Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718146

Identifier: 119718146

GI number: 119718146

Start: 4132924

End: 4134297

Strand: Reverse

Name: 119718146

Synonym: Noca_3926

Alternate gene names: NA

Gene position: 4134297-4132924 (Counterclockwise)

Preceding gene: 119718147

Following gene: 119718145

Centisome position: 82.92

GC content: 70.01

Gene sequence:

>1374_bases
GTGAGCCCCACGTTCCGCTCCCTGCGCAACCCGAACTACCGGCGCTACCTCGCCGGCAGCCTGGTGTCCAACACCGGGAC
CTGGATGCAACGGGTGGCCCAGGACTGGCTGGTGCTCCAGCTGCCGGGCAACAGCGGCAGCGAGCTCGGGATCACCACCG
GGCTGCAGTTCCTGCCGATCCTGCTGCTGAGCCCCTACGCCGGGGTCGTCGCGGACCGGTTCCCGAAGCGCCGGCTGCTG
CAGGTCACCCAGGCGACGATGGCGCTCGCGTCGCTGGCGCTCGGCCTGATCGCGGTGCTCGGGGTCGCGCAGACCTGGCA
CGTCTACCTGATCGCGTTCCTCTTCGGCATCGGCGCGGCCTTCGACGGTCCGGCCCGACAGTCGTTCGTCTCCGAGATGG
TCGGCCCCGAGGACCTCACCAACGCGGTGGGCCTGAACTCCGCGAGCTTCAACGCCGCCCGGATCCTCGGCCCGGCCGTC
GCCGGCCTGATGATCGGCGCGCTCGGCGGTGGCGCGCAGGCGACCGGCTGGGTGATCCTCGTCAACGCCGCGTCGTACCT
CGCCGTGATCGGCCAGCTCCAGCGGATGGACGTGGTGCTGCTGCATCCGGCCGAGATCCAGGACCGCACGCCCGGCATGC
TCGTCGACGGCGTCCGCTACGTGCGCAGCCAGCCCAAGATGGTGCTGATCCTGATCATGGTCTTCTTCGCCGGCACCTTC
GGCATGAACTTCCAGATCACGTCGGCGCTGATGGCCACCGAGGTGTTCGGCAAGGGCGCGGGGGAGTACGGCGTCCTCGG
CTCGGCGCTCGCGGTCGGGTCGCTGACCGGGGCGCTGCTGACCGCCCGGCGAGTCCAGATCCGGGTCCGGCTGCTGGTGC
TCGCCGCGCTCGGCTTCGGCACCGCCGAGATCATCGGTGGCCTGCTCCCGTCGTACCTGTTGTTCGCGCTGTTCTCACCG
GTCATCGGGTTCTTCACGCTGACCCTGCTCAGCTCGGCGAACGCCACCCTCCAGCTGGAGGCCGCCCCGGCGTTCCGCGG
CCGGGTGATGGCCCTCTACATGACCATCCTGATGGGCGGCACCCCGATCGGCGCGCCCATCATCGGCTGGGTCGCCCAGC
ACCTCGGTGCCCGGTGGGGCCTGATCATCGGCGGGACGCTGACCATCCTCGGCGTACTGTTGGCGCTGGCCGCCCATTCC
CGCCTCCGCGGCGGGGTGCGCACCGTTTTGACCGAGGTAGACCACCCGGGTAACCTTTTTCCTCGTGTCTGGGACAACCA
GGCCGTCGCGCGTGCCCGGAAGCAGTCGGGGAGTCAGGTCCTCGGATCCGGCACCGAAACTCCAGCAGCGGAAGCCCTCA
CCGGTTCTCGCTGA

Upstream 100 bases:

>100_bases
AGGAGCTGACGCCCGACGAGCGGGCGATCCTCCGCCAGGCGGCCCCCCTCCTCGAGCACCTTGCCCAACGAGACTGACCA
GAAGGACTGACCACCACACT

Downstream 100 bases:

>100_bases
AGCAGTGTGGAGCGGGCGACACGCCCGACCTCGGGGGTGGCGACGAGGGCCAGCACCACCCGGACACGCAGCAAGACACC
GTGCGAGCAGAGCGCCCGTA

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; Transmembrane Efflux Protein; Facilitator Superfamily Permease; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transporter; Multidrug ABC Transporter; MFS Permease; Macrolide-Efflux Protein; Permeases Of Facilitator Superfamily; Permease; Mfs Transporter; Transporter Facilitator Family Protein; Drug Resistance Efflux Protein; MFS Family Transporter Protein; Facilitator Superfamily; Transporter Facilitator Family; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; Facilitator MFS1 Protein; ABC Transporter Permease Protein; Pimh Protein; MFS Family Membrane Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Membrane Efflux Protein MFS; MFS Family Transporter; Transport Transmembrane Protein; MFS Superfamily Transporter; Permeases Of Facilitator Superfamily Protein

