| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is hsaD [H]
Identifier: 119716999
GI number: 119716999
Start: 2945909
End: 2946817
Strand: Reverse
Name: hsaD [H]
Synonym: Noca_2775
Alternate gene names: 119716999
Gene position: 2946817-2945909 (Counterclockwise)
Preceding gene: 119717000
Following gene: 119716998
Centisome position: 59.1
GC content: 72.28
Gene sequence:
>909_bases TTGGCTCTCACGAAGGAGAGCGCGCAGCGCTCCGCCAAGGCGAAGGACATCACGCTCAGCTACTACGAGGCCGGGACCGC GGCGACCTCCGCGACCGGGGCGCCGGTCGGCGGCGGGCTGCCGCTCGTGATGCTGCACGGCGGTGGGCCGGGAGCATCGG CGTGGTCGAACTTCGGCAGCGCGCTGCCGAGGTTCGCCGCGTCGTTCCGCACCCTGCTCGTCGACCAGCCCGGCTTCGGC GCCTCCGACAAGCCACCGGTCGTCGGCAACTACTACCGCCACTCCGCCGACCACGTGGTCGCGCTGCTCGACGAGCTCGG CATCGACCGGGTGCACCTGCTCGGCAACAGCCTCGGCGGCGGTACGGCGATGCGGCTCGCGCTCGACCACCCCGACCGCG TCGGGCGGCTGGTCCTGATGGGTCCCGGCGGGCTCTCGCTCAACCTGTTCCACGCCGACCCGACCGAGGGCGTGCAGCGG CTGATGGACTTCGGGGCCGAGCCGACGCGGGAGAACCTGCGGGCGTTCATCTCGACGATGGTGGTCGACCAGCGGCTGGT CACCGACGAGCTGGTCGAGGAGCGGTTCGCCGACGCGACCGCCCCCGGCGCCCAGGACGCGATGCGCTCGATGGGGATGT CCTTCTGGAACCCCGAGACGGCCGAGGACGGCATGCTCTGGCGCGAGGCGCACCGGCTGCGCAAGCACACCCTGCTGACC TGGGGCCGCGAGGACCGGGTCAACCCGCTCGACGGCGCGTTCGCCGCCCTCAAGCTGATCCCGAAGGCCCAGCTGCATGT CTTCGCGAACTGCGGGCACTGGGCGCAGGTCGAGGCCGCCGACGAGTTCGCCGAGGTCTCCATCGCGTTCCTGGCCCGGC ACGTCGAGCGCCCCGAGGGGGAGTCGTGA
Upstream 100 bases:
>100_bases CACGCCGGCCGGGTGCACGCCGCCAACGACCCCGAGCGGGCGCTGCAGATGTACGGCGCGCACGAGTTCGGGCACAAGAT CGACCCGGGGATGTACTGAG
Downstream 100 bases:
>100_bases CCATCGACATCAAGTCCATGGGCTACGTCCGCGTGGCCAGCACCGACCTGTCCCGGTGGGAGACCTTCGCGGGCAAGGTC CTCGGGCTCGCCGCCGGCCG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; HOPDA hydrolase; Meta-cleavage product hydrolase; MCP hydrolase [H]
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MALTKESAQRSAKAKDITLSYYEAGTAATSATGAPVGGGLPLVMLHGGGPGASAWSNFGSALPRFAASFRTLLVDQPGFG ASDKPPVVGNYYRHSADHVVALLDELGIDRVHLLGNSLGGGTAMRLALDHPDRVGRLVLMGPGGLSLNLFHADPTEGVQR LMDFGAEPTRENLRAFISTMVVDQRLVTDELVEERFADATAPGAQDAMRSMGMSFWNPETAEDGMLWREAHRLRKHTLLT WGREDRVNPLDGAFAALKLIPKAQLHVFANCGHWAQVEAADEFAEVSIAFLARHVERPEGES
Sequences:
>Translated_302_residues MALTKESAQRSAKAKDITLSYYEAGTAATSATGAPVGGGLPLVMLHGGGPGASAWSNFGSALPRFAASFRTLLVDQPGFG ASDKPPVVGNYYRHSADHVVALLDELGIDRVHLLGNSLGGGTAMRLALDHPDRVGRLVLMGPGGLSLNLFHADPTEGVQR LMDFGAEPTRENLRAFISTMVVDQRLVTDELVEERFADATAPGAQDAMRSMGMSFWNPETAEDGMLWREAHRLRKHTLLT WGREDRVNPLDGAFAALKLIPKAQLHVFANCGHWAQVEAADEFAEVSIAFLARHVERPEGES >Mature_301_residues ALTKESAQRSAKAKDITLSYYEAGTAATSATGAPVGGGLPLVMLHGGGPGASAWSNFGSALPRFAASFRTLLVDQPGFGA SDKPPVVGNYYRHSADHVVALLDELGIDRVHLLGNSLGGGTAMRLALDHPDRVGRLVLMGPGGLSLNLFHADPTEGVQRL MDFGAEPTRENLRAFISTMVVDQRLVTDELVEERFADATAPGAQDAMRSMGMSFWNPETAEDGMLWREAHRLRKHTLLTW GREDRVNPLDGAFAALKLIPKAQLHVFANCGHWAQVEAADEFAEVSIAFLARHVERPEGES
Specific function: Catalyzes the hydrolysis of a carbon-carbon bond in 4,5- 9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oic acid (4,9-DSHA) to yield 9,17-dioxo-1,2,3,4,10,19- hexanorandrostan-5-oic acid (DOHNAA) and 2-hydroxy-hexa-2,4- dienoic acid (HHD). Al
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. HsaD family [H]
Homologues:
Organism=Escherichia coli, GI87081721, Length=277, Percent_Identity=37.1841155234657, Blast_Score=177, Evalue=8e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.7.1.8 [H]
Molecular weight: Translated: 32509; Mature: 32378
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTKESAQRSAKAKDITLSYYEAGTAATSATGAPVGGGLPLVMLHGGGPGASAWSNFGS CCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH ALPRFAASFRTLLVDQPGFGASDKPPVVGNYYRHSADHVVALLDELGIDRVHLLGNSLGG HHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCC GTAMRLALDHPDRVGRLVLMGPGGLSLNLFHADPTEGVQRLMDFGAEPTRENLRAFISTM CEEEEEEECCCHHHCEEEEECCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHH VVDQRLVTDELVEERFADATAPGAQDAMRSMGMSFWNPETAEDGMLWREAHRLRKHTLLT HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHEE WGREDRVNPLDGAFAALKLIPKAQLHVFANCGHWAQVEAADEFAEVSIAFLARHVERPEG CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCC ES CC >Mature Secondary Structure ALTKESAQRSAKAKDITLSYYEAGTAATSATGAPVGGGLPLVMLHGGGPGASAWSNFGS CCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH ALPRFAASFRTLLVDQPGFGASDKPPVVGNYYRHSADHVVALLDELGIDRVHLLGNSLGG HHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCC GTAMRLALDHPDRVGRLVLMGPGGLSLNLFHADPTEGVQRLMDFGAEPTRENLRAFISTM CEEEEEEECCCHHHCEEEEECCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHH VVDQRLVTDELVEERFADATAPGAQDAMRSMGMSFWNPETAEDGMLWREAHRLRKHTLLT HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHEE WGREDRVNPLDGAFAALKLIPKAQLHVFANCGHWAQVEAADEFAEVSIAFLARHVERPEG CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCC ES CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA