAACTGGACCGGGCGCTGTCCTCGGCCGACAACGGCGATGATG
CCGTAGTGCTTGAGCAGTCCATGGGGGCGCATCTGGGGTGCTCAGAACGTCGCTGTCACGACTGCGGCTCCTCTCTGGAG
CGCTATCACCTGATGCAGGAGTTTGAAATCGAAATTGACGTATGCCCCTCTTGCCGCGGTGTCTGGCTCGACAAGCATGA
GTGCGACAAGGTGGTGCAGTCTCCCCGGGTTCGTCAGGCATTGGCAGAGCTTGATGGCAAAATCAGTGTCAAAACCTGGC
TGTTCCAGTTTTTGTCGCAAATGCCGGTGGAGTTCAATCTCAAACCCAAAACCAAACCCGTGGTGACCTGGTGGCTGCTG
GGATTGAATTTGGTGATTTTTGGGATTTATGGTTTCGACTTGTCGATGATAGATCCCATCTTCGAGCAGTTTGCCCTCGT
ACCGAATCAGGTGATGCACGGCAGCCATGTGTGGACCCTGTTCAGTCATATGTTCCTCCACGGCGACATCATTCACCTCG
CGGGCAACATGTACTTCCTCTACGTGGTGGGCGACAACCTGGAAGATGCCCTTGGTCGGGCGCGCTTTTTGGGACTGTAT
CTGGTGTGTGGTCTCGCGGCTGCGGCCGCACAAATCATCTCCGAGCCCGGCAGCGATATCTACATGGTGGGCGCCAGCGG
TGCCATTGCCGGCTTGTTCGGCATGTACCTGCTGTGGTTCCGCTATGCCAGCCTGACCTTTATGTTCATCGTGTTTCAAA
AGAAGGTGTCACCTCTGGTGTTCTTCGGCATTTGGCTCGCATTGAACATCTTCGGTTTGTATATGGCGGGTGAGGGCGTG
GCTTACTGGGCCCATATAGGCGGTTTTGTGGCGGGGCTTATCATCGGCAAGCTGATGTATACCAGCGTGATGGCAGCCAA
CCCCATGCTGGCGCTGATGAACTCCCCTGAGGTCAGGGTCAGCCGTTAA

Upstream 100 bases:

>100_bases
TGATAGCGTCCATGGAACAGCAAACCTTACCGGCACTGAAACGTGATTATGAGGCGCTCGGTGAATCGCTGCGCCGGGCT
GGGGTATTGGAGGACTCGAA

Downstream 100 bases:

>100_bases
GCTTAATGAGAAAGGCGCCACAGGCGCCTTTTTTGATGCTCATTTCGCCCTTTGGCCCTGCTGGAAGTTAAAAACGTCTC
GGGTTAAGTTCCCAATATTC

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase; Integral Membrane Protein; Rhomboid-Like Protein; S54 Family Peptidase; Rhomboid Family Membrane Protein; Peptidase Protein; Rhomboid Family Transmembrane Protein; Transmembrane Rhomboid Family Protein; Subfamily; Serine Peptidase; Rhomboid Serine Protease; Membrane Spanning Protein; Membrane Associated Serine Protease; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKKQLTCPGCQHQSFRVFDFHGEQVDTCDKCAGLWFENGELDRALSSADNGDDAVVLEQSMGAHLGCSERRCHDCGSSLE
RYHLMQEFEIEIDVCPSCRGVWLDKHECDKVVQSPRVRQALAELDGKISVKTWLFQFLSQMPVEFNLKPKTKPVVTWWLL
GLNLVIFGIYGFDLSMIDPIFEQFALVPNQVMHGSHVWTLFSHMFLHGDIIHLAGNMYFLYVVGDNLEDALGRARFLGLY
LVCGLAAAAAQIISEPGSDIYMVGASGAIAGLFGMYLLWFRYASLTFMFIVFQKKVSPLVFFGIWLALNIFGLYMAGEGV
AYWAHIGGFVAGLIIGKLMYTSVMAANPMLALMNSPEVRVSR