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MSPTFRSLRNPNYRRYLAGSLVSNTGTWMQRVAQDWLVLQLPGNSGSELGITTGLQFLPILLLSPYAGVVADRFPKRRLL
QVTQATMALASLALGLIAVLGVAQTWHVYLIAFLFGIGAAFDGPARQSFVSEMVGPEDLTNAVGLNSASFNAARILGPAV
AGLMIGALGGGAQATGWVILVNAASYLAVIGQLQRMDVVLLHPAEIQDRTPGMLVDGVRYVRSQPKMVLILIMVFFAGTF
GMNFQITSALMATEVFGKGAGEYGVLGSALAVGSLTGALLTARRVQIRVRLLVLAALGFGTAEIIGGLLPSYLLFALFSP
VIGFFTLTLLSSANATLQLEAAPAFRGRVMALYMTILMGGTPIGAPIIGWVAQHLGARWGLIIGGTLTILGVLLALAAHS
RLRGGVRTVLTEVDHPGNLFPRVWDNQAVARARKQSGSQVLGSGTETPAAEALTGSR

Sequences:

>Translated_457_residues
MSPTFRSLRNPNYRRYLAGSLVSNTGTWMQRVAQDWLVLQLPGNSGSELGITTGLQFLPILLLSPYAGVVADRFPKRRLL
QVTQATMALASLALGLIAVLGVAQTWHVYLIAFLFGIGAAFDGPARQSFVSEMVGPEDLTNAVGLNSASFNAARILGPAV
AGLMIGALGGGAQATGWVILVNAASYLAVIGQLQRMDVVLLHPAEIQDRTPGMLVDGVRYVRSQPKMVLILIMVFFAGTF
GMNFQITSALMATEVFGKGAGEYGVLGSALAVGSLTGALLTARRVQIRVRLLVLAALGFGTAEIIGGLLPSYLLFALFSP
VIGFFTLTLLSSANATLQLEAAPAFRGRVMALYMTILMGGTPIGAPIIGWVAQHLGARWGLIIGGTLTILGVLLALAAHS
RLRGGVRTVLTEVDHPGNLFPRVWDNQAVARARKQSGSQVLGSGTETPAAEALTGSR
>Mature_456_residues
SPTFRSLRNPNYRRYLAGSLVSNTGTWMQRVAQDWLVLQLPGNSGSELGITTGLQFLPILLLSPYAGVVADRFPKRRLLQ
VTQATMALASLALGLIAVLGVAQTWHVYLIAFLFGIGAAFDGPARQSFVSEMVGPEDLTNAVGLNSASFNAARILGPAVA
GLMIGALGGGAQATGWVILVNAASYLAVIGQLQRMDVVLLHPAEIQDRTPGMLVDGVRYVRSQPKMVLILIMVFFAGTFG
MNFQITSALMATEVFGKGAGEYGVLGSALAVGSLTGALLTARRVQIRVRLLVLAALGFGTAEIIGGLLPSYLLFALFSPV
IGFFTLTLLSSANATLQLEAAPAFRGRVMALYMTILMGGTPIGAPIIGWVAQHLGARWGLIIGGTLTILGVLLALAAHSR
LRGGVRTVLTEVDHPGNLFPRVWDNQAVARARKQSGSQVLGSGTETPAAEALTGSR

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48135; Mature: 48004

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTFRSLRNPNYRRYLAGSLVSNTGTWMQRVAQDWLVLQLPGNSGSELGITTGLQFLPI
CCCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHH
LLLSPYAGVVADRFPKRRLLQVTQATMALASLALGLIAVLGVAQTWHVYLIAFLFGIGAA
HHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FDGPARQSFVSEMVGPEDLTNAVGLNSASFNAARILGPAVAGLMIGALGGGAQATGWVIL
CCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
VNAASYLAVIGQLQRMDVVLLHPAEIQDRTPGMLVDGVRYVRSQPKMVLILIMVFFAGTF
EEHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHC
GMNFQITSALMATEVFGKGAGEYGVLGSALAVGSLTGALLTARRVQIRVRLLVLAALGFG
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TAEIIGGLLPSYLLFALFSPVIGFFTLTLLSSANATLQLEAAPAFRGRVMALYMTILMGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCC
TPIGAPIIGWVAQHLGARWGLIIGGTLTILGVLLALAAHSRLRGGVRTVLTEVDHPGNLF
CCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PRVWDNQAVARARKQSGSQVLGSGTETPAAEALTGSR
CCCCCCHHHHHHHHHCCCEECCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
SPTFRSLRNPNYRRYLAGSLVSNTGTWMQRVAQDWLVLQLPGNSGSELGITTGLQFLPI
CCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHH
LLLSPYAGVVADRFPKRRLLQVTQATMALASLALGLIAVLGVAQTWHVYLIAFLFGIGAA
HHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FDGPARQSFVSEMVGPEDLTNAVGLNSASFNAARILGPAVAGLMIGALGGGAQATGWVIL
CCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
VNAASYLAVIGQLQRMDVVLLHPAEIQDRTPGMLVDGVRYVRSQPKMVLILIMVFFAGTF
EEHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHC
GMNFQITSALMATEVFGKGAGEYGVLGSALAVGSLTGALLTARRVQIRVRLLVLAALGFG
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TAEIIGGLLPSYLLFALFSPVIGFFTLTLLSSANATLQLEAAPAFRGRVMALYMTILMGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCC
TPIGAPIIGWVAQHLGARWGLIIGGTLTILGVLLALAAHSRLRGGVRTVLTEVDHPGNLF
CCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PRVWDNQAVARARKQSGSQVLGSGTETPAAEALTGSR
CCCCCCHHHHHHHHHCCCEECCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA