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The map label for this gene is 119718082

Identifier: 119718082

GI number: 119718082

Start: 4081595

End: 4082203

Strand: Reverse

Name: 119718082

Synonym: Noca_3862

Alternate gene names: NA

Gene position: 4082203-4081595 (Counterclockwise)

Preceding gene: 119718090

Following gene: 119718080

Centisome position: 81.88

GC content: 73.07

Gene sequence:

>609_bases
ATGTTGGACATGAGCGCGTCCAGCCCCGTTCCCGATGCCCGGACCCGGCTCGCGGCCGCCGCCGTGGACGCGTTCGCCGT
GCGCGGCTTCCACGGGACGACCACGCGCGACATCTCGACCAGCGCCGGGATGAGCCCGGCCGCGCTCTACGTCCACCACC
GCTCCAAGGAGGAGCTGCTCTTCGAGCTCGCGCGCGTGGGGCACCTGCGAGTGCTGGAGCTGGTGCGCGCGTCGGTGGCG
CCGCTGTCCGACCCCGTGGCCCAGCTCGGTCAGCTGGTCGAGGACTTCGTGCGCGACCACGCCGAGGCGCACACCGGGGC
GCGGGTGATCAACTACGAGCTCGCCGCGCTCAGTCCCGAGCACCATGCCGAGGTCCTCGCGATCCGCCACGAGATCGACC
TGGTGCTGCGTGACGTGCTCGACCGTGGCGTCGCCGCTGGCGTCTTCACCACGCCCGACCCCCGGATGACGGCCCTCGCC
ATCTTGTCCCTGGGCATCGACGTCGCCCGCTGGTACCGCGACGAGGGGCGCTGGGCCCCCGACGAGGTCGCCGCCCACTA
CCGCCTGCTCGCCCTCCGGATGGTCGGCGCCGAGTCGCCGCGTCCCTGA

Upstream 100 bases:

>100_bases
ATGCCGCGGCTGGCCCCGGTCACGATCGCGACCTTGCCGGCGAGTCCTTGCACGTGTCCTCCTGCGTCCTGGCTTGCTCC
TAGCTAAGCGCTTGCTTACC

Downstream 100 bases:

>100_bases
CGAACGGGCACGCGACACGCCGGGTGCGCGTGCGGTTGGTCAGGGGGCGAAGCGGCGGCCGGTAAGCCGGGTGCCCGACG
GTGACCCGAGCGTGCCGTGC

Product: regulatory protein TetR

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; Tetr Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; HTH-Type Transcriptional Repressor; Regulatory Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MLDMSASSPVPDARTRLAAAAVDAFAVRGFHGTTTRDISTSAGMSPAALYVHHRSKEELLFELARVGHLRVLELVRASVA
PLSDPVAQLGQLVEDFVRDHAEAHTGARVINYELAALSPEHHAEVLAIRHEIDLVLRDVLDRGVAAGVFTTPDPRMTALA
ILSLGIDVARWYRDEGRWAPDEVAAHYRLLALRMVGAESPRP

Sequences:

>Translated_202_residues
MLDMSASSPVPDARTRLAAAAVDAFAVRGFHGTTTRDISTSAGMSPAALYVHHRSKEELLFELARVGHLRVLELVRASVA
PLSDPVAQLGQLVEDFVRDHAEAHTGARVINYELAALSPEHHAEVLAIRHEIDLVLRDVLDRGVAAGVFTTPDPRMTALA
ILSLGIDVARWYRDEGRWAPDEVAAHYRLLALRMVGAESPRP
>Mature_202_residues
MLDMSASSPVPDARTRLAAAAVDAFAVRGFHGTTTRDISTSAGMSPAALYVHHRSKEELLFELARVGHLRVLELVRASVA
PLSDPVAQLGQLVEDFVRDHAEAHTGARVINYELAALSPEHHAEVLAIRHEIDLVLRDVLDRGVAAGVFTTPDPRMTALA
ILSLGIDVARWYRDEGRWAPDEVAAHYRLLALRMVGAESPRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22021; Mature: 22021

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDMSASSPVPDARTRLAAAAVDAFAVRGFHGTTTRDISTSAGMSPAALYVHHRSKEELL
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHH
FELARVGHLRVLELVRASVAPLSDPVAQLGQLVEDFVRDHAEAHTGARVINYELAALSPE
HHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCH
HHAEVLAIRHEIDLVLRDVLDRGVAAGVFTTPDPRMTALAILSLGIDVARWYRDEGRWAP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
DEVAAHYRLLALRMVGAESPRP
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLDMSASSPVPDARTRLAAAAVDAFAVRGFHGTTTRDISTSAGMSPAALYVHHRSKEELL
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHH
FELARVGHLRVLELVRASVAPLSDPVAQLGQLVEDFVRDHAEAHTGARVINYELAALSPE
HHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCH
HHAEVLAIRHEIDLVLRDVLDRGVAAGVFTTPDPRMTALAILSLGIDVARWYRDEGRWAP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
DEVAAHYRLLALRMVGAESPRP
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA