| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is proY [C]
Identifier: 119718256
GI number: 119718256
Start: 4260860
End: 4262320
Strand: Reverse
Name: proY [C]
Synonym: Noca_4037
Alternate gene names: 119718256
Gene position: 4262320-4260860 (Counterclockwise)
Preceding gene: 119718258
Following gene: 119718255
Centisome position: 85.49
GC content: 66.26
Gene sequence:
>1461_bases ATGAGCGAACAAGCCCCGAGACGTATCCACGAGCGGGGTGGGATCGATGCTTCCGTCGAAGGAACCGAGTACTTCGAGAA GCGTCAGCTCGCAGGTGGGGTGGCCGGCTGGCTGCTCCTGGCGGGGCTGGGTGTTGCCTACGTCATCTCCGGAGACTTCG CAGGCTGGAACTTCGGCATGGGCGAAGGCGGCTGGGGCGGGATGCTGATCGCCACCGGCCTGATGGGGACGATGTACCTG TTCATGGTCCTGGGGCTCGCGGAGCTCTCCTCGACCATCTCGACGACCGGGGGCGGCTACGCGTTCGCCCGCCGGGCCAT GGGGCCGTGGGGCGGGTTCCTCACCGGCACCGCGATTCTCATCGAGTACGCCATCGCGCCCGCGGCGATCGCGAACTTCA TCGGCGCCTACGTCGAGTCGCTGACCGGCTTCGACGTCGGCTGGGTCGTCTTCCTGGTCTTCTACGCCGTCTTCATCGGC CTCCACCTGTGGGGCGTCGGTGAGGCGTTGAAGCTCATGTTCGTGATCACCGCGATCGCGGTCGTCGCCCTGTTCGTCTT CGTGATCGCAGCGCTGCCGAAGTTCGACGCCTCGAACCTCAACAGCATCCCGGTGGACACCTCGGCGTTCGGGTCGAGCT CGTTCCTGCCGTTCGGTCTGGTCGGCATCTGGGCCGCACTGCCCTACGCCATCTGGTTCTACCTGGCCGTCGAGGGCGTG CCGCTGGCTGCTGAGGAGTCCAAGGATCCGGCCAAGGACATGCCGCGCGGCATCATCGCCGCCATCGTGACGCTGCTCGT CTTCGCGTTCGTCATCCTCCTGGTGGCGCCGGGCGCGGCCGGCTCGGACTTCCTGAAGGACTCGGGCAACCCGCTGGTCG AGGCCCTCGAGGCCCCCGGCGCCTATGGCGGCCAGAACCTGGTCAGTCAGTTCATCAACCTGGTCGGCCTCCTCGGCCTG ATCGCGAGCTTCTTCTCGATCATCTTCGCCTACTCCCGCCAGACGTTCGCGCTGTCGCGTGCCGGTTATCTGCCGAAGTT CCTTTCGCTCACCGGCCAGAGGAAGACGCCGTACGTCGCCCTGATCGTCCCGGGCATCATCGGCTTCGTCATGGCCGTGC TCAACCAGGGCGACCTGCTCATCCTGGTGGCGGTCTTCGGCGCCACGATCTCGTACGTCATGATGACGCTCTCGCACATC ATCTTGCGGTTCAAGGAGCCCGAGCTCGACCGGCCCTACCGCACGCCCGGTGGCGTCGTCACGACCGGCATCGCCTGTGT GCTGGGCGTGGTGGCCCTCATCGCAGGGTTCCTCGTGGACACCCGCGTGGTCGCCATCACCGCCGGCGTCTACGTGATCG CCATCGCCTACTTCGGCCTCTACAGCCGACACCACATCGTGGCGTCGGCTCCCGAGGAGGAGTTCGCCCTGATCGAGTCC TCCGAGTCCGAGCTGCACTGA
Upstream 100 bases:
>100_bases GCCCGAACTCGTTGCTCGAGGACGGTTGAAATGTTTAGCGTCACCCCGCGGCTCTCGGGCCGCTCTAGAGCCACATTGGC GCGACCTAAGGACGGTCCGA
Downstream 100 bases:
>100_bases CATGCGCATCGCACGAGTGGTTGGCTCGGCGGTCTCGACCGTCAAGGACCCGAGCCTGGTCGGGCACAAGCTCCTCCTGG TCCAGGAGACGGACGCAAGC
Product: ethanolamine transporter
Products: Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MSEQAPRRIHERGGIDASVEGTEYFEKRQLAGGVAGWLLLAGLGVAYVISGDFAGWNFGMGEGGWGGMLIATGLMGTMYL FMVLGLAELSSTISTTGGGYAFARRAMGPWGGFLTGTAILIEYAIAPAAIANFIGAYVESLTGFDVGWVVFLVFYAVFIG LHLWGVGEALKLMFVITAIAVVALFVFVIAALPKFDASNLNSIPVDTSAFGSSSFLPFGLVGIWAALPYAIWFYLAVEGV PLAAEESKDPAKDMPRGIIAAIVTLLVFAFVILLVAPGAAGSDFLKDSGNPLVEALEAPGAYGGQNLVSQFINLVGLLGL IASFFSIIFAYSRQTFALSRAGYLPKFLSLTGQRKTPYVALIVPGIIGFVMAVLNQGDLLILVAVFGATISYVMMTLSHI ILRFKEPELDRPYRTPGGVVTTGIACVLGVVALIAGFLVDTRVVAITAGVYVIAIAYFGLYSRHHIVASAPEEEFALIES SESELH
Sequences:
>Translated_486_residues MSEQAPRRIHERGGIDASVEGTEYFEKRQLAGGVAGWLLLAGLGVAYVISGDFAGWNFGMGEGGWGGMLIATGLMGTMYL FMVLGLAELSSTISTTGGGYAFARRAMGPWGGFLTGTAILIEYAIAPAAIANFIGAYVESLTGFDVGWVVFLVFYAVFIG LHLWGVGEALKLMFVITAIAVVALFVFVIAALPKFDASNLNSIPVDTSAFGSSSFLPFGLVGIWAALPYAIWFYLAVEGV PLAAEESKDPAKDMPRGIIAAIVTLLVFAFVILLVAPGAAGSDFLKDSGNPLVEALEAPGAYGGQNLVSQFINLVGLLGL IASFFSIIFAYSRQTFALSRAGYLPKFLSLTGQRKTPYVALIVPGIIGFVMAVLNQGDLLILVAVFGATISYVMMTLSHI ILRFKEPELDRPYRTPGGVVTTGIACVLGVVALIAGFLVDTRVVAITAGVYVIAIAYFGLYSRHHIVASAPEEEFALIES SESELH >Mature_485_residues SEQAPRRIHERGGIDASVEGTEYFEKRQLAGGVAGWLLLAGLGVAYVISGDFAGWNFGMGEGGWGGMLIATGLMGTMYLF MVLGLAELSSTISTTGGGYAFARRAMGPWGGFLTGTAILIEYAIAPAAIANFIGAYVESLTGFDVGWVVFLVFYAVFIGL HLWGVGEALKLMFVITAIAVVALFVFVIAALPKFDASNLNSIPVDTSAFGSSSFLPFGLVGIWAALPYAIWFYLAVEGVP LAAEESKDPAKDMPRGIIAAIVTLLVFAFVILLVAPGAAGSDFLKDSGNPLVEALEAPGAYGGQNLVSQFINLVGLLGLI ASFFSIIFAYSRQTFALSRAGYLPKFLSLTGQRKTPYVALIVPGIIGFVMAVLNQGDLLILVAVFGATISYVMMTLSHII LRFKEPELDRPYRTPGGVVTTGIACVLGVVALIAGFLVDTRVVAITAGVYVIAIAYFGLYSRHHIVASAPEEEFALIESS ESELH
Specific function: Probable amino-acid or metabolite transport protein [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI258645169, Length=373, Percent_Identity=23.3243967828418, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI258614005, Length=374, Percent_Identity=22.9946524064171, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI258614003, Length=374, Percent_Identity=22.9946524064171, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI4507047, Length=380, Percent_Identity=23.1578947368421, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI181337167, Length=338, Percent_Identity=24.2603550295858, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI1786602, Length=397, Percent_Identity=23.4256926952141, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1790653, Length=396, Percent_Identity=22.979797979798, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786789, Length=398, Percent_Identity=22.3618090452261, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786302, Length=365, Percent_Identity=22.7397260273973, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1789017, Length=362, Percent_Identity=23.2044198895028, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17532491, Length=368, Percent_Identity=22.8260869565217, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324059, Length=325, Percent_Identity=24.3076923076923, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6321629, Length=412, Percent_Identity=24.7572815533981, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324061, Length=430, Percent_Identity=23.0232558139535, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI221512776, Length=378, Percent_Identity=26.4550264550265, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI24666159, Length=378, Percent_Identity=26.4550264550265, Blast_Score=92, Evalue=9e-19, Organism=Drosophila melanogaster, GI24668806, Length=366, Percent_Identity=21.8579234972678, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI21356285, Length=366, Percent_Identity=21.8579234972678, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24668802, Length=366, Percent_Identity=21.8579234972678, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24667468, Length=370, Percent_Identity=23.5135135135135, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI161077963, Length=337, Percent_Identity=22.5519287833828, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 51438; Mature: 51307
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQAPRRIHERGGIDASVEGTEYFEKRQLAGGVAGWLLLAGLGVAYVISGDFAGWNFGM CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC GEGGWGGMLIATGLMGTMYLFMVLGLAELSSTISTTGGGYAFARRAMGPWGGFLTGTAIL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH IEYAIAPAAIANFIGAYVESLTGFDVGWVVFLVFYAVFIGLHLWGVGEALKLMFVITAIA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVALFVFVIAALPKFDASNLNSIPVDTSAFGSSSFLPFGLVGIWAALPYAIWFYLAVEGV HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PLAAEESKDPAKDMPRGIIAAIVTLLVFAFVILLVAPGAAGSDFLKDSGNPLVEALEAPG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHCCC AYGGQNLVSQFINLVGLLGLIASFFSIIFAYSRQTFALSRAGYLPKFLSLTGQRKTPYVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCCCEEE LIVPGIIGFVMAVLNQGDLLILVAVFGATISYVMMTLSHIILRFKEPELDRPYRTPGGVV EHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH TTGIACVLGVVALIAGFLVDTRVVAITAGVYVIAIAYFGLYSRHHIVASAPEEEFALIES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHCC SESELH CHHCCC >Mature Secondary Structure SEQAPRRIHERGGIDASVEGTEYFEKRQLAGGVAGWLLLAGLGVAYVISGDFAGWNFGM CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC GEGGWGGMLIATGLMGTMYLFMVLGLAELSSTISTTGGGYAFARRAMGPWGGFLTGTAIL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH IEYAIAPAAIANFIGAYVESLTGFDVGWVVFLVFYAVFIGLHLWGVGEALKLMFVITAIA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVALFVFVIAALPKFDASNLNSIPVDTSAFGSSSFLPFGLVGIWAALPYAIWFYLAVEGV HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PLAAEESKDPAKDMPRGIIAAIVTLLVFAFVILLVAPGAAGSDFLKDSGNPLVEALEAPG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHCCC AYGGQNLVSQFINLVGLLGLIASFFSIIFAYSRQTFALSRAGYLPKFLSLTGQRKTPYVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCCCEEE LIVPGIIGFVMAVLNQGDLLILVAVFGATISYVMMTLSHIILRFKEPELDRPYRTPGGVV EHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH TTGIACVLGVVALIAGFLVDTRVVAITAGVYVIAIAYFGLYSRHHIVASAPEEEFALIES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHCC SESELH CHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]