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The map label for this gene is rsmI [H]

Identifier: 119718080

GI number: 119718080

Start: 4078856

End: 4079698

Strand: Reverse

Name: rsmI [H]

Synonym: Noca_3860

Alternate gene names: 119718080

Gene position: 4079698-4078856 (Counterclockwise)

Preceding gene: 119718082

Following gene: 119718079

Centisome position: 81.83

GC content: 76.16

Gene sequence:

>843_bases
GTGCTCGTGCTGGCGGCGACCCCGATCGGCAGGGTCGCCGACGCGCCGCCGCGGCTCGCCGAGGAGCTGGCGAGCGCCGA
CGTCGTCGCGGCCGAGGACACCCGGCGCCTCAAGCGGCTCACGACCGACCTCGGGGTGAGCATCGGCGGACGGGTCGTGT
CGTACTTCGAGGGCAACGAGTCGGCGCGCACGCCGGCTCTCCTCGAGAGCCTCCTCGCGGGCGATCGGGTGCTGCTGGTC
ACCGACGCGGGCATGCCCAGCGTCTCCGACCCCGGCTACCGGCTCGTGGTCGCCGCGGTCGAGCACGACGTGCGGGTCAC
CGCCGTCCCCGGTCCGTCGGCGGTGCTGACCGCGCTCGCGGTCTCCGGCCTGCCCGTCGACCGGTTCTGCTTCGAGGGGT
TCCTGCCCCGCAAGGCGGGGGAGCGGCAGCGCCGCCTGGCCGACCTGCGCGACGAGCGCCGCACGATGGTGTTCTTCGAG
GCGCCGCACCGCACCGAGGCCGCGCTCGCCGCGATGGCCGAGGCGCTCGGCGCCGACCGCGCCGCCGCGGTCTGCCGCGA
GCTCACCAAGACCCACGAGGAGGTACGGCGAGGTCCGCTCGCCGAGCTCGTGTCCTGGGCGGCCGAGGGGGTGCGCGGCG
AGGTCACCATCGTGGTGGCGGGCGCCGCGCCGGCGGCCGAGGTCGCCAGCGACCCGGCGAGCCTGCGGACCGCGGTCGCC
GACCTGGTGCGCGAGGGCGTGCCGCGCAAGGAGGCGATCGTCGTGGTCGCCCGCCGCGCCGGCGTACCGAAGCGCGAGGT
CTACAACCTGGTTCACGACCGGGACCACGGGGCACAGGAGTGA

Upstream 100 bases:

>100_bases
GCTCCCAGGCGGAGGGAGGGGCGCCGGTCGTCACGGGCCCGAGGATACGGGCCCCGGGATCAGACGCTGCGATGATCGGG
GCGTGGACGACAGCCTGGGC

Downstream 100 bases:

>100_bases
GCATGAACGCACGGATCACCCGGCTGCAGCACGACGGCCTCACCTTCGACGTCCTCGACGAGGGGCCGCTGGACGGGACG
CCCGTCGTGCTGCTGCACGG

Product: uroporphyrin-III C/tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLVLAATPIGRVADAPPRLAEELASADVVAAEDTRRLKRLTTDLGVSIGGRVVSYFEGNESARTPALLESLLAGDRVLLV
TDAGMPSVSDPGYRLVVAAVEHDVRVTAVPGPSAVLTALAVSGLPVDRFCFEGFLPRKAGERQRRLADLRDERRTMVFFE
APHRTEAALAAMAEALGADRAAAVCRELTKTHEEVRRGPLAELVSWAAEGVRGEVTIVVAGAAPAAEVASDPASLRTAVA
DLVREGVPRKEAIVVVARRAGVPKREVYNLVHDRDHGAQE

Sequences:

>Translated_280_residues
MLVLAATPIGRVADAPPRLAEELASADVVAAEDTRRLKRLTTDLGVSIGGRVVSYFEGNESARTPALLESLLAGDRVLLV
TDAGMPSVSDPGYRLVVAAVEHDVRVTAVPGPSAVLTALAVSGLPVDRFCFEGFLPRKAGERQRRLADLRDERRTMVFFE
APHRTEAALAAMAEALGADRAAAVCRELTKTHEEVRRGPLAELVSWAAEGVRGEVTIVVAGAAPAAEVASDPASLRTAVA
DLVREGVPRKEAIVVVARRAGVPKREVYNLVHDRDHGAQE
>Mature_280_residues
MLVLAATPIGRVADAPPRLAEELASADVVAAEDTRRLKRLTTDLGVSIGGRVVSYFEGNESARTPALLESLLAGDRVLLV
TDAGMPSVSDPGYRLVVAAVEHDVRVTAVPGPSAVLTALAVSGLPVDRFCFEGFLPRKAGERQRRLADLRDERRTMVFFE
APHRTEAALAAMAEALGADRAAAVCRELTKTHEEVRRGPLAELVSWAAEGVRGEVTIVVAGAAPAAEVASDPASLRTAVA
DLVREGVPRKEAIVVVARRAGVPKREVYNLVHDRDHGAQE

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=273, Percent_Identity=38.4615384615385, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 29757; Mature: 29757

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLAATPIGRVADAPPRLAEELASADVVAAEDTRRLKRLTTDLGVSIGGRVVSYFEGNE
CEEEEECCCCCCCCCCHHHHHHHHHCCEEECHHHHHHHHHHHHHCCCCCCEEEEEEECCC
SARTPALLESLLAGDRVLLVTDAGMPSVSDPGYRLVVAAVEHDVRVTAVPGPSAVLTALA
CCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHH
VSGLPVDRFCFEGFLPRKAGERQRRLADLRDERRTMVFFEAPHRTEAALAAMAEALGADR
HCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCHH
AAAVCRELTKTHEEVRRGPLAELVSWAAEGVRGEVTIVVAGAAPAAEVASDPASLRTAVA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHH
DLVREGVPRKEAIVVVARRAGVPKREVYNLVHDRDHGAQE
HHHHCCCCCCHHEEEEEHHCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLVLAATPIGRVADAPPRLAEELASADVVAAEDTRRLKRLTTDLGVSIGGRVVSYFEGNE
CEEEEECCCCCCCCCCHHHHHHHHHCCEEECHHHHHHHHHHHHHCCCCCCEEEEEEECCC
SARTPALLESLLAGDRVLLVTDAGMPSVSDPGYRLVVAAVEHDVRVTAVPGPSAVLTALA
CCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHH
VSGLPVDRFCFEGFLPRKAGERQRRLADLRDERRTMVFFEAPHRTEAALAAMAEALGADR
HCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCHH
AAAVCRELTKTHEEVRRGPLAELVSWAAEGVRGEVTIVVAGAAPAAEVASDPASLRTAVA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHH
DLVREGVPRKEAIVVVARRAGVPKREVYNLVHDRDHGAQE
HHHHCCCCCCHHEEEEEHHCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]