Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773429

Identifier: 119773429

GI number: 119773429

Start: 341766

End: 343988

Strand: Reverse

Name: 119773429

Synonym: Sama_0288

Alternate gene names: NA

Gene position: 343988-341766 (Counterclockwise)

Preceding gene: 119773430

Following gene: 119773424

Centisome position: 7.99

GC content: 58.43

Gene sequence:

>2223_bases
ATGAACAAATTCCTGTTTGGTCTGCTCCTGACCAGCTGCTCTGCCCTGGGTGGCAACAGCCAGTACGTGAATCCCTTTAT
CGGTACCTCAAACTTCGGCGCTACCCATCCCGGGGCTCAGTACCCCAATGCCCTGGCCTCGGTGTCGCCGTTCAACGTGG
CCCATGGCGGCGAGCAAAATAAGTTTGAAAAAGACGCCGCCTGGAACTCCCGGGTGTATATCCATGAGAACCGCTATCTG
ACGGGCTTCAGCCACCTGAACTTAAGCGGCGTGGGTTGCCCCGATGCAGGCGTATTGCTACTGATGCCCACCACGGGCCC
GCTCGAACTGGACGCACGGGAATACGGCAGCAGTTACAGCAATGAGCAAGCCAGCCCCGGCTACTATAGCGCCCAGCTCA
ACAAATACGCCGTCAAGGCCGAAGTCACCAGCAGCCTGCGCACCGGCCTGAGCCGCTTCACCTTTCCGGCGGGGCAGTCC
AATGTGCTGCTCAATCTGGGGCTGGGACTGACCAATGAAACCGGCGCCAGCCTTAAGTGGGTGTCTGAGCAGGAAGTCGA
AGGCAGCCGTATGCTGGGCACCTTCTGCTACCACGACGAAGATGTGCGGCCGGTATTTTTTGTGGCCCGCTTCAGCAAGG
CACCCAAGACCTTTGGGGTGTGGAAAAAAATGCCGCGCTACCAGAATGTGGAAGCCGACTGGATTGGCTACAACGACAGC
ATTAAACCCTATCCGGGCTATCGTCAGCTCCTGTCCGGCGATGATATCGGTGCCTGGCTGAGCTTCGATACCCGCGAGCA
GGAGGCCATCGAGGTCAAGCTGGGCATCTCCTTTGTCAGCATGGAAAACGCTAGGGAGAATCTGGATACCGAGCAGCCCG
GGTTTGAGTTCGATAAGCTGCGGATTGAGGCGCAAAAGGCCTGGGACGCCCTGCTGGACCGGGTCGAGGTGGAGGGCAGT
GATGAGCAAAAAACCTTGTTCTACACCGCGCTGTACCACAGCCTTATTCATCCCAACATATTGCAGGATGCCAACGGCGA
TTACCCCTTGATGGGCCAGCAGGGCGTTGGCAACAGCAAGCAAAACCGCTACACGGTGTACTCGCTTTGGGATACCCACA
GAAACGTTCATCCCCTGCTGAGCCTGCTCTATCCCGAATTACAGGCCGATATGGTGCGCTCGGCAGTGGCCATGGCCAAA
GAGAGTGGCTGGCTGCCCAAGTGGGAGCTCTACGGCATGGAAACCCAGGTGATGGTGGGCGATCCCGCCACGGCCATGAT
TGCCGACAGCTACCTGCGCGGCATCCGGGATTTCGATGTCAATGCCGCCTATGGGGCCATGGTGCGGGCAGCAGAGCAGC
GCGAGCACAACCTGCTGCGGCCGGAAAACCCGGATTATCTGACGCTCGGCTATGTGCCAGTGGACGATGAAGGCCCCTAC
GATGGCAGCGTGGCCACCAGCCTGGAATACTACCTGGCCGACTTCAACCTGGCACAACTGGCATTGGCGCTGGGTAAGCA
GGAGGACCACGATAAGTACCTGGCCCGGGCACTGAACTACCGCACATTGTTTGATGCCGACACCGGCATGCTCAGGCCGA
AAAATAGAAAAGGCGAATGGCTGACACCCTTCGACCCCGAGCTTGGCCGTAACTTCGAGCCCGCCCCCGGCTATATCGAA
GGCAATGCCTGGAATTATCGCTTTTATGTGCCCCACGATACCCCCGGGCTGATACAGCTGCTCGGCGGGCCGGAAGCCTT
TTTACGCCAACTGGACGCCACCTTCGACACCGGTAACTTCGATATGGGCAACGAGCCCGATATCACTTATCCCTTCCTGT
ACAACTACCTGGAAGGTCAGAGCTGGCGCACCTCCCGGCGTGTCAGGGAGCTGATTGCGGCACACTTTGGCAATCATCCC
GGCGGCCTGCCCGGCAACGACGACACGGGCACCATGTCCACCTGGCTCGCGTTTTCCATGTTGGGCATTTACCCGGTGAG
CCCCGGCATGATGGACTACGCCCTGTTCCGCCCAAGCTTCAGCAAGGTGAAGATTCACCTCAGCGCCGAATACTATCCCG
GTAAGCAGTTTGTGATTGAAAACCCTGTCGGTGACCTTGACTCGGATAAGCCCGAAGCCTTCACACTAAACGGCCGCAGC
ATCGACAAACCCTTTGTGACCCATGAGGACATCATCAAGGGCGGCGTGCTCAAGGTGAAGTAG

Upstream 100 bases:

>100_bases
AGCAGGTCACCTTGAACGGCAAGCCCTTGAACGGATATATTTTACGACATTCAGATATTCTGGCCGGTGGTGAACTGGTC
TTTACCATGAGCCCTCAGCC

Downstream 100 bases:

>100_bases
CCCCATATAAAGACAAAAAAGCCGCCCGAGGGCGGCTTTTTTATTGTCAGCTTAATTCACTCTCGTCACTGTCAGACTGG
GTGCCTTGGGGTCCGGACCT

Product: putative alpha-1,2-mannosidase

Products: NA

Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein

Number of amino acids: Translated: 740; Mature: 740

Protein sequence:

>740_residues
MNKFLFGLLLTSCSALGGNSQYVNPFIGTSNFGATHPGAQYPNALASVSPFNVAHGGEQNKFEKDAAWNSRVYIHENRYL
TGFSHLNLSGVGCPDAGVLLLMPTTGPLELDAREYGSSYSNEQASPGYYSAQLNKYAVKAEVTSSLRTGLSRFTFPAGQS
NVLLNLGLGLTNETGASLKWVSEQEVEGSRMLGTFCYHDEDVRPVFFVARFSKAPKTFGVWKKMPRYQNVEADWIGYNDS
IKPYPGYRQLLSGDDIGAWLSFDTREQEAIEVKLGISFVSMENARENLDTEQPGFEFDKLRIEAQKAWDALLDRVEVEGS
DEQKTLFYTALYHSLIHPNILQDANGDYPLMGQQGVGNSKQNRYTVYSLWDTHRNVHPLLSLLYPELQADMVRSAVAMAK
ESGWLPKWELYGMETQVMVGDPATAMIADSYLRGIRDFDVNAAYGAMVRAAEQREHNLLRPENPDYLTLGYVPVDDEGPY
DGSVATSLEYYLADFNLAQLALALGKQEDHDKYLARALNYRTLFDADTGMLRPKNRKGEWLTPFDPELGRNFEPAPGYIE
GNAWNYRFYVPHDTPGLIQLLGGPEAFLRQLDATFDTGNFDMGNEPDITYPFLYNYLEGQSWRTSRRVRELIAAHFGNHP
GGLPGNDDTGTMSTWLAFSMLGIYPVSPGMMDYALFRPSFSKVKIHLSAEYYPGKQFVIENPVGDLDSDKPEAFTLNGRS
IDKPFVTHEDIIKGGVLKVK

Sequences:

