Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718277

Identifier: 119718277

GI number: 119718277

Start: 4282593

End: 4283147

Strand: Reverse

Name: 119718277

Synonym: Noca_4058

Alternate gene names: NA

Gene position: 4283147-4282593 (Counterclockwise)

Preceding gene: 119718278

Following gene: 119718276

Centisome position: 85.91

GC content: 74.05

Gene sequence:

>555_bases
ATGCAGCTTCATCGTCCAGGGTCGAGCTTTGTCGGCCGGCCGACGAAACTCGCGCGCCGCCCACCGGGCTACCGTGGGCC
CATGCCCAGGATCGCCACCACCGACCGGGTCGGGCTCGACCGGCTGCTCGACTTCGTCCGGACCCGCCACCACTTGGTGC
TGGTCACCACCCGCGCGAACGGCCGCCCGCAGCTCTCGCCCGTCGCCGGCGGCGTGGACGCGGACGGGCGGATCGTGGTG
TCGACGTACCCCGACCGCGCGAAGGCGGTGAACCTGCGCCGCAACCCGGCGGCCACGGTGCTGGTGCTCTCCGACGAGTG
GGACGACGCGTGGGTCCAGGTCGACGGCACCGCCGAGGTCCTCGACATGCCGTCCCCGGAGGCCGAGGACGGGCTGGTCG
AGTACTACCGCTGCATCGCCGGCGAGCACCCCGACTGGGCGGAGTACCGCGCCGCGATGCGCCGCCAGGCCAAGTCGCTG
ATCCGGATCCGGGTCGACTCCTGGGGCCCGATCGCCACCGGCGGGTTCCCGCCGGACCGCGCCCCCGCGGGCTGA

Upstream 100 bases:

>100_bases
GCCGGCTCGGACCGGGCGAGCTCCGCGCCGGTGGTGCCCCGGGGCTGAGGGCGGGCCCGTCCAGTTTCATCGGCCGGCCG
ATGAAACCCGTGCCTGGACG

Downstream 100 bases:

>100_bases
GCGCGGCCCCCGTCCAGTTTCATCGGCCGGCCGATGAAGCTCGCGCGCTTCCCACCGGTCCAGTCGGGCGGTCCAGTCCG
GCCGTGGCGGCGCGCTCGGC

Product: pyridoxamine 5'-phosphate oxidase-like protein

Products: NA

Alternate protein names: PNP/PMP oxidase; PNPOx; Pyridoxal 5'-phosphate synthase [H]

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MQLHRPGSSFVGRPTKLARRPPGYRGPMPRIATTDRVGLDRLLDFVRTRHHLVLVTTRANGRPQLSPVAGGVDADGRIVV
STYPDRAKAVNLRRNPAATVLVLSDEWDDAWVQVDGTAEVLDMPSPEAEDGLVEYYRCIAGEHPDWAEYRAAMRRQAKSL
IRIRVDSWGPIATGGFPPDRAPAG

Sequences:

>Translated_184_residues
MQLHRPGSSFVGRPTKLARRPPGYRGPMPRIATTDRVGLDRLLDFVRTRHHLVLVTTRANGRPQLSPVAGGVDADGRIVV
STYPDRAKAVNLRRNPAATVLVLSDEWDDAWVQVDGTAEVLDMPSPEAEDGLVEYYRCIAGEHPDWAEYRAAMRRQAKSL
IRIRVDSWGPIATGGFPPDRAPAG
>Mature_184_residues
MQLHRPGSSFVGRPTKLARRPPGYRGPMPRIATTDRVGLDRLLDFVRTRHHLVLVTTRANGRPQLSPVAGGVDADGRIVV
STYPDRAKAVNLRRNPAATVLVLSDEWDDAWVQVDGTAEVLDMPSPEAEDGLVEYYRCIAGEHPDWAEYRAAMRRQAKSL
IRIRVDSWGPIATGGFPPDRAPAG

Specific function: Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019920
- InterPro:   IPR011576
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01243 Pyridox_oxidase [H]

EC number: =1.4.3.5 [H]

Molecular weight: Translated: 20300; Mature: 20300

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLHRPGSSFVGRPTKLARRPPGYRGPMPRIATTDRVGLDRLLDFVRTRHHLVLVTTRAN
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCC
GRPQLSPVAGGVDADGRIVVSTYPDRAKAVNLRRNPAATVLVLSDEWDDAWVQVDGTAEV
CCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCEEEEEEECCCCCEEEEECCCEEE
LDMPSPEAEDGLVEYYRCIAGEHPDWAEYRAAMRRQAKSLIRIRVDSWGPIATGGFPPDR
EECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC
APAG
CCCC
>Mature Secondary Structure
MQLHRPGSSFVGRPTKLARRPPGYRGPMPRIATTDRVGLDRLLDFVRTRHHLVLVTTRAN
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCC
GRPQLSPVAGGVDADGRIVVSTYPDRAKAVNLRRNPAATVLVLSDEWDDAWVQVDGTAEV
CCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCEEEEEEECCCCCEEEEECCCEEE
LDMPSPEAEDGLVEYYRCIAGEHPDWAEYRAAMRRQAKSLIRIRVDSWGPIATGGFPPDR
EECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC
APAG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]