| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717594
Identifier: 119717594
GI number: 119717594
Start: 3571889
End: 3572374
Strand: Reverse
Name: 119717594
Synonym: Noca_3371
Alternate gene names: NA
Gene position: 3572374-3571889 (Counterclockwise)
Preceding gene: 119717595
Following gene: 119717593
Centisome position: 71.65
GC content: 72.02
Gene sequence:
>486_bases ATGTCGCCGGCACGGTGCCGGCCGGACGGAAGGAGACCGACAGTGTCCACGGAGACCGACGGGGCCACGGGCTTCAGCGC CGCGGAGCGGGCCGCGATGAAGGAGCGCGCCGCCGAGCTGCGGGCCGCGGGCAAGAAGGGCGCCAAGCTCGCCGACGGCC TGCAGCAGGTCCTCGACGCGATCGAGAAGATGACGCCCGAGGACCGGGCGCTCGCCGAGCGAGTGCACGTCACGGTGACC GAGCACGCCCCCGACCTGGCGCCGAAGACCTGGTACGGCATGCCCGCCTACGCCAACGCGGACGGCAAGGTCGTGCTGTT CTTCAAGAACGCCGGCAAGTTCGGCGAGCGCTATTCCACCTTGGGCTTCGAGGGCGCCGCGCGGCTCGACGACGGCGACC TGTGGCCGACCGTCTTCGCGATCACCCGCTGGACCCCCGAGGTCGCTGACCGGGTCGCTGCGCTGGTGCGCTCGGCGACC TCCTGA
Upstream 100 bases:
>100_bases CGATCGGGCCGCTCACCCAGCTCTGGCTGCCGACCTTCACCGTCGAGCTGCCGGTCAGGAATCAAGAAGCGATCGTGCTG GCTTCGAACTAGGTTTCCTG
Downstream 100 bases:
>100_bases GTCGTCGCCGGGTAGGGCCCTCGTGGGAGGATGAGGCGGTGTCGACCTCGCCGCACTCCACCTGGCCCGGACTGTCCGAC AGCGCCCACTCCGAGTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSPARCRPDGRRPTVSTETDGATGFSAAERAAMKERAAELRAAGKKGAKLADGLQQVLDAIEKMTPEDRALAERVHVTVT EHAPDLAPKTWYGMPAYANADGKVVLFFKNAGKFGERYSTLGFEGAARLDDGDLWPTVFAITRWTPEVADRVAALVRSAT S
Sequences:
>Translated_161_residues MSPARCRPDGRRPTVSTETDGATGFSAAERAAMKERAAELRAAGKKGAKLADGLQQVLDAIEKMTPEDRALAERVHVTVT EHAPDLAPKTWYGMPAYANADGKVVLFFKNAGKFGERYSTLGFEGAARLDDGDLWPTVFAITRWTPEVADRVAALVRSAT S >Mature_160_residues SPARCRPDGRRPTVSTETDGATGFSAAERAAMKERAAELRAAGKKGAKLADGLQQVLDAIEKMTPEDRALAERVHVTVTE HAPDLAPKTWYGMPAYANADGKVVLFFKNAGKFGERYSTLGFEGAARLDDGDLWPTVFAITRWTPEVADRVAALVRSATS
Specific function: Unknown
COG id: COG5646
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17367; Mature: 17236
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPARCRPDGRRPTVSTETDGATGFSAAERAAMKERAAELRAAGKKGAKLADGLQQVLDA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH IEKMTPEDRALAERVHVTVTEHAPDLAPKTWYGMPAYANADGKVVLFFKNAGKFGERYST HHHCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCHHHHHHH LGFEGAARLDDGDLWPTVFAITRWTPEVADRVAALVRSATS CCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SPARCRPDGRRPTVSTETDGATGFSAAERAAMKERAAELRAAGKKGAKLADGLQQVLDA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH IEKMTPEDRALAERVHVTVTEHAPDLAPKTWYGMPAYANADGKVVLFFKNAGKFGERYST HHHCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCHHHHHHH LGFEGAARLDDGDLWPTVFAITRWTPEVADRVAALVRSATS CCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA