| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is pgsA1 [H]
Identifier: 119716943
GI number: 119716943
Start: 2889994
End: 2890596
Strand: Reverse
Name: pgsA1 [H]
Synonym: Noca_2718
Alternate gene names: 119716943
Gene position: 2890596-2889994 (Counterclockwise)
Preceding gene: 119716944
Following gene: 119716942
Centisome position: 57.98
GC content: 72.47
Gene sequence:
>603_bases GTGGCGGACGACTCGACGCGCAACCGCGTGTGGACGCTTCCCAACCTGCTCAGCATGATCCGGCTGGCGGGCGTCCCGGT CTTCCTCTGGCTGGTGCTGGGCCCGGAGGCGGACGGCTGGGCACTGGCGCTGCTGGCGGTCTCCGGCATCACCGACTTCC TCGACGGCTACCTCGCGCGCCGGCTGGGGCAGACCTCGACGCTGGGCCAGGTGCTGGACCCGGTCGCCGACCGGCTCTAC ATCCTGGCCGTCGTCGTGGGCCTCGCGCTGCGCGACGTGATCCCCTGGTGGGCGGCGCTCTCGCTGCCGCTGCGCGACCT CCTGCTCTGGGGGCTGGTGCCGCTGCTGCGGACCCGTGGCTACAGCGCGCTGCCGGTGCACTTCCTGGGCAAGGCCGCGA CCTTCAACCTGCTCTACGCCTTCCCGCTGCTGCTGCTCGGTGACGGCGACGGGACGGTCGCGACCCTCGCGAACGTGTTC GGCTGGGCGTTCGCCCTGTGGGGGATCGGGCTCTACTGGTGGGCCGGCATCCTCTACGCCTGGCAGGTGCGCACCCTGCT GGCCACCACCGAGAGGCGGACGGCGGCGGTCCCCGATGCCTGA
Upstream 100 bases:
>100_bases TGGAGGACCACCTCTGACCGGGAGCGGCTGCCACCGATCCGGGGTCCCGGCCGATAGGCTTGGCGCGGCAGCACACCCCG GGAGAGCAGACAGGCGAGCA
Downstream 100 bases:
>100_bases CTCCCGGACCACGACGGCCGACCGGGTCAGCACGCCGCTGCTGACGCTGATCACCCAGCAGTCCCTCGACGAGGACTACC GCCACGTCGCGGAGCGCCGC
Product: CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MADDSTRNRVWTLPNLLSMIRLAGVPVFLWLVLGPEADGWALALLAVSGITDFLDGYLARRLGQTSTLGQVLDPVADRLY ILAVVVGLALRDVIPWWAALSLPLRDLLLWGLVPLLRTRGYSALPVHFLGKAATFNLLYAFPLLLLGDGDGTVATLANVF GWAFALWGIGLYWWAGILYAWQVRTLLATTERRTAAVPDA
Sequences:
>Translated_200_residues MADDSTRNRVWTLPNLLSMIRLAGVPVFLWLVLGPEADGWALALLAVSGITDFLDGYLARRLGQTSTLGQVLDPVADRLY ILAVVVGLALRDVIPWWAALSLPLRDLLLWGLVPLLRTRGYSALPVHFLGKAATFNLLYAFPLLLLGDGDGTVATLANVF GWAFALWGIGLYWWAGILYAWQVRTLLATTERRTAAVPDA >Mature_199_residues ADDSTRNRVWTLPNLLSMIRLAGVPVFLWLVLGPEADGWALALLAVSGITDFLDGYLARRLGQTSTLGQVLDPVADRLYI LAVVVGLALRDVIPWWAALSLPLRDLLLWGLVPLLRTRGYSALPVHFLGKAATFNLLYAFPLLLLGDGDGTVATLANVFG WAFALWGIGLYWWAGILYAWQVRTLLATTERRTAAVPDA
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Homo sapiens, GI188536108, Length=110, Percent_Identity=40, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI10092647, Length=131, Percent_Identity=38.9312977099237, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71984838, Length=110, Percent_Identity=37.2727272727273, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71984834, Length=110, Percent_Identity=37.2727272727273, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320059, Length=130, Percent_Identity=33.0769230769231, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI24650130, Length=122, Percent_Identity=34.4262295081967, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24650126, Length=122, Percent_Identity=34.4262295081967, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24650128, Length=122, Percent_Identity=34.4262295081967, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21914; Mature: 21783
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDSTRNRVWTLPNLLSMIRLAGVPVFLWLVLGPEADGWALALLAVSGITDFLDGYLAR CCCCCCCCEEECHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RLGQTSTLGQVLDPVADRLYILAVVVGLALRDVIPWWAALSLPLRDLLLWGLVPLLRTRG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC YSALPVHFLGKAATFNLLYAFPLLLLGDGDGTVATLANVFGWAFALWGIGLYWWAGILYA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQVRTLLATTERRTAAVPDA HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ADDSTRNRVWTLPNLLSMIRLAGVPVFLWLVLGPEADGWALALLAVSGITDFLDGYLAR CCCCCCCEEECHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RLGQTSTLGQVLDPVADRLYILAVVVGLALRDVIPWWAALSLPLRDLLLWGLVPLLRTRG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC YSALPVHFLGKAATFNLLYAFPLLLLGDGDGTVATLANVFGWAFALWGIGLYWWAGILYA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQVRTLLATTERRTAAVPDA HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]