| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718317
Identifier: 119718317
GI number: 119718317
Start: 4329606
End: 4330166
Strand: Reverse
Name: 119718317
Synonym: Noca_4098
Alternate gene names: NA
Gene position: 4330166-4329606 (Counterclockwise)
Preceding gene: 119718319
Following gene: 119718314
Centisome position: 86.85
GC content: 75.4
Gene sequence:
>561_bases ATGGCCGTACGACTCGATGACGTGAAGGACTGGATCGAGGTGGCGATCCCCGGGGCGGAGCCGCCCGTGCGGCTGAGCCG GCTGCACTCCGGGGCGGACGGAGCGTCGGTGTCGCTCGTGCGGTTCCCGCCGGGCTGGTCGCGCCCCGTCGTGGGTCACT ATGCGGCTGCGGAGGAGTTCGTCGTGCTCCACGGGAGCATCGTCGTGGGCGACCGGTTCGGAGAAGGCGACTACGCCTAC CTGCCGCCGCGGACGCTGCGCGCCGAGAGCTCCAGCGAGACCGGCGCGCTGGTCCTGGCCTGGTTCTCCGCCGCGCCGGT GTGGCACCGCGGCCGCCCCGCGGAGCGGTCGCCGCAACTGCCGGTGCACCGGCAGGGTGCCGGCGTGCTGCGCCAGGCGG CGCCGGAGGTCCCCGGTGCGTACGAGATCGGCGCGCCGCACCCTGCCGGCGGTCTCGGTGCCGACGTGCTCGACCCAGCT GCGCGGCTCTGGGAATGGGTGCCGGCCGGCCGGGCGCCGACGCTCGACGCGGCGATCGTGCACCTGCGCACCTGGGCCTG A
Upstream 100 bases:
>100_bases TGTGCGGAACGGTATTCCAGAATAGCCGAATGTGGTCGGGTGAGGCACCTCTTCGCGCCGGCGCCGATCGCAAGGGACGA GCGTGGAGGAGAGGTCTCGG
Downstream 100 bases:
>100_bases CCCGCCCGCGCCGCGGGGCCGGACTCGCGGCTACCCGGCCAGTGTGCCGGGCTTGACCACGCCGAGGAATGCGGCGAGGG CCACGAAGAACCAGATCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MAVRLDDVKDWIEVAIPGAEPPVRLSRLHSGADGASVSLVRFPPGWSRPVVGHYAAAEEFVVLHGSIVVGDRFGEGDYAY LPPRTLRAESSSETGALVLAWFSAAPVWHRGRPAERSPQLPVHRQGAGVLRQAAPEVPGAYEIGAPHPAGGLGADVLDPA ARLWEWVPAGRAPTLDAAIVHLRTWA
Sequences:
>Translated_186_residues MAVRLDDVKDWIEVAIPGAEPPVRLSRLHSGADGASVSLVRFPPGWSRPVVGHYAAAEEFVVLHGSIVVGDRFGEGDYAY LPPRTLRAESSSETGALVLAWFSAAPVWHRGRPAERSPQLPVHRQGAGVLRQAAPEVPGAYEIGAPHPAGGLGADVLDPA ARLWEWVPAGRAPTLDAAIVHLRTWA >Mature_185_residues AVRLDDVKDWIEVAIPGAEPPVRLSRLHSGADGASVSLVRFPPGWSRPVVGHYAAAEEFVVLHGSIVVGDRFGEGDYAYL PPRTLRAESSSETGALVLAWFSAAPVWHRGRPAERSPQLPVHRQGAGVLRQAAPEVPGAYEIGAPHPAGGLGADVLDPAA RLWEWVPAGRAPTLDAAIVHLRTWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19834; Mature: 19702
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRLDDVKDWIEVAIPGAEPPVRLSRLHSGADGASVSLVRFPPGWSRPVVGHYAAAEEF CCEEHHHHHHHHHEECCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHCCCEE VVLHGSIVVGDRFGEGDYAYLPPRTLRAESSSETGALVLAWFSAAPVWHRGRPAERSPQL EEEECEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC PVHRQGAGVLRQAAPEVPGAYEIGAPHPAGGLGADVLDPAARLWEWVPAGRAPTLDAAIV CCCCCCCHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEE HLRTWA EEEECC >Mature Secondary Structure AVRLDDVKDWIEVAIPGAEPPVRLSRLHSGADGASVSLVRFPPGWSRPVVGHYAAAEEF CEEHHHHHHHHHEECCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHCCCEE VVLHGSIVVGDRFGEGDYAYLPPRTLRAESSSETGALVLAWFSAAPVWHRGRPAERSPQL EEEECEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC PVHRQGAGVLRQAAPEVPGAYEIGAPHPAGGLGADVLDPAARLWEWVPAGRAPTLDAAIV CCCCCCCHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEE HLRTWA EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA