Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is yceH [C]

Identifier: 119717006

GI number: 119717006

Start: 2951987

End: 2953189

Strand: Reverse

Name: yceH [C]

Synonym: Noca_2782

Alternate gene names: 119717006

Gene position: 2953189-2951987 (Counterclockwise)

Preceding gene: 119717007

Following gene: 119717003

Centisome position: 59.23

GC content: 75.23

Gene sequence:

>1203_bases
GTGACCGACCTCCCCGCGCTCGACGCCGAGGAACAGCGCGTCCTCGGCAGCCTGCTGGAGAAGCAGCGCACGGTGCCGGA
CTCCTACCCGTTGACGCTGAACTCGCTGCGCACCGCGTGCAACCAGTCGAGCAGCCGCGAGCCGGTCGTCGACTACGACG
AGCACACCGTCGAGCAGGTCGGCCGCCGGCTCAAGGACCGCGGTCTGCTGCGCATCGTGTGGTCCGACACCGGGCGCCGC
ACCCTGAAGTACCACCAGGTCCTCGACGAGGTGCTCGACCTGGCCGAGGACGAGCGGGCGCTCGTGACGGTGCTGCTGCT
GCGCGGGCCGCAGGCACCCGGCGAGCTCAAGACCCGCACCGAGCGGCTGCACGGGTTCGCCGACCGGGGCGCGGTCGAGC
AGACACTCTCCCGGATGGCCGAGCGGGGACTGGTGCGCGAGCTCCCGCGCCGCGGTGGCGACCGGGACAGCCGCTGGGCG
CACCTGCTCGGCGAGGAGGCCGCTGTCGAGGAGGCGCCGGCGCCGATCGTGGACGTCCTGGCCGCCGGCGGGGGCGCGCG
GGACGAGCGGGTGCGCTCGTCGTACGACGCGGTCGCCACGGCGTACGCCGACCACCTGCTCGACGAGCTCGCCGGCCTGC
CGTTCGAGACCTGGCTGCTCGACCGGGTCGCCGCGCACGCCGCCGACGATCGGGCCGGCGGCCCGGTGGTGGACGCCGGC
TGCGGTCCCGGTCACGTCACGGCGTACCTCGCCGACGCCGGCGTCGACGCACACGGCATCGACCTCTCGCCGGCCATGGT
CGCCGAGGCGCGGCGCCGGTTCCCGGACGGCTCCTACGAGGTCGGCGACCTGCGCCGGCTGATGCGGCCGACGACCGCGG
AGGGCTGGGCCGCGGTGCTGGGCTGGTACTCGCTGGGCCACCTGGCCTCCGCCGAGCTCCCCGACGCCGTCGCCGCGCTC
GCGCGGCCGCTCGCACCGGGTGGCTGGCTGGTGCTCGCCGGGCACGCCGGTGTCGGCGTACGCCACCTCGACGCGTGGTT
CGAGCACGAGGTCGACCTCGACTTCGTCGCGCGCGAGCCCGAGGAGATCGTCGCCGCCGTCACCGCCGCCGGCCTGGTCG
ACGTGGAGTGGTTCCTCCGCGGCCCGTTGGCCGACCGTGGTGAGACGACCGAGCGCCTCTACCTCCTGGCCCGCCGAGGT
TGA

Upstream 100 bases:

>100_bases
CACGAGGACGTCGTACTGACCCTCACCGAGCTGCGGCGCTGGGATCCGGACGCCGGCCGGGTGACGACGATCGCCCAGGC
GCGTCAGTAGGGTCGCTCTC

Downstream 100 bases:

>100_bases
CTCAACGCGGGGTGAGGACCACGTCGTCGAGGACGGGGGCACCGTCGCGGTCACCGCCGGCGACCGTCGCGGAGCCGACG
ATCCGGCCGTCCTCGCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MTDLPALDAEEQRVLGSLLEKQRTVPDSYPLTLNSLRTACNQSSSREPVVDYDEHTVEQVGRRLKDRGLLRIVWSDTGRR
TLKYHQVLDEVLDLAEDERALVTVLLLRGPQAPGELKTRTERLHGFADRGAVEQTLSRMAERGLVRELPRRGGDRDSRWA
HLLGEEAAVEEAPAPIVDVLAAGGGARDERVRSSYDAVATAYADHLLDELAGLPFETWLLDRVAAHAADDRAGGPVVDAG
CGPGHVTAYLADAGVDAHGIDLSPAMVAEARRRFPDGSYEVGDLRRLMRPTTAEGWAAVLGWYSLGHLASAELPDAVAAL
ARPLAPGGWLVLAGHAGVGVRHLDAWFEHEVDLDFVAREPEEIVAAVTAAGLVDVEWFLRGPLADRGETTERLYLLARRG

Sequences:

>Translated_400_residues
MTDLPALDAEEQRVLGSLLEKQRTVPDSYPLTLNSLRTACNQSSSREPVVDYDEHTVEQVGRRLKDRGLLRIVWSDTGRR
TLKYHQVLDEVLDLAEDERALVTVLLLRGPQAPGELKTRTERLHGFADRGAVEQTLSRMAERGLVRELPRRGGDRDSRWA
HLLGEEAAVEEAPAPIVDVLAAGGGARDERVRSSYDAVATAYADHLLDELAGLPFETWLLDRVAAHAADDRAGGPVVDAG
CGPGHVTAYLADAGVDAHGIDLSPAMVAEARRRFPDGSYEVGDLRRLMRPTTAEGWAAVLGWYSLGHLASAELPDAVAAL
ARPLAPGGWLVLAGHAGVGVRHLDAWFEHEVDLDFVAREPEEIVAAVTAAGLVDVEWFLRGPLADRGETTERLYLLARRG
>Mature_399_residues
TDLPALDAEEQRVLGSLLEKQRTVPDSYPLTLNSLRTACNQSSSREPVVDYDEHTVEQVGRRLKDRGLLRIVWSDTGRRT
LKYHQVLDEVLDLAEDERALVTVLLLRGPQAPGELKTRTERLHGFADRGAVEQTLSRMAERGLVRELPRRGGDRDSRWAH
LLGEEAAVEEAPAPIVDVLAAGGGARDERVRSSYDAVATAYADHLLDELAGLPFETWLLDRVAAHAADDRAGGPVVDAGC
GPGHVTAYLADAGVDAHGIDLSPAMVAEARRRFPDGSYEVGDLRRLMRPTTAEGWAAVLGWYSLGHLASAELPDAVAALA
RPLAPGGWLVLAGHAGVGVRHLDAWFEHEVDLDFVAREPEEIVAAVTAAGLVDVEWFLRGPLADRGETTERLYLLARRG

Specific function: Unknown

COG id: COG3132

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0502 family [H]

Homologues:

Organism=Escherichia coli, GI1787306, Length=192, Percent_Identity=43.2291666666667, Blast_Score=128, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007432
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04337 DUF480 [H]

EC number: NA

Molecular weight: Translated: 43545; Mature: 43414

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLPALDAEEQRVLGSLLEKQRTVPDSYPLTLNSLRTACNQSSSREPVVDYDEHTVEQV
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCHHHHHHH
GRRLKDRGLLRIVWSDTGRRTLKYHQVLDEVLDLAEDERALVTVLLLRGPQAPGELKTRT
HHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHH
ERLHGFADRGAVEQTLSRMAERGLVRELPRRGGDRDSRWAHLLGEEAAVEEAPAPIVDVL
HHHHCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHCCCHHHHHH
AAGGGARDERVRSSYDAVATAYADHLLDELAGLPFETWLLDRVAAHAADDRAGGPVVDAG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEECC
CGPGHVTAYLADAGVDAHGIDLSPAMVAEARRRFPDGSYEVGDLRRLMRPTTAEGWAAVL
CCCCHHEEEHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHH
GWYSLGHLASAELPDAVAALARPLAPGGWLVLAGHAGVGVRHLDAWFEHEVDLDFVAREP
HHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHCCH
EEIVAAVTAAGLVDVEWFLRGPLADRGETTERLYLLARRG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEECCC
>Mature Secondary Structure 
TDLPALDAEEQRVLGSLLEKQRTVPDSYPLTLNSLRTACNQSSSREPVVDYDEHTVEQV
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCHHHHHHH
GRRLKDRGLLRIVWSDTGRRTLKYHQVLDEVLDLAEDERALVTVLLLRGPQAPGELKTRT
HHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHH
ERLHGFADRGAVEQTLSRMAERGLVRELPRRGGDRDSRWAHLLGEEAAVEEAPAPIVDVL
HHHHCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHCCCHHHHHH
AAGGGARDERVRSSYDAVATAYADHLLDELAGLPFETWLLDRVAAHAADDRAGGPVVDAG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEECC
CGPGHVTAYLADAGVDAHGIDLSPAMVAEARRRFPDGSYEVGDLRRLMRPTTAEGWAAVL
CCCCHHEEEHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHH
GWYSLGHLASAELPDAVAALARPLAPGGWLVLAGHAGVGVRHLDAWFEHEVDLDFVAREP
HHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHCCH
EEIVAAVTAAGLVDVEWFLRGPLADRGETTERLYLLARRG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA