| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717593
Identifier: 119717593
GI number: 119717593
Start: 3571248
End: 3571850
Strand: Reverse
Name: 119717593
Synonym: Noca_3370
Alternate gene names: NA
Gene position: 3571850-3571248 (Counterclockwise)
Preceding gene: 119717594
Following gene: 119717591
Centisome position: 71.64
GC content: 75.29
Gene sequence:
>603_bases GTGTCGACCTCGCCGCACTCCACCTGGCCCGGACTGTCCGACAGCGCCCACTCCGAGTGGTACGTCGGAAGGTTCCGGGC GATGGCCGCCAGCGGCCAGGACCTCCAGGGCGAGTCCCGCCTGACCGACGTCCTGGCGCCGCGCGGCGCCCGGCTGCTGG ACGCCGGCTGCGGCCCGGGCCGGCACGGCGGGCACCTGGCGCAGCTCGGCCACGACGTCGTCGGCGTCGACATCGACCCG ACGCTGATCGAGGCGGCGCGCGAGGACTACCCGGGCGTGGCCTGGCTGGTCGGCGACCTGGCGACCCTCGACCTGGCCGC CGCGGGGGAGGCCGAGCCCTTCGACGGCGCGCTGATCGCCGGCAACGTCATGGACTTCGTGACCGAGGACCACCGGGCGG CGGTGATCGAGCGGGTCGCGGCGCATCTCAAGACCGACGGGTTCCTCGTCGTCGGGTGCCGCACCGGCACCGGCTTCACC CCGGCCGACCTGGACGCGACGCTGCCCGGCGCCGGCCTGCGGCTCGAGCAGCGGTTCGCCACCTGGGACCTGCGCCCGTG GCAGGACGACTCGTCGTTCTGCGTCAGCGTCCTGCGGCGCTGA
Upstream 100 bases:
>100_bases CCCGCTGGACCCCCGAGGTCGCTGACCGGGTCGCTGCGCTGGTGCGCTCGGCGACCTCCTGAGTCGTCGCCGGGTAGGGC CCTCGTGGGAGGATGAGGCG
Downstream 100 bases:
>100_bases TCAGTCCGAGCGGCGGCCGAACCACCGCGACAGCAGCACCGACCACTTCCCGCGGCCCCCGTCCGGCCGATCCGGGTCGT GCGGGGCCCCGGGGGCCTTC
Product: type 12 methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Methyltransferase Family Protein; LmbE Family Protein; MCP Methyltransferase CheR-Type; Menaquinone Biosynthesis Methyltransferase; Sam Dependent Methyltransferase
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSTSPHSTWPGLSDSAHSEWYVGRFRAMAASGQDLQGESRLTDVLAPRGARLLDAGCGPGRHGGHLAQLGHDVVGVDIDP TLIEAAREDYPGVAWLVGDLATLDLAAAGEAEPFDGALIAGNVMDFVTEDHRAAVIERVAAHLKTDGFLVVGCRTGTGFT PADLDATLPGAGLRLEQRFATWDLRPWQDDSSFCVSVLRR
Sequences:
>Translated_200_residues MSTSPHSTWPGLSDSAHSEWYVGRFRAMAASGQDLQGESRLTDVLAPRGARLLDAGCGPGRHGGHLAQLGHDVVGVDIDP TLIEAAREDYPGVAWLVGDLATLDLAAAGEAEPFDGALIAGNVMDFVTEDHRAAVIERVAAHLKTDGFLVVGCRTGTGFT PADLDATLPGAGLRLEQRFATWDLRPWQDDSSFCVSVLRR >Mature_199_residues STSPHSTWPGLSDSAHSEWYVGRFRAMAASGQDLQGESRLTDVLAPRGARLLDAGCGPGRHGGHLAQLGHDVVGVDIDPT LIEAAREDYPGVAWLVGDLATLDLAAAGEAEPFDGALIAGNVMDFVTEDHRAAVIERVAAHLKTDGFLVVGCRTGTGFTP ADLDATLPGAGLRLEQRFATWDLRPWQDDSSFCVSVLRR
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21275; Mature: 21144
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSPHSTWPGLSDSAHSEWYVGRFRAMAASGQDLQGESRLTDVLAPRGARLLDAGCGPG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCCCC RHGGHLAQLGHDVVGVDIDPTLIEAAREDYPGVAWLVGDLATLDLAAAGEAEPFDGALIA CCCCHHHHHCCCEEECCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCEEEE GNVMDFVTEDHRAAVIERVAAHLKTDGFLVVGCRTGTGFTPADLDATLPGAGLRLEQRFA CHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEHHHHH TWDLRPWQDDSSFCVSVLRR CCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure STSPHSTWPGLSDSAHSEWYVGRFRAMAASGQDLQGESRLTDVLAPRGARLLDAGCGPG CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCCCC RHGGHLAQLGHDVVGVDIDPTLIEAAREDYPGVAWLVGDLATLDLAAAGEAEPFDGALIA CCCCHHHHHCCCEEECCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCEEEE GNVMDFVTEDHRAAVIERVAAHLKTDGFLVVGCRTGTGFTPADLDATLPGAGLRLEQRFA CHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEHHHHH TWDLRPWQDDSSFCVSVLRR CCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA