Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718258

Identifier: 119718258

GI number: 119718258

Start: 4263204

End: 4263806

Strand: Reverse

Name: 119718258

Synonym: Noca_4039

Alternate gene names: NA

Gene position: 4263806-4263204 (Counterclockwise)

Preceding gene: 119718259

Following gene: 119718256

Centisome position: 85.52

GC content: 76.45

Gene sequence:

>603_bases
ATGACCCACGATCCGTACGACGTCCCCGACGATCCCGCGCCGGCGCTCGGGACCGTGCTGGCCGACGGGCGCGGGTCGCT
GCCGTTCGCGCTGATCCACGGCGAGGCGCTGGTCGCCTGTGCGGCGTGGGCGCTCGGCGAGGCCGGCGTGCTCCCGATCG
ACGACGGCATCGAGTGGTCGGCCGTGGTCGCGACCGGCGAGCCGCTCGTCGTGCACGACCCGCTGTGCCCGATGACCCCG
CCGGAGTTCGTCGCGGCGTGCGTGCGGCGTGCCGTCGAGGAGGACACGGTGGTGGTCGGGGTGCGGCCGGTGACCGACAC
GGTCAAGGTGGTCGCCGACGGGCTGGTCGGCGAGACCGTCGACCGCGACTCGCTGGTCTGCGTGGCCGCGCCGGTCGTGC
TGCCGGCGTCGGTGGTGGCCGCGCTCGACGGGCTGCCCTCCCACGACCTGGTCGGGCTGGTCGCCGCGCTGCGCCGCGAG
CACCCGGTCGAGCTGGTCGAGGCCCCGCCCGCCGCGCGCCGGGTCGGGTCCGAGGACGACGTCCGGCTGCTGGAGGCGCT
CACCGCAGGCGGTCGGCGACCGCCAGGTCCTCCGGGAACGTGA

Upstream 100 bases:

>100_bases
AGGTGCTCGCTTCCTGACCTGGTCATCGCGACGAGGCCCCCGGGGTGACCCCGGGGGCCTCGCTGCTTCCCGGGGTGAGA
CGTCATACCTTGTGGGGGCC

Downstream 100 bases:

>100_bases
CCTTCAGGTTGTGCGAGCTGCTCGGTACGGCGACCACCGGCAGGTCGGTGTAGCGGGCCCAGCAGGTCGCGGTGTCGGTG
CCCTCGAAGCCGTCCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTHDPYDVPDDPAPALGTVLADGRGSLPFALIHGEALVACAAWALGEAGVLPIDDGIEWSAVVATGEPLVVHDPLCPMTP
PEFVAACVRRAVEEDTVVVGVRPVTDTVKVVADGLVGETVDRDSLVCVAAPVVLPASVVAALDGLPSHDLVGLVAALRRE
HPVELVEAPPAARRVGSEDDVRLLEALTAGGRRPPGPPGT

Sequences:

>Translated_200_residues
MTHDPYDVPDDPAPALGTVLADGRGSLPFALIHGEALVACAAWALGEAGVLPIDDGIEWSAVVATGEPLVVHDPLCPMTP
PEFVAACVRRAVEEDTVVVGVRPVTDTVKVVADGLVGETVDRDSLVCVAAPVVLPASVVAALDGLPSHDLVGLVAALRRE
HPVELVEAPPAARRVGSEDDVRLLEALTAGGRRPPGPPGT
>Mature_199_residues
THDPYDVPDDPAPALGTVLADGRGSLPFALIHGEALVACAAWALGEAGVLPIDDGIEWSAVVATGEPLVVHDPLCPMTPP
EFVAACVRRAVEEDTVVVGVRPVTDTVKVVADGLVGETVDRDSLVCVAAPVVLPASVVAALDGLPSHDLVGLVAALRREH
PVELVEAPPAARRVGSEDDVRLLEALTAGGRRPPGPPGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20521; Mature: 20389

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHDPYDVPDDPAPALGTVLADGRGSLPFALIHGEALVACAAWALGEAGVLPIDDGIEWS
CCCCCCCCCCCCCCHHHHHEECCCCCCCEEEECCHHHHHHHHHHHCCCCCEECCCCCCEE
AVVATGEPLVVHDPLCPMTPPEFVAACVRRAVEEDTVVVGVRPVTDTVKVVADGLVGETV
EEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCC
DRDSLVCVAAPVVLPASVVAALDGLPSHDLVGLVAALRREHPVELVEAPPAARRVGSEDD
CCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHEECCCCHHHHCCCCHH
VRLLEALTAGGRRPPGPPGT
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
THDPYDVPDDPAPALGTVLADGRGSLPFALIHGEALVACAAWALGEAGVLPIDDGIEWS
CCCCCCCCCCCCCHHHHHEECCCCCCCEEEECCHHHHHHHHHHHCCCCCEECCCCCCEE
AVVATGEPLVVHDPLCPMTPPEFVAACVRRAVEEDTVVVGVRPVTDTVKVVADGLVGETV
EEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCC
DRDSLVCVAAPVVLPASVVAALDGLPSHDLVGLVAALRREHPVELVEAPPAARRVGSEDD
CCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHEECCCCHHHHCCCCHH
VRLLEALTAGGRRPPGPPGT
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA