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The map label for this gene is adrA [H]

Identifier: 119773670

GI number: 119773670

Start: 653396

End: 654574

Strand: Direct

Name: adrA [H]

Synonym: Sama_0530

Alternate gene names: 119773670

Gene position: 653396-654574 (Clockwise)

Preceding gene: 119773669

Following gene: 119773671

Centisome position: 15.17

GC content: 54.28

Gene sequence:

>1179_bases
ATGGACGCTTACACCCTTCACATAGCAACGGCCTTTGCCAGTGCCATGATGACCATTAGCCTGCTGGGGCTCTTTATCGC
CAGCCCAAGAGAGTACAGCCTGCTTGACTGGTCCTTTGCCGGATTGTGTTTTTTCGCAACCAATGGCTTGACGGTGTTGG
TGTTTCACTCTGAGCAGCCATTTTGGGTGGCACCGGTACTTACCAACGCCTTCTATTTTGCCGGACACTGTGCCCTTCTG
GTGGGGGTGAGGCGTTACTTCGGCCTGAAAACCCACTGGCAATTTGGTGTGGGGTTGGCCCTCGTCATTGCGGCAGTGCA
CCTCTTACCTTGGGTGCAGGCATCCGTCGCTAACCGTCTGTTGCTGTTTTTCCCACTGCTGATGCTCATCAACAGCCTGA
CCATTTCCGTACTCTGGCGTTACGGCGGCAGGGAGCTGAGATTGGCGTGCATGCCACTGTTGGTGTTGGAGCTGTTGTTT
TTGCTGCAATTGTTATTGCGCACTCTGATCCTTGGCACAACCTCAGATATGAACCTGACCTACGCCGGGAGCCAGTTTTT
CCAAACCTCGGGTACGCTGGCGATTTTCGTCTTTTTAAGTCTGGGCACCATGGCCTGCGCCATGATGGTGATTCGCCGCC
AGGAGCTTGAGCTGAGGCAACTCACCACCATAGACCCCCTTACCGGCTGGTTCAATCGTCGCGCCCTGAATGACATTGCC
GTGCGTGAGTTTGAGCGCAGCGCCCGCACCTCCTCCGAGCTGGGGCTCCTGGTGCTGGATATAGACCATTTCAAGAAGAT
CAACGACACCTATGGCCACGTTGACGGCGATGAGGCGCTCAAGCATGTCACCAACACCTGTGCCTTATTACTGCGTGGCT
ACGACTACCTGTTCCGCTTTGGCGGTGAAGAATTTGTGATCCTCTTACCCGGAAGTGACCATGAGTGCACTCGAAAATTG
GCCAATCGGTTAAGGTTAAAAATTCAAAGCGAGCCCGTTACCCTTGGACAAGACAGAGTCGCGTTGACCATCAGCATAGG
TGTGGCTCAGCGACGTGAACGGGATCAAAGCTGGTTACAAATCCTGGAGCGGGCCGATTCAGCGCTTTACCATGCCAAAC
AATCAGGGCGTGATCGGGTTGCATTTCATAATGGCCTGGAGCTGAGCCAGGTCAGCTAG

Upstream 100 bases:

>100_bases
TTATTGGAGTTTGCCAGTACGGCTGGGGTAAGATGTGGCCATAACGCCTGATAGGGTACTGCGACCTCAATAGCCGCAGT
ACACAAAAGAGAGAGTGAGA

Downstream 100 bases:

>100_bases
TTTGGTGCGGTAACAGCAGAATGCGGGCTTGGTTTTTCGCAAACACTTGCAGGAAAGCGTGTTTGGGTCACATGGTGATT
CTTGCACTTTGGCACACAGC

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MDAYTLHIATAFASAMMTISLLGLFIASPREYSLLDWSFAGLCFFATNGLTVLVFHSEQPFWVAPVLTNAFYFAGHCALL
VGVRRYFGLKTHWQFGVGLALVIAAVHLLPWVQASVANRLLLFFPLLMLINSLTISVLWRYGGRELRLACMPLLVLELLF
LLQLLLRTLILGTTSDMNLTYAGSQFFQTSGTLAIFVFLSLGTMACAMMVIRRQELELRQLTTIDPLTGWFNRRALNDIA
VREFERSARTSSELGLLVLDIDHFKKINDTYGHVDGDEALKHVTNTCALLLRGYDYLFRFGGEEFVILLPGSDHECTRKL
ANRLRLKIQSEPVTLGQDRVALTISIGVAQRRERDQSWLQILERADSALYHAKQSGRDRVAFHNGLELSQVS

Sequences:

>Translated_392_residues
MDAYTLHIATAFASAMMTISLLGLFIASPREYSLLDWSFAGLCFFATNGLTVLVFHSEQPFWVAPVLTNAFYFAGHCALL
VGVRRYFGLKTHWQFGVGLALVIAAVHLLPWVQASVANRLLLFFPLLMLINSLTISVLWRYGGRELRLACMPLLVLELLF
LLQLLLRTLILGTTSDMNLTYAGSQFFQTSGTLAIFVFLSLGTMACAMMVIRRQELELRQLTTIDPLTGWFNRRALNDIA
VREFERSARTSSELGLLVLDIDHFKKINDTYGHVDGDEALKHVTNTCALLLRGYDYLFRFGGEEFVILLPGSDHECTRKL
ANRLRLKIQSEPVTLGQDRVALTISIGVAQRRERDQSWLQILERADSALYHAKQSGRDRVAFHNGLELSQVS
>Mature_392_residues
MDAYTLHIATAFASAMMTISLLGLFIASPREYSLLDWSFAGLCFFATNGLTVLVFHSEQPFWVAPVLTNAFYFAGHCALL
VGVRRYFGLKTHWQFGVGLALVIAAVHLLPWVQASVANRLLLFFPLLMLINSLTISVLWRYGGRELRLACMPLLVLELLF
LLQLLLRTLILGTTSDMNLTYAGSQFFQTSGTLAIFVFLSLGTMACAMMVIRRQELELRQLTTIDPLTGWFNRRALNDIA
VREFERSARTSSELGLLVLDIDHFKKINDTYGHVDGDEALKHVTNTCALLLRGYDYLFRFGGEEFVILLPGSDHECTRKL
ANRLRLKIQSEPVTLGQDRVALTISIGVAQRRERDQSWLQILERADSALYHAKQSGRDRVAFHNGLELSQVS

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=243, Percent_Identity=32.0987654320988, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI145693134, Length=164, Percent_Identity=39.0243902439024, Blast_Score=112, Evalue=6e-26,
Organism=Escherichia coli, GI1787262, Length=171, Percent_Identity=36.8421052631579, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI87081881, Length=169, Percent_Identity=37.8698224852071, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787816, Length=163, Percent_Identity=33.1288343558282, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI87082007, Length=159, Percent_Identity=36.4779874213836, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1787541, Length=190, Percent_Identity=33.1578947368421, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1787802, Length=194, Percent_Identity=29.8969072164948, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788381, Length=171, Percent_Identity=29.8245614035088, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87081974, Length=155, Percent_Identity=28.3870967741935, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788085, Length=176, Percent_Identity=28.9772727272727, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1787056, Length=169, Percent_Identity=30.1775147928994, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 44140; Mature: 44140

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAYTLHIATAFASAMMTISLLGLFIASPREYSLLDWSFAGLCFFATNGLTVLVFHSEQP
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHCEEEEECCCCEEEEEECCCC
FWVAPVLTNAFYFAGHCALLVGVRRYFGLKTHWQFGVGLALVIAAVHLLPWVQASVANRL
EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFFPLLMLINSLTISVLWRYGGRELRLACMPLLVLELLFLLQLLLRTLILGTTSDMNLT
HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
YAGSQFFQTSGTLAIFVFLSLGTMACAMMVIRRQELELRQLTTIDPLTGWFNRRALNDIA
ECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VREFERSARTSSELGLLVLDIDHFKKINDTYGHVDGDEALKHVTNTCALLLRGYDYLFRF
HHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GGEEFVILLPGSDHECTRKLANRLRLKIQSEPVTLGQDRVALTISIGVAQRRERDQSWLQ
CCCEEEEEECCCCCHHHHHHHHHHEEEECCCCEEECCCCEEEEEEECHHHHHHHHHHHHH
ILERADSALYHAKQSGRDRVAFHNGLELSQVS
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MDAYTLHIATAFASAMMTISLLGLFIASPREYSLLDWSFAGLCFFATNGLTVLVFHSEQP
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHCEEEEECCCCEEEEEECCCC
FWVAPVLTNAFYFAGHCALLVGVRRYFGLKTHWQFGVGLALVIAAVHLLPWVQASVANRL
EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFFPLLMLINSLTISVLWRYGGRELRLACMPLLVLELLFLLQLLLRTLILGTTSDMNLT
HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
YAGSQFFQTSGTLAIFVFLSLGTMACAMMVIRRQELELRQLTTIDPLTGWFNRRALNDIA
ECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VREFERSARTSSELGLLVLDIDHFKKINDTYGHVDGDEALKHVTNTCALLLRGYDYLFRF
HHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GGEEFVILLPGSDHECTRKLANRLRLKIQSEPVTLGQDRVALTISIGVAQRRERDQSWLQ
CCCEEEEEECCCCCHHHHHHHHHHEEEECCCCEEECCCCEEEEEEECHHHHHHHHHHHHH
ILERADSALYHAKQSGRDRVAFHNGLELSQVS
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]