>Translated_740_residues
MNKFLFGLLLTSCSALGGNSQYVNPFIGTSNFGATHPGAQYPNALASVSPFNVAHGGEQNKFEKDAAWNSRVYIHENRYL
TGFSHLNLSGVGCPDAGVLLLMPTTGPLELDAREYGSSYSNEQASPGYYSAQLNKYAVKAEVTSSLRTGLSRFTFPAGQS
NVLLNLGLGLTNETGASLKWVSEQEVEGSRMLGTFCYHDEDVRPVFFVARFSKAPKTFGVWKKMPRYQNVEADWIGYNDS
IKPYPGYRQLLSGDDIGAWLSFDTREQEAIEVKLGISFVSMENARENLDTEQPGFEFDKLRIEAQKAWDALLDRVEVEGS
DEQKTLFYTALYHSLIHPNILQDANGDYPLMGQQGVGNSKQNRYTVYSLWDTHRNVHPLLSLLYPELQADMVRSAVAMAK
ESGWLPKWELYGMETQVMVGDPATAMIADSYLRGIRDFDVNAAYGAMVRAAEQREHNLLRPENPDYLTLGYVPVDDEGPY
DGSVATSLEYYLADFNLAQLALALGKQEDHDKYLARALNYRTLFDADTGMLRPKNRKGEWLTPFDPELGRNFEPAPGYIE
GNAWNYRFYVPHDTPGLIQLLGGPEAFLRQLDATFDTGNFDMGNEPDITYPFLYNYLEGQSWRTSRRVRELIAAHFGNHP
GGLPGNDDTGTMSTWLAFSMLGIYPVSPGMMDYALFRPSFSKVKIHLSAEYYPGKQFVIENPVGDLDSDKPEAFTLNGRS
IDKPFVTHEDIIKGGVLKVK
>Mature_740_residues
MNKFLFGLLLTSCSALGGNSQYVNPFIGTSNFGATHPGAQYPNALASVSPFNVAHGGEQNKFEKDAAWNSRVYIHENRYL
TGFSHLNLSGVGCPDAGVLLLMPTTGPLELDAREYGSSYSNEQASPGYYSAQLNKYAVKAEVTSSLRTGLSRFTFPAGQS
NVLLNLGLGLTNETGASLKWVSEQEVEGSRMLGTFCYHDEDVRPVFFVARFSKAPKTFGVWKKMPRYQNVEADWIGYNDS
IKPYPGYRQLLSGDDIGAWLSFDTREQEAIEVKLGISFVSMENARENLDTEQPGFEFDKLRIEAQKAWDALLDRVEVEGS
DEQKTLFYTALYHSLIHPNILQDANGDYPLMGQQGVGNSKQNRYTVYSLWDTHRNVHPLLSLLYPELQADMVRSAVAMAK
ESGWLPKWELYGMETQVMVGDPATAMIADSYLRGIRDFDVNAAYGAMVRAAEQREHNLLRPENPDYLTLGYVPVDDEGPY
DGSVATSLEYYLADFNLAQLALALGKQEDHDKYLARALNYRTLFDADTGMLRPKNRKGEWLTPFDPELGRNFEPAPGYIE
GNAWNYRFYVPHDTPGLIQLLGGPEAFLRQLDATFDTGNFDMGNEPDITYPFLYNYLEGQSWRTSRRVRELIAAHFGNHP
GGLPGNDDTGTMSTWLAFSMLGIYPVSPGMMDYALFRPSFSKVKIHLSAEYYPGKQFVIENPVGDLDSDKPEAFTLNGRS
IDKPFVTHEDIIKGGVLKVK

Specific function: Unknown

COG id: COG3537

COG function: function code G; Putative alpha-1,2-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82774; Mature: 82774

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFLFGLLLTSCSALGGNSQYVNPFIGTSNFGATHPGAQYPNALASVSPFNVAHGGEQN
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
KFEKDAAWNSRVYIHENRYLTGFSHLNLSGVGCPDAGVLLLMPTTGPLELDAREYGSSYS
CCCCCCCCCCEEEEECCCEEEEECCCEECCCCCCCCCEEEEECCCCCCEECHHHHCCCCC
NEQASPGYYSAQLNKYAVKAEVTSSLRTGLSRFTFPAGQSNVLLNLGLGLTNETGASLKW
CCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEE
VSEQEVEGSRMLGTFCYHDEDVRPVFFVARFSKAPKTFGVWKKMPRYQNVEADWIGYNDS
CCHHHCCCCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCEEEECCCCC
IKPYPGYRQLLSGDDIGAWLSFDTREQEAIEVKLGISFVSMENARENLDTEQPGFEFDKL
CCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEEEEEEEEEHHHHHHCCCCCCCCCCHHHE
RIEAQKAWDALLDRVEVEGSDEQKTLFYTALYHSLIHPNILQDANGDYPLMGQQGVGNSK
EEEHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCC
QNRYTVYSLWDTHRNVHPLLSLLYPELQADMVRSAVAMAKESGWLPKWELYGMETQVMVG
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEC
DPATAMIADSYLRGIRDFDVNAAYGAMVRAAEQREHNLLRPENPDYLTLGYVPVDDEGPY
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCC
DGSVATSLEYYLADFNLAQLALALGKQEDHDKYLARALNYRTLFDADTGMLRPKNRKGEW
CCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCC
LTPFDPELGRNFEPAPGYIEGNAWNYRFYVPHDTPGLIQLLGGPEAFLRQLDATFDTGNF
CCCCCHHHCCCCCCCCCEEECCEEEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCCCC
DMGNEPDITYPFLYNYLEGQSWRTSRRVRELIAAHFGNHPGGLPGNDDTGTMSTWLAFSM
CCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
LGIYPVSPGMMDYALFRPSFSKVKIHLSAEYYPGKQFVIENPVGDLDSDKPEAFTLNGRS
HHCEECCCCHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCC
IDKPFVTHEDIIKGGVLKVK
CCCCCCCHHHHHCCCCEEEC
>Mature Secondary Structure
MNKFLFGLLLTSCSALGGNSQYVNPFIGTSNFGATHPGAQYPNALASVSPFNVAHGGEQN
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
KFEKDAAWNSRVYIHENRYLTGFSHLNLSGVGCPDAGVLLLMPTTGPLELDAREYGSSYS
CCCCCCCCCCEEEEECCCEEEEECCCEECCCCCCCCCEEEEECCCCCCEECHHHHCCCCC
NEQASPGYYSAQLNKYAVKAEVTSSLRTGLSRFTFPAGQSNVLLNLGLGLTNETGASLKW
CCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEE
VSEQEVEGSRMLGTFCYHDEDVRPVFFVARFSKAPKTFGVWKKMPRYQNVEADWIGYNDS
CCHHHCCCCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCEEEECCCCC
IKPYPGYRQLLSGDDIGAWLSFDTREQEAIEVKLGISFVSMENARENLDTEQPGFEFDKL
CCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEEEEEEEEEHHHHHHCCCCCCCCCCHHHE
RIEAQKAWDALLDRVEVEGSDEQKTLFYTALYHSLIHPNILQDANGDYPLMGQQGVGNSK
EEEHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCC
QNRYTVYSLWDTHRNVHPLLSLLYPELQADMVRSAVAMAKESGWLPKWELYGMETQVMVG
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEC
DPATAMIADSYLRGIRDFDVNAAYGAMVRAAEQREHNLLRPENPDYLTLGYVPVDDEGPY
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCC
DGSVATSLEYYLADFNLAQLALALGKQEDHDKYLARALNYRTLFDADTGMLRPKNRKGEW
CCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCC
LTPFDPELGRNFEPAPGYIEGNAWNYRFYVPHDTPGLIQLLGGPEAFLRQLDATFDTGNF
CCCCCHHHCCCCCCCCCEEECCEEEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCCCC
DMGNEPDITYPFLYNYLEGQSWRTSRRVRELIAAHFGNHPGGLPGNDDTGTMSTWLAFSM
CCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
LGIYPVSPGMMDYALFRPSFSKVKIHLSAEYYPGKQFVIENPVGDLDSDKPEAFTLNGRS
HHCEECCCCHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCC
IDKPFVTHEDIIKGGVLKVK
CCCCCCCHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA