| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718276
Identifier: 119718276
GI number: 119718276
Start: 4279731
End: 4282463
Strand: Reverse
Name: 119718276
Synonym: Noca_4057
Alternate gene names: NA
Gene position: 4282463-4279731 (Counterclockwise)
Preceding gene: 119718277
Following gene: 119718275
Centisome position: 85.89
GC content: 73.55
Gene sequence:
>2733_bases GTGCGCGGCTTCGCCCCCCTGGGCCGCTTCCTCGGCCTGGCCATGGTCGTCGCGGGGCTCGGGACCGCTACTTTGGCGAC CGCCGAGACCGCGCACGCGGCCAGTGCGGACGGCCCGACGGCGATCGGGGTGAGCTCCAACGGCACGACGTACGTCGGGT TCGCCAGCGGCGGCGAGCTGCGGCGGATCTCGGTGTCCGGCAAGCCCAAGCCGTCGATCTCCCTCGACCAGGACGAGGCC GTCGACGGCATCTTCGTGACCGCAGGCGACGACATCTGGGTCGACTACGAGACCGGCATGTCGCTGTTCAACGCTGCCGG CCGACTGATCGTCCACTACGACCACGAGCCGGCACGCTCCTGCGACAACAGCTCGCCCGCGCACCGGTACGGCGGGATCA CCGCCAACGGCAACCGGATCTACGTCGCCAACCGCTGCGACGACAGCGTCTCGGTGTACGCCCGCAACGGCGACCTCCAG GCGACCGTCGACCTGCCCGGCAACGACCACCCCCGGGGCATCGCGTACGGCGGGCCGCAGGCCGGCCGCCCGGCCACGCT GTACGTCGCGATCCCGGACCGCGGCCAGATCCTGTCCTACGAGGCCGCCGGCCTGCGCAGCTCCTCGAAGCCGTCGCGGA CCTTCACGATCCGGCGTCCCGGCGGCGGCAACAGGCCGCAGCCGGCCGGCGTCGCGGTGGACAAGTGGGGCCAGCTGACC GTCTCCGACATGGCGAACAACGCGCTGTACCTGTTCGACACCAACCACGACTTCTCGCTCTACCGGACCCTCGGCCACCC GCCGCGGGCCAGCCGGGCGGCCGGGCGGCTCAGCTACCCCGCCGCCATCGCGCAGCACGCCCAGGACGGCGGATCGCTCT CGGGCGACCTGTTCATCGCGGACACCGACAACGACCGGGCCCAGCGGTGGAACACCAGCGGCTACACCTACTGGGCGAAG GGCGTCCGGCCCGGCTCCGGTGGCGGCGGCGGTGGCGGTGGTGGCTCCGGCGGCTCCGGCGGCGGCGGTGGTGGTGGCGG CGGTGGCGGCGGCGGAACGACCACCCCGCCCACCAACCTCTCCCCGCCCCAGCTCAGCGGACCGCCCGAGGTCGGCTTCC AGCTGACCTGCTTCACCGGTTCGTGGTCGGGCAGCCCACAGGCCTTCGAGCGGAACTGGCTGCGCGACGGCGCGCCGATC GCCGGCGCCACCGGGGCGACGTACCTGCTCACGGCCGCCGACGCCGGGACCCAGATCTCCTGCCGGGTCCGGGCGGACAG CGAGGCCGGCACGAGTGAGTGGGTGACCACCGCGACGGTGACCATCGGCGGGTCGGGCCCGGTCGCCACGGCTCCGGTGA ACACGGTGCCGCCGGCGATCTCCGGTACGGCGGCCGTCGGGCAGACGCTGTCGTGCTCGCAGGGCACCTGGTCGGGGAGC CCGACCGGCTACGGTTACCAGTGGCGGCGCGACGGAGGGGCGATCTCGGGGGCGACCGGCACGACGTACGTCGTGACCGC CACGGACAGCGGCCGGGCGTTGACCTGCACGGTGACGGCGTCGAACAGCTCCGGGAGCACGCCGCAGACCTCGGCGCCGG TGACGGTGGCCGCGGCGGCCGGCCCGGTGAACACGGTGCCGCCGGCGATCTCCGGCACGGCGGTGGTGGGGCAGACGCTG TCGTGCTCGCTGGGCACCTGGTCGGGGAGCCCGACCGGCTACGGCTACCAGTGGCGGCGTGATGGTGCGGCGATCTCGGG GGCGACCGGCACGACGTACGTCGTGACCGCCACGGACAGTGGCCGGGCGCTGACCTGCACGGTGACGGCGTCGAACAGCT CCGGGAGCACGCCGCAGACCTCGGCGCCGGTGACGGTGACAGCCGACAGCCCGGTGAACACGGTGCCGCCGATCGTGTCC GGCTCGGCCAACATCGGCGAGGCGCTCACCTGCCTGCCCGGGGCGTGGTCCGGCAGCGGGGTGAGCTACGAGTACGCGTG GAAGCGCAACAACGTCGCGATCCCGCTGGCGACCTGGTCGTCGTACACGATCCTCTCCGAGGACGTCGGCGCCTCGCTGA CCTGCACGGTGACCGCGAGCAACGGCCAGGGCACCGCCCAGGCGACCTCGGCCGGCTTCGGGATCGGCGGCCCGTCGGGC CACGCACCCAGCAACGTCACCCCGCCGTCCTTGTCCGGTACGGCGGCGCCGGGTGAGACCCTCACCTGCGACCCGGGCGC CTGGGTCGGCATCCCCGAGCTCGTCACCACGTACTCCTGGCAGCGCAGCGGCCGGGCCCTGGCCGGCGCCACGGCCGCGA CGTACGACGTGGTGGCCGCCGACGCCGGCAGCAGCCTGCGCTGCGTCGTCGTGGTCGCGAACGGCTACGGCAAGGCGGCG GTCGCCTCGCCCGGGGTGGCGGTGAGTGGGGGTGGAGGCACGGCGTCCTGCCTGGGGCAGATCGGCGTCACCGTGAACGA CGGCGCCACCCGGGTGACCACGGCGGACGTCGTCCTCGGCATCGTCGCGCCCAGCGGCGTCACGTCGGTGACGATCTCGA ACGACTTCGACTTCGCCACTGCGGTGACCATGCCGGTCACGCCGTCGTGCACGTATGCGTGGACGCTGCGCTCGACGCCG GGGGTCGCGGCGATGTCCTCGGTGTTCGTGCGGTTCGGGTCCAGCCCGATGATCTACGGCTACAGCATCCTGGTGGACCG GACCGGCGGGTGA
Upstream 100 bases:
>100_bases GCCGATGAAGCTCGCGCGCTTCCCACCGGTCCAGTCGGGCGGTCCAGTCCGGCCGTGGCGGCGCGCTCGGCGCGGGCCCG ACCCGGTTTAGGGTCGAGCC
Downstream 100 bases:
>100_bases CACGCTGGCGGGATGAGCTGCCGCTTCGTGCCGCCGTACCTGCTGCGCCGGGTCGCGCCCGAGAGCCTGCTGGTCGACGA GCGGCTGCGGAGCGGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 910; Mature: 910
Protein sequence:
>910_residues MRGFAPLGRFLGLAMVVAGLGTATLATAETAHAASADGPTAIGVSSNGTTYVGFASGGELRRISVSGKPKPSISLDQDEA VDGIFVTAGDDIWVDYETGMSLFNAAGRLIVHYDHEPARSCDNSSPAHRYGGITANGNRIYVANRCDDSVSVYARNGDLQ ATVDLPGNDHPRGIAYGGPQAGRPATLYVAIPDRGQILSYEAAGLRSSSKPSRTFTIRRPGGGNRPQPAGVAVDKWGQLT VSDMANNALYLFDTNHDFSLYRTLGHPPRASRAAGRLSYPAAIAQHAQDGGSLSGDLFIADTDNDRAQRWNTSGYTYWAK GVRPGSGGGGGGGGGSGGSGGGGGGGGGGGGGTTTPPTNLSPPQLSGPPEVGFQLTCFTGSWSGSPQAFERNWLRDGAPI AGATGATYLLTAADAGTQISCRVRADSEAGTSEWVTTATVTIGGSGPVATAPVNTVPPAISGTAAVGQTLSCSQGTWSGS PTGYGYQWRRDGGAISGATGTTYVVTATDSGRALTCTVTASNSSGSTPQTSAPVTVAAAAGPVNTVPPAISGTAVVGQTL SCSLGTWSGSPTGYGYQWRRDGAAISGATGTTYVVTATDSGRALTCTVTASNSSGSTPQTSAPVTVTADSPVNTVPPIVS GSANIGEALTCLPGAWSGSGVSYEYAWKRNNVAIPLATWSSYTILSEDVGASLTCTVTASNGQGTAQATSAGFGIGGPSG HAPSNVTPPSLSGTAAPGETLTCDPGAWVGIPELVTTYSWQRSGRALAGATAATYDVVAADAGSSLRCVVVVANGYGKAA VASPGVAVSGGGGTASCLGQIGVTVNDGATRVTTADVVLGIVAPSGVTSVTISNDFDFATAVTMPVTPSCTYAWTLRSTP GVAAMSSVFVRFGSSPMIYGYSILVDRTGG