Sequences:

>Translated_362_residues
MKKQLTCPGCQHQSFRVFDFHGEQVDTCDKCAGLWFENGELDRALSSADNGDDAVVLEQSMGAHLGCSERRCHDCGSSLE
RYHLMQEFEIEIDVCPSCRGVWLDKHECDKVVQSPRVRQALAELDGKISVKTWLFQFLSQMPVEFNLKPKTKPVVTWWLL
GLNLVIFGIYGFDLSMIDPIFEQFALVPNQVMHGSHVWTLFSHMFLHGDIIHLAGNMYFLYVVGDNLEDALGRARFLGLY
LVCGLAAAAAQIISEPGSDIYMVGASGAIAGLFGMYLLWFRYASLTFMFIVFQKKVSPLVFFGIWLALNIFGLYMAGEGV
AYWAHIGGFVAGLIIGKLMYTSVMAANPMLALMNSPEVRVSR
>Mature_362_residues
MKKQLTCPGCQHQSFRVFDFHGEQVDTCDKCAGLWFENGELDRALSSADNGDDAVVLEQSMGAHLGCSERRCHDCGSSLE
RYHLMQEFEIEIDVCPSCRGVWLDKHECDKVVQSPRVRQALAELDGKISVKTWLFQFLSQMPVEFNLKPKTKPVVTWWLL
GLNLVIFGIYGFDLSMIDPIFEQFALVPNQVMHGSHVWTLFSHMFLHGDIIHLAGNMYFLYVVGDNLEDALGRARFLGLY
LVCGLAAAAAQIISEPGSDIYMVGASGAIAGLFGMYLLWFRYASLTFMFIVFQKKVSPLVFFGIWLALNIFGLYMAGEGV
AYWAHIGGFVAGLIIGKLMYTSVMAANPMLALMNSPEVRVSR

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40487; Mature: 40487

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQLTCPGCQHQSFRVFDFHGEQVDTCDKCAGLWFENGELDRALSSADNGDDAVVLEQS
CCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCEECCCCHHHHHHCCCCCCCEEEEECC
MGAHLGCSERRCHDCGSSLERYHLMQEFEIEIDVCPSCRGVWLDKHECDKVVQSPRVRQA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHH
LAELDGKISVKTWLFQFLSQMPVEFNLKPKTKPVVTWWLLGLNLVIFGIYGFDLSMIDPI
HHHCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
FEQFALVPNQVMHGSHVWTLFSHMFLHGDIIHLAGNMYFLYVVGDNLEDALGRARFLGLY
HHHHHHCCHHHHCCCHHHHHHHHHHHHCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHH
LVCGLAAAAAQIISEPGSDIYMVGASGAIAGLFGMYLLWFRYASLTFMFIVFQKKVSPLV
HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FFGIWLALNIFGLYMAGEGVAYWAHIGGFVAGLIIGKLMYTSVMAANPMLALMNSPEVRV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEE
SR
CC
>Mature Secondary Structure
MKKQLTCPGCQHQSFRVFDFHGEQVDTCDKCAGLWFENGELDRALSSADNGDDAVVLEQS
CCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCEECCCCHHHHHHCCCCCCCEEEEECC
MGAHLGCSERRCHDCGSSLERYHLMQEFEIEIDVCPSCRGVWLDKHECDKVVQSPRVRQA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHH
LAELDGKISVKTWLFQFLSQMPVEFNLKPKTKPVVTWWLLGLNLVIFGIYGFDLSMIDPI
HHHCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
FEQFALVPNQVMHGSHVWTLFSHMFLHGDIIHLAGNMYFLYVVGDNLEDALGRARFLGLY
HHHHHHCCHHHHCCCHHHHHHHHHHHHCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHH
LVCGLAAAAAQIISEPGSDIYMVGASGAIAGLFGMYLLWFRYASLTFMFIVFQKKVSPLV
HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FFGIWLALNIFGLYMAGEGVAYWAHIGGFVAGLIIGKLMYTSVMAANPMLALMNSPEVRV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEE
SR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA