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The map label for this gene is kstR2 [H]

Identifier: 119716989

GI number: 119716989

Start: 2936514

End: 2937146

Strand: Reverse

Name: kstR2 [H]

Synonym: Noca_2765

Alternate gene names: 119716989

Gene position: 2937146-2936514 (Counterclockwise)

Preceding gene: 119716990

Following gene: 119716988

Centisome position: 58.91

GC content: 67.93

Gene sequence:

>633_bases
ATGTCCGCCCAGAAGTCCGTGCAGAAGTCCGCGCAGAAGACGCCCGAGTCCGAGGCTCCGCACACCCGTCGTGCCCAGCT
GCTGCAGATCGCCGCCGGTCTGTTCGCCGAGAAGGGCTTCAAGAACACCACGGTGCGCGACATCGCCGACGCCGCCGGCA
TCCTCTCGGGCAGCCTGTACCACCACTTCGACTCCAAGGAGTCGATGGTCGACGAGATCCTGCGCACCTTCCAGGAGGAG
CTCTTCGGGCAGTACGACGACATCCTCGGCGGCGACCTCGACCCGCGGGCCAAGCTCGAGCAGGCCGTACTCGTCTCCTT
CGAGGCGATCGACAAGCACCGCGACGAGGTGGCGATCTTCCAGAACGAGGCGGCCTACCTGCTCACGTTCGACCGGTTCG
CCTACCTCGCCGACCGCAACCGGCAGTCCCAGCAGGTCTGGCTGACCCTGCTGCGCACCGGCGTCGACGCCGGGGTGCTG
CGCGACGACCTCGACCTCGAGCTGACCTACCGCTTCATCCGCGACACCGTCTGGGTCGCCGTGTCCTGGTACCGGCCCGG
CGGCCGGCGCACGCACACCGAGATCGCGCGGCAGTACCTGTCCATCCTGCTCGAAGGGATCGCCCGTGCCTGA

Upstream 100 bases:

>100_bases
CCGTGGGAGGTCGCCAACGTGATGGTGTTCCTGGCGAGCGACTACTCGTCGTACCTGACCGGCGAGGTCGTCTCCGTGAG
CAGTCAGCGAGGCTAGGGAC

Downstream 100 bases:

>100_bases
GGCCTACATCGTCGACGCCGTCCGCACGCCGGTCGGCAAGCGCGGGGGAGCGCTGGCTGGCGTCCACTCCGCCGACCTCG
GCGCGCACTCGATCGCCGCC

Product: regulatory protein TetR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSAQKSVQKSAQKTPESEAPHTRRAQLLQIAAGLFAEKGFKNTTVRDIADAAGILSGSLYHHFDSKESMVDEILRTFQEE
LFGQYDDILGGDLDPRAKLEQAVLVSFEAIDKHRDEVAIFQNEAAYLLTFDRFAYLADRNRQSQQVWLTLLRTGVDAGVL
RDDLDLELTYRFIRDTVWVAVSWYRPGGRRTHTEIARQYLSILLEGIARA

Sequences:

>Translated_210_residues
MSAQKSVQKSAQKTPESEAPHTRRAQLLQIAAGLFAEKGFKNTTVRDIADAAGILSGSLYHHFDSKESMVDEILRTFQEE
LFGQYDDILGGDLDPRAKLEQAVLVSFEAIDKHRDEVAIFQNEAAYLLTFDRFAYLADRNRQSQQVWLTLLRTGVDAGVL
RDDLDLELTYRFIRDTVWVAVSWYRPGGRRTHTEIARQYLSILLEGIARA
>Mature_209_residues
SAQKSVQKSAQKTPESEAPHTRRAQLLQIAAGLFAEKGFKNTTVRDIADAAGILSGSLYHHFDSKESMVDEILRTFQEEL
FGQYDDILGGDLDPRAKLEQAVLVSFEAIDKHRDEVAIFQNEAAYLLTFDRFAYLADRNRQSQQVWLTLLRTGVDAGVLR
DDLDLELTYRFIRDTVWVAVSWYRPGGRRTHTEIARQYLSILLEGIARA

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23864; Mature: 23733

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQKSVQKSAQKTPESEAPHTRRAQLLQIAAGLFAEKGFKNTTVRDIADAAGILSGSLY
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHH
HHFDSKESMVDEILRTFQEELFGQYDDILGGDLDPRAKLEQAVLVSFEAIDKHRDEVAIF
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
QNEAAYLLTFDRFAYLADRNRQSQQVWLTLLRTGVDAGVLRDDLDLELTYRFIRDTVWVA
ECCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHE
VSWYRPGGRRTHTEIARQYLSILLEGIARA
EEEECCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAQKSVQKSAQKTPESEAPHTRRAQLLQIAAGLFAEKGFKNTTVRDIADAAGILSGSLY
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHH
HHFDSKESMVDEILRTFQEELFGQYDDILGGDLDPRAKLEQAVLVSFEAIDKHRDEVAIF
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
QNEAAYLLTFDRFAYLADRNRQSQQVWLTLLRTGVDAGVLRDDLDLELTYRFIRDTVWVA
ECCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHE
VSWYRPGGRRTHTEIARQYLSILLEGIARA
EEEECCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA