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The map label for this gene is 119718147

Identifier: 119718147

GI number: 119718147

Start: 4134321

End: 4134791

Strand: Reverse

Name: 119718147

Synonym: Noca_3927

Alternate gene names: NA

Gene position: 4134791-4134321 (Counterclockwise)

Preceding gene: 119718148

Following gene: 119718146

Centisome position: 82.93

GC content: 71.13

Gene sequence:

>471_bases
ATGAGTTATGCTAACGGTATGCCGACATTGCAGAAGGTCTCCAGGACTGACGCCGGGCTCGCCGCGGAGCTCCGGCTCAG
CGTGATGCGCCTGCGCCGCCGGCTGGCCGGAGAGCGGCACCCCGACAACGAGCTGAGTCTCAACCAGATGGGCGTGCTCG
GCGTGCTTTACCGGACCGGTGACGGGTTGACCATCGGCGAGCTGGCGGCGGCCGAGCGGGTGCAGCCGCCCTCGATGACC
CGCACCGTGAACTGCCTGGAGGAGACCGGCGACGTCGTACGGCGTCCCCACGAGACCGACGGCCGCCAGGTCGTGGTCGA
GCTCTCCGACCAGGGCCGCGCCCGGGTGCTCGCCGACCGCGACCGACGGGACGCCTGGCTGGCCCAGCGGCTCAAGGAGC
TGACGCCCGACGAGCGGGCGATCCTCCGCCAGGCGGCCCCCCTCCTCGAGCACCTTGCCCAACGAGACTGA

Upstream 100 bases:

>100_bases
CTCACCTGACCGACCCGTTCCCTGTCGTCGACCCGCCCGCGGACCTCCCGGGCGGGTCGACGGCATTTCGCGCCCGAAGA
GGGAATCGTTAGCACAGGTA

Downstream 100 bases:

>100_bases
CCAGAAGGACTGACCACCACACTGTGAGCCCCACGTTCCGCTCCCTGCGCAACCCGAACTACCGGCGCTACCTCGCCGGC
AGCCTGGTGTCCAACACCGG

Product: regulatory protein MarR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSYANGMPTLQKVSRTDAGLAAELRLSVMRLRRRLAGERHPDNELSLNQMGVLGVLYRTGDGLTIGELAAAERVQPPSMT
RTVNCLEETGDVVRRPHETDGRQVVVELSDQGRARVLADRDRRDAWLAQRLKELTPDERAILRQAAPLLEHLAQRD

Sequences:

>Translated_156_residues
MSYANGMPTLQKVSRTDAGLAAELRLSVMRLRRRLAGERHPDNELSLNQMGVLGVLYRTGDGLTIGELAAAERVQPPSMT
RTVNCLEETGDVVRRPHETDGRQVVVELSDQGRARVLADRDRRDAWLAQRLKELTPDERAILRQAAPLLEHLAQRD
>Mature_155_residues
SYANGMPTLQKVSRTDAGLAAELRLSVMRLRRRLAGERHPDNELSLNQMGVLGVLYRTGDGLTIGELAAAERVQPPSMTR
TVNCLEETGDVVRRPHETDGRQVVVELSDQGRARVLADRDRRDAWLAQRLKELTPDERAILRQAAPLLEHLAQRD

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17473; Mature: 17342

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYANGMPTLQKVSRTDAGLAAELRLSVMRLRRRLAGERHPDNELSLNQMGVLGVLYRTG
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECC
DGLTIGELAAAERVQPPSMTRTVNCLEETGDVVRRPHETDGRQVVVELSDQGRARVLADR
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEECCCC
DRRDAWLAQRLKELTPDERAILRQAAPLLEHLAQRD
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYANGMPTLQKVSRTDAGLAAELRLSVMRLRRRLAGERHPDNELSLNQMGVLGVLYRTG
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECC
DGLTIGELAAAERVQPPSMTRTVNCLEETGDVVRRPHETDGRQVVVELSDQGRARVLADR
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEECCCC
DRRDAWLAQRLKELTPDERAILRQAAPLLEHLAQRD
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]