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The map label for this gene is ytfL [C]

Identifier: 119716944

GI number: 119716944

Start: 2890680

End: 2891729

Strand: Reverse

Name: ytfL [C]

Synonym: Noca_2719

Alternate gene names: 119716944

Gene position: 2891729-2890680 (Counterclockwise)

Preceding gene: 119716945

Following gene: 119716943

Centisome position: 58.0

GC content: 72.67

Gene sequence:

>1050_bases
GTGAACAGCCTGACCGCCATCGTGCTCGCCGTCTTCCTCCTGCTCGGCAACGCGTTCTTCGTGGGCGCGGAGTTCGCGTT
GGTCTCCGCGCGCCGCACGCAGCTCGAGCCGCGCGCCGAGGCGGGCTCGCGGATGGCGCGGACCACGATCAAGGCGATGG
AGAACATCTCCCTGGTGATCGGCGTCAACCAGCTCGGCATCACCGTCTGCTCGCTGGTGCTCGGTGCGGTCGGCGAGCCC
GCGGTCGCCCACCTCGTGGAGCCGGTCCTGCACGCGGTGAACGTGCCGGAGGGCTTCGTGCACCCGGTGTCGTTCGTGCT
CGCCCTGTCGCTGGTCGTCTACCTGCACGTGGTGCTGGGGGAGATGATCCCGAAGAACATCGCCCTGGCGGGGCCGGACC
GGGCCGCGCTCGTGCTGGGCCCGCCGATCTGGGGGATCGTGACCGTGCTCCGGCCGGTCGTCGTGGTCATCAACGCGATC
GCGGCCGGGGTGCTGCGCCTGATGGGTGCCCGGCTGACCAGCGAGGTGAGCTCGACGTACACCCGCGAGGAGGTCGCCGC
GCTGGTCGAGCAGTCACGCGGCGAGGGCCTCCTCGAGGCCGACGAGTACGACCGCCTCGCCGGGGCGCTGGGGTTCACCG
AGAAGACCGTCGGTGCCGTCCTGATGCCGCCGGACTCGCTCACCACGGTGCCGCGGGGCTCGACCGGCGCCGAGGTCGAG
GCGCTGTGCGCGTCGACCGGCTTCAGCCGGTTCCCGGTCGTGGGGGAGGACGGCGGGCTGCTCGGCTACCTGCACATCAA
GGACGTCCTCGAGCCGGACGAGGCCCGCCGGGCCCGGCCGGTCGAGGACAAGTGGATCCGGCCGTTCGCCCCGGTCAGCG
CCGACGAGCCGCTGCACGGTGCCCTCGAGACCCTGCAGCGCCGGGGCGCGCACATGGCGCGGGTGGTCGACGGCGGCGGG
CGGACCCTCGGGCTGGCCACCCTCGAGGACGTCATCGAGGAGCTCGTGGGCGAGATCCGCGACGCCGCGCACCTGGAGGA
CCACCTCTGA

Upstream 100 bases:

>100_bases
GCGAGCAGCTCGCCGTCCTCACCGTGGAGCGGATGGACGGGCTGCGGATCGACCGGCTGACGCTGCGGCTCCTCGACACC
CCGATCGGGGGGGCGGAGTC

Downstream 100 bases:

>100_bases
CCGGGAGCGGCTGCCACCGATCCGGGGTCCCGGCCGATAGGCTTGGCGCGGCAGCACACCCCGGGAGAGCAGACAGGCGA
GCAGTGGCGGACGACTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MNSLTAIVLAVFLLLGNAFFVGAEFALVSARRTQLEPRAEAGSRMARTTIKAMENISLVIGVNQLGITVCSLVLGAVGEP
AVAHLVEPVLHAVNVPEGFVHPVSFVLALSLVVYLHVVLGEMIPKNIALAGPDRAALVLGPPIWGIVTVLRPVVVVINAI
AAGVLRLMGARLTSEVSSTYTREEVAALVEQSRGEGLLEADEYDRLAGALGFTEKTVGAVLMPPDSLTTVPRGSTGAEVE
ALCASTGFSRFPVVGEDGGLLGYLHIKDVLEPDEARRARPVEDKWIRPFAPVSADEPLHGALETLQRRGAHMARVVDGGG
RTLGLATLEDVIEELVGEIRDAAHLEDHL

Sequences:

>Translated_349_residues
MNSLTAIVLAVFLLLGNAFFVGAEFALVSARRTQLEPRAEAGSRMARTTIKAMENISLVIGVNQLGITVCSLVLGAVGEP
AVAHLVEPVLHAVNVPEGFVHPVSFVLALSLVVYLHVVLGEMIPKNIALAGPDRAALVLGPPIWGIVTVLRPVVVVINAI
AAGVLRLMGARLTSEVSSTYTREEVAALVEQSRGEGLLEADEYDRLAGALGFTEKTVGAVLMPPDSLTTVPRGSTGAEVE
ALCASTGFSRFPVVGEDGGLLGYLHIKDVLEPDEARRARPVEDKWIRPFAPVSADEPLHGALETLQRRGAHMARVVDGGG
RTLGLATLEDVIEELVGEIRDAAHLEDHL
>Mature_349_residues
MNSLTAIVLAVFLLLGNAFFVGAEFALVSARRTQLEPRAEAGSRMARTTIKAMENISLVIGVNQLGITVCSLVLGAVGEP
AVAHLVEPVLHAVNVPEGFVHPVSFVLALSLVVYLHVVLGEMIPKNIALAGPDRAALVLGPPIWGIVTVLRPVVVVINAI
AAGVLRLMGARLTSEVSSTYTREEVAALVEQSRGEGLLEADEYDRLAGALGFTEKTVGAVLMPPDSLTTVPRGSTGAEVE
ALCASTGFSRFPVVGEDGGLLGYLHIKDVLEPDEARRARPVEDKWIRPFAPVSADEPLHGALETLQRRGAHMARVVDGGG
RTLGLATLEDVIEELVGEIRDAAHLEDHL

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=325, Percent_Identity=30.7692307692308, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI40068055, Length=352, Percent_Identity=23.2954545454545, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI40068053, Length=352, Percent_Identity=23.2954545454545, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1790664, Length=341, Percent_Identity=24.0469208211144, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI145693175, Length=334, Percent_Identity=21.8562874251497, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1786879, Length=158, Percent_Identity=29.746835443038, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 36949; Mature: 36949

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLTAIVLAVFLLLGNAFFVGAEFALVSARRTQLEPRAEAGSRMARTTIKAMENISLVI
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEE
GVNQLGITVCSLVLGAVGEPAVAHLVEPVLHAVNVPEGFVHPVSFVLALSLVVYLHVVLG
ECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EMIPKNIALAGPDRAALVLGPPIWGIVTVLRPVVVVINAIAAGVLRLMGARLTSEVSSTY
HHCCCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TREEVAALVEQSRGEGLLEADEYDRLAGALGFTEKTVGAVLMPPDSLTTVPRGSTGAEVE
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHCCEEEECCCCCCCCCCCCCCCHHH
ALCASTGFSRFPVVGEDGGLLGYLHIKDVLEPDEARRARPVEDKWIRPFAPVSADEPLHG
HHHHHCCCCCCCEECCCCCEEEEEEHHHHCCCCHHHCCCCCCHHCCCCCCCCCCCCCHHH
ALETLQRRGAHMARVVDGGGRTLGLATLEDVIEELVGEIRDAAHLEDHL
HHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSLTAIVLAVFLLLGNAFFVGAEFALVSARRTQLEPRAEAGSRMARTTIKAMENISLVI
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEE
GVNQLGITVCSLVLGAVGEPAVAHLVEPVLHAVNVPEGFVHPVSFVLALSLVVYLHVVLG
ECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EMIPKNIALAGPDRAALVLGPPIWGIVTVLRPVVVVINAIAAGVLRLMGARLTSEVSSTY
HHCCCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TREEVAALVEQSRGEGLLEADEYDRLAGALGFTEKTVGAVLMPPDSLTTVPRGSTGAEVE
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHCCEEEECCCCCCCCCCCCCCCHHH
ALCASTGFSRFPVVGEDGGLLGYLHIKDVLEPDEARRARPVEDKWIRPFAPVSADEPLHG
HHHHHCCCCCCCEECCCCCEEEEEEHHHHCCCCHHHCCCCCCHHCCCCCCCCCCCCCHHH
ALETLQRRGAHMARVVDGGGRTLGLATLEDVIEELVGEIRDAAHLEDHL
HHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]