Sequences:
>Translated_910_residues MRGFAPLGRFLGLAMVVAGLGTATLATAETAHAASADGPTAIGVSSNGTTYVGFASGGELRRISVSGKPKPSISLDQDEA VDGIFVTAGDDIWVDYETGMSLFNAAGRLIVHYDHEPARSCDNSSPAHRYGGITANGNRIYVANRCDDSVSVYARNGDLQ ATVDLPGNDHPRGIAYGGPQAGRPATLYVAIPDRGQILSYEAAGLRSSSKPSRTFTIRRPGGGNRPQPAGVAVDKWGQLT VSDMANNALYLFDTNHDFSLYRTLGHPPRASRAAGRLSYPAAIAQHAQDGGSLSGDLFIADTDNDRAQRWNTSGYTYWAK GVRPGSGGGGGGGGGSGGSGGGGGGGGGGGGGTTTPPTNLSPPQLSGPPEVGFQLTCFTGSWSGSPQAFERNWLRDGAPI AGATGATYLLTAADAGTQISCRVRADSEAGTSEWVTTATVTIGGSGPVATAPVNTVPPAISGTAAVGQTLSCSQGTWSGS PTGYGYQWRRDGGAISGATGTTYVVTATDSGRALTCTVTASNSSGSTPQTSAPVTVAAAAGPVNTVPPAISGTAVVGQTL SCSLGTWSGSPTGYGYQWRRDGAAISGATGTTYVVTATDSGRALTCTVTASNSSGSTPQTSAPVTVTADSPVNTVPPIVS GSANIGEALTCLPGAWSGSGVSYEYAWKRNNVAIPLATWSSYTILSEDVGASLTCTVTASNGQGTAQATSAGFGIGGPSG HAPSNVTPPSLSGTAAPGETLTCDPGAWVGIPELVTTYSWQRSGRALAGATAATYDVVAADAGSSLRCVVVVANGYGKAA VASPGVAVSGGGGTASCLGQIGVTVNDGATRVTTADVVLGIVAPSGVTSVTISNDFDFATAVTMPVTPSCTYAWTLRSTP GVAAMSSVFVRFGSSPMIYGYSILVDRTGG >Mature_910_residues MRGFAPLGRFLGLAMVVAGLGTATLATAETAHAASADGPTAIGVSSNGTTYVGFASGGELRRISVSGKPKPSISLDQDEA VDGIFVTAGDDIWVDYETGMSLFNAAGRLIVHYDHEPARSCDNSSPAHRYGGITANGNRIYVANRCDDSVSVYARNGDLQ ATVDLPGNDHPRGIAYGGPQAGRPATLYVAIPDRGQILSYEAAGLRSSSKPSRTFTIRRPGGGNRPQPAGVAVDKWGQLT VSDMANNALYLFDTNHDFSLYRTLGHPPRASRAAGRLSYPAAIAQHAQDGGSLSGDLFIADTDNDRAQRWNTSGYTYWAK GVRPGSGGGGGGGGGSGGSGGGGGGGGGGGGGTTTPPTNLSPPQLSGPPEVGFQLTCFTGSWSGSPQAFERNWLRDGAPI AGATGATYLLTAADAGTQISCRVRADSEAGTSEWVTTATVTIGGSGPVATAPVNTVPPAISGTAAVGQTLSCSQGTWSGS PTGYGYQWRRDGGAISGATGTTYVVTATDSGRALTCTVTASNSSGSTPQTSAPVTVAAAAGPVNTVPPAISGTAVVGQTL SCSLGTWSGSPTGYGYQWRRDGAAISGATGTTYVVTATDSGRALTCTVTASNSSGSTPQTSAPVTVTADSPVNTVPPIVS GSANIGEALTCLPGAWSGSGVSYEYAWKRNNVAIPLATWSSYTILSEDVGASLTCTVTASNGQGTAQATSAGFGIGGPSG HAPSNVTPPSLSGTAAPGETLTCDPGAWVGIPELVTTYSWQRSGRALAGATAATYDVVAADAGSSLRCVVVVANGYGKAA VASPGVAVSGGGGTASCLGQIGVTVNDGATRVTTADVVLGIVAPSGVTSVTISNDFDFATAVTMPVTPSCTYAWTLRSTP GVAAMSSVFVRFGSSPMIYGYSILVDRTGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91013; Mature: 91013
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS50835 IG_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGFAPLGRFLGLAMVVAGLGTATLATAETAHAASADGPTAIGVSSNGTTYVGFASGGEL CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCE RRISVSGKPKPSISLDQDEAVDGIFVTAGDDIWVDYETGMSLFNAAGRLIVHYDHEPARS EEEEECCCCCCCEECCCCCCCCEEEEEECCCEEEEHHHCHHHHHCCCEEEEEECCCHHHH CDNSSPAHRYGGITANGNRIYVANRCDDSVSVYARNGDLQATVDLPGNDHPRGIAYGGPQ CCCCCCHHHHCCEEECCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCEEECCCC AGRPATLYVAIPDRGQILSYEAAGLRSSSKPSRTFTIRRPGGGNRPQPAGVAVDKWGQLT CCCCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCEE VSDMANNALYLFDTNHDFSLYRTLGHPPRASRAAGRLSYPAAIAQHAQDGGSLSGDLFIA EHHCCCCEEEEEECCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCCEEEE DTDNDRAQRWNTSGYTYWAKGVRPGSGGGGGGGGGSGGSGGGGGGGGGGGGGTTTPPTNL ECCCCHHHEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPPQLSGPPEVGFQLTCFTGSWSGSPQAFERNWLRDGAPIAGATGATYLLTAADAGTQIS CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEE CRVRADSEAGTSEWVTTATVTIGGSGPVATAPVNTVPPAISGTAAVGQTLSCSQGTWSGS EEEEECCCCCCCCEEEEEEEEECCCCCEEECCCCCCCCCCCCHHHHCCEEECCCCCCCCC PTGYGYQWRRDGGAISGATGTTYVVTATDSGRALTCTVTASNSSGSTPQTSAPVTVAAAA CCCCCEEEECCCCEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEC GPVNTVPPAISGTAVVGQTLSCSLGTWSGSPTGYGYQWRRDGAAISGATGTTYVVTATDS CCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCEEEECCCCEEECCCCCEEEEEECCC GRALTCTVTASNSSGSTPQTSAPVTVTADSPVNTVPPIVSGSANIGEALTCLPGAWSGSG CCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC VSYEYAWKRNNVAIPLATWSSYTILSEDVGASLTCTVTASNGQGTAQATSAGFGIGGPSG CEEEEEEECCCEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCC HAPSNVTPPSLSGTAAPGETLTCDPGAWVGIPELVTTYSWQRSGRALAGATAATYDVVAA CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHCHHHCCCEEECCCEEEEEEEEE DAGSSLRCVVVVANGYGKAAVASPGVAVSGGGGTASCLGQIGVTVNDGATRVTTADVVLG CCCCCEEEEEEEECCCCCEEECCCCEEEECCCCHHHHHHCCCEEECCCCCEEEEEEEEEE IVAPSGVTSVTISNDFDFATAVTMPVTPSCTYAWTLRSTPGVAAMSSVFVRFGSSPMIYG EECCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEE YSILVDRTGG EEEEEECCCC >Mature Secondary Structure MRGFAPLGRFLGLAMVVAGLGTATLATAETAHAASADGPTAIGVSSNGTTYVGFASGGEL CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCE RRISVSGKPKPSISLDQDEAVDGIFVTAGDDIWVDYETGMSLFNAAGRLIVHYDHEPARS EEEEECCCCCCCEECCCCCCCCEEEEEECCCEEEEHHHCHHHHHCCCEEEEEECCCHHHH CDNSSPAHRYGGITANGNRIYVANRCDDSVSVYARNGDLQATVDLPGNDHPRGIAYGGPQ CCCCCCHHHHCCEEECCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCEEECCCC AGRPATLYVAIPDRGQILSYEAAGLRSSSKPSRTFTIRRPGGGNRPQPAGVAVDKWGQLT CCCCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCEE VSDMANNALYLFDTNHDFSLYRTLGHPPRASRAAGRLSYPAAIAQHAQDGGSLSGDLFIA EHHCCCCEEEEEECCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCCEEEE DTDNDRAQRWNTSGYTYWAKGVRPGSGGGGGGGGGSGGSGGGGGGGGGGGGGTTTPPTNL ECCCCHHHEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPPQLSGPPEVGFQLTCFTGSWSGSPQAFERNWLRDGAPIAGATGATYLLTAADAGTQIS CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEE CRVRADSEAGTSEWVTTATVTIGGSGPVATAPVNTVPPAISGTAAVGQTLSCSQGTWSGS EEEEECCCCCCCCEEEEEEEEECCCCCEEECCCCCCCCCCCCHHHHCCEEECCCCCCCCC PTGYGYQWRRDGGAISGATGTTYVVTATDSGRALTCTVTASNSSGSTPQTSAPVTVAAAA CCCCCEEEECCCCEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEC GPVNTVPPAISGTAVVGQTLSCSLGTWSGSPTGYGYQWRRDGAAISGATGTTYVVTATDS CCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCEEEECCCCEEECCCCCEEEEEECCC GRALTCTVTASNSSGSTPQTSAPVTVTADSPVNTVPPIVSGSANIGEALTCLPGAWSGSG CCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC VSYEYAWKRNNVAIPLATWSSYTILSEDVGASLTCTVTASNGQGTAQATSAGFGIGGPSG CEEEEEEECCCEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCC HAPSNVTPPSLSGTAAPGETLTCDPGAWVGIPELVTTYSWQRSGRALAGATAATYDVVAA CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHCHHHCCCEEECCCEEEEEEEEE DAGSSLRCVVVVANGYGKAAVASPGVAVSGGGGTASCLGQIGVTVNDGATRVTTADVVLG CCCCCEEEEEEEECCCCCEEECCCCEEEECCCCHHHHHHCCCEEECCCCCEEEEEEEEEE IVAPSGVTSVTISNDFDFATAVTMPVTPSCTYAWTLRSTPGVAAMSSVFVRFGSSPMIYG EECCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEE YSILVDRTGG EEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA