Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718278

Identifier: 119718278

GI number: 119718278

Start: 4283200

End: 4284963

Strand: Reverse

Name: 119718278

Synonym: Noca_4059

Alternate gene names: NA

Gene position: 4284963-4283200 (Counterclockwise)

Preceding gene: 119718281

Following gene: 119718277

Centisome position: 85.94

GC content: 76.53

Gene sequence:

>1764_bases
GTGGTCGTCGGCGGCCTGGTCGCGCTGCCCGCCGGGCCCGCGGCCGCCGTCAGCACCGGCCGGCCGATCGCGGTCGCCGC
GGCCGACGACGGGACGTCGTACGTCGGCTATGCCGCCGGCCACCGGCTGCTCCGGCTCGACGCCGCCGGCGGGGTGGCCG
GCTCGGTGCCGCTGGACCAGGACGCGCCCGTCACGGCCCTCGACGTGGGGCCCGACGGCAACGTCTGGGTCCACTACGGC
GCCAGCGTGAGCGAGCTCGCGCCCGACGGCGCCGTCCGCACCCACTTCCCGGTCGCCGGCGGGGCGTGCCCGGTCGACCG
GGCGCACGACCCGGCGCGGTACGGCGGCCTCGAGGTGACCCGGGACGCGGTGTACGTCGCCGGTCGCTGTGCCGCCACGG
TCGGCATCTACCGCCCCGACGGCGAGCTGCTGGCGAGCGTCGACCTGCCGGGGCGGGCCTACCCGGGCGACGTCGTCCTC
GCCCCGGCGGCCAAGTCCCTGCCCGCGCGGATGTACGTGTCGGTGCCGGACGCCGGCCGGGTCTACGCCTACAACACCGC
GAGCCTGCGCGCGGACCCGAAGCCCGCGCGGACGCTGGCGATCAAGCGGTTCTTCGGCTATCGCTCGCCCGCACCCGGGC
CGCTGGCCGCCGACGAGAAGGGCCAGCTCGCCGTCGTGGACGTCGCCAACAACGCGGTGCACTTCTACAACGGCCCCGAG
GACTACTGGTACTACCGCACCCTCGGCCACCCGCCCGACCCGGCGTCCGACCGCGGGTTCCTCGATCAGCCGACCGCGTT
CGACAACGCGGACGGCAGCTTCCGCGACGGCTTCTGGGTCGCCGACACCGGCAACGGGCGGGTGCAGCACTGGGACCACC
TCGGCACCACCGACTGGATGGCCGACGCGCTGCCGCCGGGCGACCCCGGCGCCCCGGTCAACGTCGGGCTGCCGCGGATC
ACCGGATCGCCGTACGCCGGGCGGGTGCTCGACTGCGAGCCCGGGACGTGGGACGGCGCGGTGGCGTCGTACCGGCTGGC
GTGGCTGCGCGACGGGCTGCCGGTCCCCGGCGCCGACGGCGCCACGTACACCGTCACCTCCCGTGACGTGGCGACCGCGC
TGACCTGCACCGTGACCGCCGTGGCCGCGGACGGCGCGAGCTCGGCGCCGAGCGCCAGCGAGGTGTTCGCGATCCCCGGC
CCGCACTCGCCGCCCTACGTCCTGGACCGTCCGGTGATCAGCGGCCAGCCCACCTCCGGTGCCATCCTGCGGTGCGGCAA
CGGGACCTGGACCGGGCGACCCACGTCGTACCTCCGCGGCTGGCTGCGCGACGGCCAGCTCCTGCCCGGCACGAACGCCC
CGGAGTACCTCGTCACCGACAACGACCGCTACCACGAGCTGACCTGCCGGGTCGCCGCGGTGAACCGGAACGGCGCCGGC
AAGGTCGCGCTCAGCGACCCGGTCGCCGTCGACGACGGCAGCAGTGGTGGCCACGTCGGCCCGCCGGTGAGCACCGCGCG
GCCGCGGATCGTCGGCCGGGCCAAGGTCGGGGCGGTGCTGTACTGCGACCCCGGGCGGTGGCGCAACGCGCCGGTGCTCA
CCTACGTGTGGCGCCGCGACGGCGCCGCGCTCGGCGGCTCGGAGAAGGACCGCTACGAGGTGCTCGGCGACGACCGCGGG
CACCGGCTGACCTGCCTGGTCACCGGCACCAACCCGGCCGGCTCGGACCGGGCGAGCTCCGCGCCGGTGGTGCCCCGGGG
CTGA

Upstream 100 bases:

>100_bases
AGTCTACCGATTTCGGCCCCTCCGACCCGCATCGACAACTAGCCTCGGACCCGTGGGGGGAGCGCTGCGTGCTGCGCTGA
CTGGGGGGCTCGCGACGACG

Downstream 100 bases:

>100_bases
GGGCGGGCCCGTCCAGTTTCATCGGCCGGCCGATGAAACCCGTGCCTGGACGATGCAGCTTCATCGTCCAGGGTCGAGCT
TTGTCGGCCGGCCGACGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MVVGGLVALPAGPAAAVSTGRPIAVAAADDGTSYVGYAAGHRLLRLDAAGGVAGSVPLDQDAPVTALDVGPDGNVWVHYG
ASVSELAPDGAVRTHFPVAGGACPVDRAHDPARYGGLEVTRDAVYVAGRCAATVGIYRPDGELLASVDLPGRAYPGDVVL
APAAKSLPARMYVSVPDAGRVYAYNTASLRADPKPARTLAIKRFFGYRSPAPGPLAADEKGQLAVVDVANNAVHFYNGPE
DYWYYRTLGHPPDPASDRGFLDQPTAFDNADGSFRDGFWVADTGNGRVQHWDHLGTTDWMADALPPGDPGAPVNVGLPRI
TGSPYAGRVLDCEPGTWDGAVASYRLAWLRDGLPVPGADGATYTVTSRDVATALTCTVTAVAADGASSAPSASEVFAIPG
PHSPPYVLDRPVISGQPTSGAILRCGNGTWTGRPTSYLRGWLRDGQLLPGTNAPEYLVTDNDRYHELTCRVAAVNRNGAG
KVALSDPVAVDDGSSGGHVGPPVSTARPRIVGRAKVGAVLYCDPGRWRNAPVLTYVWRRDGAALGGSEKDRYEVLGDDRG
HRLTCLVTGTNPAGSDRASSAPVVPRG

Sequences:

>Translated_587_residues
MVVGGLVALPAGPAAAVSTGRPIAVAAADDGTSYVGYAAGHRLLRLDAAGGVAGSVPLDQDAPVTALDVGPDGNVWVHYG
ASVSELAPDGAVRTHFPVAGGACPVDRAHDPARYGGLEVTRDAVYVAGRCAATVGIYRPDGELLASVDLPGRAYPGDVVL
APAAKSLPARMYVSVPDAGRVYAYNTASLRADPKPARTLAIKRFFGYRSPAPGPLAADEKGQLAVVDVANNAVHFYNGPE
DYWYYRTLGHPPDPASDRGFLDQPTAFDNADGSFRDGFWVADTGNGRVQHWDHLGTTDWMADALPPGDPGAPVNVGLPRI
TGSPYAGRVLDCEPGTWDGAVASYRLAWLRDGLPVPGADGATYTVTSRDVATALTCTVTAVAADGASSAPSASEVFAIPG
PHSPPYVLDRPVISGQPTSGAILRCGNGTWTGRPTSYLRGWLRDGQLLPGTNAPEYLVTDNDRYHELTCRVAAVNRNGAG
KVALSDPVAVDDGSSGGHVGPPVSTARPRIVGRAKVGAVLYCDPGRWRNAPVLTYVWRRDGAALGGSEKDRYEVLGDDRG
HRLTCLVTGTNPAGSDRASSAPVVPRG
>Mature_587_residues
MVVGGLVALPAGPAAAVSTGRPIAVAAADDGTSYVGYAAGHRLLRLDAAGGVAGSVPLDQDAPVTALDVGPDGNVWVHYG
ASVSELAPDGAVRTHFPVAGGACPVDRAHDPARYGGLEVTRDAVYVAGRCAATVGIYRPDGELLASVDLPGRAYPGDVVL
APAAKSLPARMYVSVPDAGRVYAYNTASLRADPKPARTLAIKRFFGYRSPAPGPLAADEKGQLAVVDVANNAVHFYNGPE
DYWYYRTLGHPPDPASDRGFLDQPTAFDNADGSFRDGFWVADTGNGRVQHWDHLGTTDWMADALPPGDPGAPVNVGLPRI
TGSPYAGRVLDCEPGTWDGAVASYRLAWLRDGLPVPGADGATYTVTSRDVATALTCTVTAVAADGASSAPSASEVFAIPG
PHSPPYVLDRPVISGQPTSGAILRCGNGTWTGRPTSYLRGWLRDGQLLPGTNAPEYLVTDNDRYHELTCRVAAVNRNGAG
KVALSDPVAVDDGSSGGHVGPPVSTARPRIVGRAKVGAVLYCDPGRWRNAPVLTYVWRRDGAALGGSEKDRYEVLGDDRG
HRLTCLVTGTNPAGSDRASSAPVVPRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61007; Mature: 61007

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVGGLVALPAGPAAAVSTGRPIAVAAADDGTSYVGYAAGHRLLRLDAAGGVAGSVPLDQ
CEECEEEEECCCCHHHHCCCCCEEEEECCCCCCEEEECCCCEEEEEECCCCCCCCCCCCC
DAPVTALDVGPDGNVWVHYGASVSELAPDGAVRTHFPVAGGACPVDRAHDPARYGGLEVT
CCCEEEEEECCCCCEEEEECCCHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHCCEEEE
RDAVYVAGRCAATVGIYRPDGELLASVDLPGRAYPGDVVLAPAAKSLPARMYVSVPDAGR
CCEEEEECEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEEEECCCCCE
VYAYNTASLRADPKPARTLAIKRFFGYRSPAPGPLAADEKGQLAVVDVANNAVHFYNGPE
EEEEECCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCC
DYWYYRTLGHPPDPASDRGFLDQPTAFDNADGSFRDGFWVADTGNGRVQHWDHLGTTDWM
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCHHHH
ADALPPGDPGAPVNVGLPRITGSPYAGRVLDCEPGTWDGAVASYRLAWLRDGLPVPGADG
HHCCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCHHHHEEEEHHHCCCCCCCCCC
ATYTVTSRDVATALTCTVTAVAADGASSAPSASEVFAIPGPHSPPYVLDRPVISGQPTSG
CEEEEECCCHHEEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEECCEECCCCCCC
AILRCGNGTWTGRPTSYLRGWLRDGQLLPGTNAPEYLVTDNDRYHELTCRVAAVNRNGAG
CEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCC
KVALSDPVAVDDGSSGGHVGPPVSTARPRIVGRAKVGAVLYCDPGRWRNAPVLTYVWRRD
EEEECCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEECC
GAALGGSEKDRYEVLGDDRGHRLTCLVTGTNPAGSDRASSAPVVPRG
CCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVVGGLVALPAGPAAAVSTGRPIAVAAADDGTSYVGYAAGHRLLRLDAAGGVAGSVPLDQ
CEECEEEEECCCCHHHHCCCCCEEEEECCCCCCEEEECCCCEEEEEECCCCCCCCCCCCC
DAPVTALDVGPDGNVWVHYGASVSELAPDGAVRTHFPVAGGACPVDRAHDPARYGGLEVT
CCCEEEEEECCCCCEEEEECCCHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHCCEEEE
RDAVYVAGRCAATVGIYRPDGELLASVDLPGRAYPGDVVLAPAAKSLPARMYVSVPDAGR
CCEEEEECEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEEEECCCCCE
VYAYNTASLRADPKPARTLAIKRFFGYRSPAPGPLAADEKGQLAVVDVANNAVHFYNGPE
EEEEECCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCC
DYWYYRTLGHPPDPASDRGFLDQPTAFDNADGSFRDGFWVADTGNGRVQHWDHLGTTDWM
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCHHHH
ADALPPGDPGAPVNVGLPRITGSPYAGRVLDCEPGTWDGAVASYRLAWLRDGLPVPGADG
HHCCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCHHHHEEEEHHHCCCCCCCCCC
ATYTVTSRDVATALTCTVTAVAADGASSAPSASEVFAIPGPHSPPYVLDRPVISGQPTSG
CEEEEECCCHHEEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEECCEECCCCCCC
AILRCGNGTWTGRPTSYLRGWLRDGQLLPGTNAPEYLVTDNDRYHELTCRVAAVNRNGAG
CEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCC
KVALSDPVAVDDGSSGGHVGPPVSTARPRIVGRAKVGAVLYCDPGRWRNAPVLTYVWRRD
EEEECCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEECC
GAALGGSEKDRYEVLGDDRGHRLTCLVTGTNPAGSDRASSAPVVPRG
CCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA