| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717007
Identifier: 119717007
GI number: 119717007
Start: 2953200
End: 2953712
Strand: Reverse
Name: 119717007
Synonym: Noca_2783
Alternate gene names: NA
Gene position: 2953712-2953200 (Counterclockwise)
Preceding gene: 119717010
Following gene: 119717006
Centisome position: 59.24
GC content: 75.24
Gene sequence:
>513_bases ATGCCGAAGCTGCACGCCCTCGAGCTGGTCCCGGACGACGACGGCCTGAGGGCGGTGCATGGCGAGTGGCAACGGCTGCG CGACGCCGGCCTGCCCAGCCGGCTCGATCACCTGCGCCCGACCGACCAGCCGCACATCACGGTGGTCTCCGCGCCCGTGC TGCCCGACGACGCGATCGACGTGGCCCGGGCCCGGCTCGGCTCGCTGCTGCCCGTCCGCGCCCGGGCGGCGGGCCTGCTG CTGCTCGGCGGTGCGCGGCTCACGATCGCGCGGGCCGTGGACATCGACGACGACGTCGTACGCCGGGCGCTCGCCGTGCG CGTGCAAGTGCCCGACCGCCAGCACGTGGGATGGCTCCCGCACGTCACGCTGGCGCGCCGGGTGGAGCGGTCGGACGTGC AGCGCGCGATCGAGGTGCTCGGCCACGAGGACGTCGTACTGACCCTCACCGAGCTGCGGCGCTGGGATCCGGACGCCGGC CGGGTGACGACGATCGCCCAGGCGCGTCAGTAG
Upstream 100 bases:
>100_bases TGCAGCCGGAACAGCTCCGCCTCGTACTGCCCGCTGGTCAGCCGCCGCTTGGACTTCGCCATGCTCCGACCCTAGTCAGG CGCCAGGGAGGATGGACCGC
Downstream 100 bases:
>100_bases GGTCGCTCTCGTGACCGACCTCCCCGCGCTCGACGCCGAGGAACAGCGCGTCCTCGGCAGCCTGCTGGAGAAGCAGCGCA CGGTGCCGGACTCCTACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MPKLHALELVPDDDGLRAVHGEWQRLRDAGLPSRLDHLRPTDQPHITVVSAPVLPDDAIDVARARLGSLLPVRARAAGLL LLGGARLTIARAVDIDDDVVRRALAVRVQVPDRQHVGWLPHVTLARRVERSDVQRAIEVLGHEDVVLTLTELRRWDPDAG RVTTIAQARQ
Sequences:
>Translated_170_residues MPKLHALELVPDDDGLRAVHGEWQRLRDAGLPSRLDHLRPTDQPHITVVSAPVLPDDAIDVARARLGSLLPVRARAAGLL LLGGARLTIARAVDIDDDVVRRALAVRVQVPDRQHVGWLPHVTLARRVERSDVQRAIEVLGHEDVVLTLTELRRWDPDAG RVTTIAQARQ >Mature_169_residues PKLHALELVPDDDGLRAVHGEWQRLRDAGLPSRLDHLRPTDQPHITVVSAPVLPDDAIDVARARLGSLLPVRARAAGLLL LGGARLTIARAVDIDDDVVRRALAVRVQVPDRQHVGWLPHVTLARRVERSDVQRAIEVLGHEDVVLTLTELRRWDPDAGR VTTIAQARQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18826; Mature: 18695
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLHALELVPDDDGLRAVHGEWQRLRDAGLPSRLDHLRPTDQPHITVVSAPVLPDDAID CCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCCHHHH VARARLGSLLPVRARAAGLLLLGGARLTIARAVDIDDDVVRRALAVRVQVPDRQHVGWLP HHHHHHCCCCCHHHHHCCEEEECCCEEEEEEECCCCHHHHHHHHHEEEECCCCCCCCCCC HVTLARRVERSDVQRAIEVLGHEDVVLTLTELRRWDPDAGRVTTIAQARQ HHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCCCEEHHCCCCC >Mature Secondary Structure PKLHALELVPDDDGLRAVHGEWQRLRDAGLPSRLDHLRPTDQPHITVVSAPVLPDDAID CCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCCHHHH VARARLGSLLPVRARAAGLLLLGGARLTIARAVDIDDDVVRRALAVRVQVPDRQHVGWLP HHHHHHCCCCCHHHHHCCEEEECCCEEEEEEECCCCHHHHHHHHHEEEECCCCCCCCCCC HVTLARRVERSDVQRAIEVLGHEDVVLTLTELRRWDPDAGRVTTIAQARQ HHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCCCEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA