Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773669

Identifier: 119773669

GI number: 119773669

Start: 652541

End: 653227

Strand: Direct

Name: 119773669

Synonym: Sama_0529

Alternate gene names: NA

Gene position: 652541-653227 (Clockwise)

Preceding gene: 119773665

Following gene: 119773670

Centisome position: 15.15

GC content: 53.86

Gene sequence:

>687_bases
ATGAATACAAGAACCAGCGCAGATAAACGTGGCTTCAGTGGCGCACAGGTACTGCTCATTATTTTGGCCGTGATGTTACT
GACGGTCGTGACCAGTTTTGTGATTATCCGTAGCTATATTTTCCCAAGCCCATTCACCCCTGTGACTCTGAGCGCCAAAG
AGGAAAAGAAACTCGAGGCCAAGCTGGACACCCTGGGTTGGGATAGTCAACGGCCATCAAATAGAGACAGGCAAGGCAAT
GCCCAACGGGGAGACTCGGACCTGACTCCCGAACCCTACCGCGAGCATGATGGTGATCGGCAGGTGACTTTCAGCGAAAA
AGAGGTCAATGCCATGATTGGCCGCAGCCCGGAGTTCGCCGAGCGACTGGCGATTGATTTTTCAGACAACCTCGCCAGTG
CCAAACTGCTCATCCCCATTCCCAGAGACTTTCCCATCATGGCCGGTGAAACCCTGAGGGTGAATGCGGGGCTGGATATC
CATTTGGATCAGCGTCGCCGTCCTGTGGTGGCCCTGGTTGGGGTGAGTCTGATGGGCGTCCCCCTTCCCAATGCCTGGCT
AGGTAATATGAAGCAGGTGAATCTGGTGAGCGAGTTCGGTGACAGTGGTTTCTGGAATGCCTTTGCTGACGGGGTTGAAG
ACATAGAGATCCGTGAAGGCGAGCTGTATATCAAGCTCAAACCCTGA

Upstream 100 bases:

>100_bases
CGAAACGGCAGCGTGATTGACTCGTCTCGCCATTCGTGGTGCTGTCCTTTCGAGCGTCAGGGCGGTAACATCCCGGGCAA
AGACGATAGGGGACAAGTGG

Downstream 100 bases:

>100_bases
ACACGCTGTGGCCTTCACTGCCATGTGTGTTGGGATGTGGCTTGCTGCAGTGGCATGTATCGCCAAGCTTATTGGAGTTT
GCCAGTACGGCTGGGGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNTRTSADKRGFSGAQVLLIILAVMLLTVVTSFVIIRSYIFPSPFTPVTLSAKEEKKLEAKLDTLGWDSQRPSNRDRQGN
AQRGDSDLTPEPYREHDGDRQVTFSEKEVNAMIGRSPEFAERLAIDFSDNLASAKLLIPIPRDFPIMAGETLRVNAGLDI
HLDQRRRPVVALVGVSLMGVPLPNAWLGNMKQVNLVSEFGDSGFWNAFADGVEDIEIREGELYIKLKP

Sequences:

>Translated_228_residues
MNTRTSADKRGFSGAQVLLIILAVMLLTVVTSFVIIRSYIFPSPFTPVTLSAKEEKKLEAKLDTLGWDSQRPSNRDRQGN
AQRGDSDLTPEPYREHDGDRQVTFSEKEVNAMIGRSPEFAERLAIDFSDNLASAKLLIPIPRDFPIMAGETLRVNAGLDI
HLDQRRRPVVALVGVSLMGVPLPNAWLGNMKQVNLVSEFGDSGFWNAFADGVEDIEIREGELYIKLKP
>Mature_228_residues
MNTRTSADKRGFSGAQVLLIILAVMLLTVVTSFVIIRSYIFPSPFTPVTLSAKEEKKLEAKLDTLGWDSQRPSNRDRQGN
AQRGDSDLTPEPYREHDGDRQVTFSEKEVNAMIGRSPEFAERLAIDFSDNLASAKLLIPIPRDFPIMAGETLRVNAGLDI
HLDQRRRPVVALVGVSLMGVPLPNAWLGNMKQVNLVSEFGDSGFWNAFADGVEDIEIREGELYIKLKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25370; Mature: 25370

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRTSADKRGFSGAQVLLIILAVMLLTVVTSFVIIRSYIFPSPFTPVTLSAKEEKKLEA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHH
KLDTLGWDSQRPSNRDRQGNAQRGDSDLTPEPYREHDGDRQVTFSEKEVNAMIGRSPEFA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECHHHHHHHHCCCHHHH
ERLAIDFSDNLASAKLLIPIPRDFPIMAGETLRVNAGLDIHLDQRRRPVVALVGVSLMGV
HHEEECCCCCCCCCEEEEECCCCCCEECCCEEEECCCCEEEECCCCCCEEEEECHHHCCC
PLPNAWLGNMKQVNLVSEFGDSGFWNAFADGVEDIEIREGELYIKLKP
CCCCHHHCCCHHHHHHHHCCCCCCHHHHHCCCCCEEEECCEEEEEECC
>Mature Secondary Structure
MNTRTSADKRGFSGAQVLLIILAVMLLTVVTSFVIIRSYIFPSPFTPVTLSAKEEKKLEA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHH
KLDTLGWDSQRPSNRDRQGNAQRGDSDLTPEPYREHDGDRQVTFSEKEVNAMIGRSPEFA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECHHHHHHHHCCCHHHH
ERLAIDFSDNLASAKLLIPIPRDFPIMAGETLRVNAGLDIHLDQRRRPVVALVGVSLMGV
HHEEECCCCCCCCCEEEEECCCCCCEECCCEEEECCCCEEEECCCCCCEEEEECHHHCCC
PLPNAWLGNMKQVNLVSEFGDSGFWNAFADGVEDIEIREGELYIKLKP
CCCCHHHCCCHHHHHHHHCCCCCCHHHHHCCCCCEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA