Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is pheT [H]

Identifier: 119716692

GI number: 119716692

Start: 2625448

End: 2627931

Strand: Direct

Name: pheT [H]

Synonym: Noca_2466

Alternate gene names: 119716692

Gene position: 2625448-2627931 (Clockwise)

Preceding gene: 119716691

Following gene: 119716694

Centisome position: 52.66

GC content: 73.99

Gene sequence:

>2484_bases
ATGAAGACCCCCGTCTCCTGGATCCGCGAGCACGTCGACCTCCCCGACGGTGTCACCACCGAGGACCTGACGCGCCGGCT
GACTGCCCTGGGCCTCAAGCTCGAGGCGATCGAGAGCGCCGGCGCCGACATCACCGGGCCGCTCGTCATCGGCCGGGTGC
TGACGATGCAGCCGGAGCCGCAGAAGAACGGCAAGACGATCAACTGGTGCACGGTGGACGTCGGCGCCGCCAACGGGACC
GGAGAGCCCCAGGGGATCGTCTGCGGCGCGCACAACTTCGCACCGGGCGACCTCGTGGTCGTCGTGCTGCCGGGAGGGGT
ACTCGCCGGCGGGTTCGAGATCTCCGCCCGCAAGACCTACGGCCACGTCTCGGCCGGCATGATCTGCTCGGCCCGCGAGC
TCGGCATCGGCGAGGACCACGACGGCATCATCGTGCTGCCCCCCGACGCCGGTGAGCCGGGCGAGGGCGCGTTCGACGTC
CTCGGGCTCGGCGAGGAGGTCATCGAGTTCGAGATCAACCCGGACCGTGCCTACGCACTGTCGGTGCGCGGCGTCGCCCG
CGAGGCCGCGCTCGCGTACGGCGCGCCGTACCGGGACCCGGCCGACCGGCCCGTCCCGGCCCCGAACCGCGACGGCTACC
CGGTCGTCATCGACGACCCCGACGGCTGCCCGATGTTCGTGGCCCGCACCGTCTCAGGGTTCGACCCGACCGCCCCGACA
CCCGGCTGGATGGCGCGCCGCCTCCAGCAGTGCGGCATGCGGCCCATCTCGCTGGCCGTCGACGTCACCAACTACGTGAT
GCTCGAGACCGGTCGTCCGATCCACGGCTACGACGCCGACAAGCTCCAAGGCCCGATCCGGGTCCGCCGGGCCCGGGCCG
GCGAGCGGCTCACCACCCTGGACGGGGCCGACCGGGAGCTGTCCACCGAGGACCTGGTCGTCACCGACGACTCCGGGATC
ATCGGCCTGGGCGGGGTGATGGGCGGCGAGACGACCGAGCTGTCCGAGTCGACCACGACCGTGCTCGTCGAGGCTGCGCA
CTGGGACGCCGTCTCGATGTTCCGCACCGGCAAGCGGCACAAGATCAGCTCCGAGGCCGGCAAGCGCAACGAGCGCGGAG
TCGACCCGGTGATCACCCCCGCCGCCGCGGACCGCGTGGTCGAGCTGCTCACGACGTACGGCGGGGGCACCGCAGAGCCG
GGCGTCACGGTCGTCGGCACCGCTCCGGCGCGGCCCACGATCACCATCGGCTACGACCTGCCGGCGCGGGTCACCGGCAT
GGCGATCGACGCCGCGACCACCGTCACGAACCTCGAGGCCGTCGGCTGCGCGCTGGTCAAGGCGGACACGACCCTGACCG
CGACCCCGTCGCCGTGGCGACCCGACCTCAACGACCCCTTCGACCTGGTCGAGGAGGTGGCCCGGATCGTCGGCTACGAC
CAGGTGCCCTCGGTGCTGCCCCGGGAGGCCGCCGGCCGCGGGCTGACCCGCGAGCAGCGGCTGCGCCGGCGCGTGGGCCG
CACCCTCGCCGGCGCCGGCTGCGTCGAGGTGATCAGCTTCCCGTTCATCGGCGACGCCGCGTTCGACGCCCTCGGGCTCG
AGGCCGACGACCCGCGGCGGCACACGGTGCGGCTCGCGAACCCGCTCTCCAGCGAGGAGCCGTCGTACACCACGACGCTG
CTCCCGGGCCTGCTCCGGGCGGCCGCGCGCAACCTCGGCCGCGGTGCGTCCGGGGTGTCGCTCTTCGAGACCGGCACCGT
CGCGTTCCCCGTCGACCGCGGTCCCGCGCCGATCTACGGCGTGGACTGGCGCCCGACCGCCGACGAGGTGGCCAAGCTGG
ACGAGGCGCTCCCCGAGCAGCCGCTGCACCTCGTCGTCGTCCTCGCCGGTGAGCGCGAGCGGGCCGGCTGGTGGGGCGCG
GGACGGGAGTCCGGCTGGTCGGACGCCATCGCCCTGGTCCGCCGGCTCGGCACCGAGCTCGGCGTCGCGGTGGACGTCGA
CGGCGCCACCCGGATGCCCTGGCACCCGGGCCGGTGCGCGCAGGTCAGCGTCAACGGTGAGCTGCTCGGCCACGCGGGTG
AGCTGCACCCCAAGGTCTGCCAGTCCTTCGGCCTCCCACCGCGCAGCGCGGCCGTCGAGATCGACCTGGACGCGCTGATG
CGGCACGCCCGCGACGTCACACCCGGGCCCGACTTCTCGACGTACCCGTTGGCGAAGGAGGACGTCGCCCTGGTCGTGGA
CCAGGCTGTGACCGCGGCCGAGGTCGGCGCCGCGCTGCGGGAGGGCGCGGGCGAGCTGCTCGAGTCGATCCGGCTGTTCG
ACCTCTACACCGGGGAGCAGGTCGGTGCCGGCCGCAAGTCGCTGGCCTTCGCCCTGCGCTTCCGGGCGCCCGACCGGACG
CTCACCGAGGAGGAGACGGCGGCCGCCCGCGACGCAGCCGTCGCGCTGGCCGCCGAACGCACCGGTGCCGTCCAGCGGAG
CTGA

Upstream 100 bases:

>100_bases
CGCACCCTGATGTTCCGCCACGGCATCGAGGACCTGCGCGAGCTGTTCGAGGGCGACGTCCGGTTCACCACGGCCTTCGG
AACGGAGCTCTGAGCCAGCC

Downstream 100 bases:

>100_bases
CCGACCGGGGGCCCCGTCCTGAGGTCGCGCATCTGCGGCATCCAGGCTGGTCCACCGCCTCAGTCGATCGGCTGGTCCAC
GGCCCGGCGGAACCGGTCGT

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]

Number of amino acids: Translated: 827; Mature: 827

Protein sequence:

>827_residues
MKTPVSWIREHVDLPDGVTTEDLTRRLTALGLKLEAIESAGADITGPLVIGRVLTMQPEPQKNGKTINWCTVDVGAANGT
GEPQGIVCGAHNFAPGDLVVVVLPGGVLAGGFEISARKTYGHVSAGMICSARELGIGEDHDGIIVLPPDAGEPGEGAFDV
LGLGEEVIEFEINPDRAYALSVRGVAREAALAYGAPYRDPADRPVPAPNRDGYPVVIDDPDGCPMFVARTVSGFDPTAPT
PGWMARRLQQCGMRPISLAVDVTNYVMLETGRPIHGYDADKLQGPIRVRRARAGERLTTLDGADRELSTEDLVVTDDSGI
IGLGGVMGGETTELSESTTTVLVEAAHWDAVSMFRTGKRHKISSEAGKRNERGVDPVITPAAADRVVELLTTYGGGTAEP
GVTVVGTAPARPTITIGYDLPARVTGMAIDAATTVTNLEAVGCALVKADTTLTATPSPWRPDLNDPFDLVEEVARIVGYD
QVPSVLPREAAGRGLTREQRLRRRVGRTLAGAGCVEVISFPFIGDAAFDALGLEADDPRRHTVRLANPLSSEEPSYTTTL
LPGLLRAAARNLGRGASGVSLFETGTVAFPVDRGPAPIYGVDWRPTADEVAKLDEALPEQPLHLVVVLAGERERAGWWGA
GRESGWSDAIALVRRLGTELGVAVDVDGATRMPWHPGRCAQVSVNGELLGHAGELHPKVCQSFGLPPRSAAVEIDLDALM
RHARDVTPGPDFSTYPLAKEDVALVVDQAVTAAEVGAALREGAGELLESIRLFDLYTGEQVGAGRKSLAFALRFRAPDRT
LTEEETAAARDAAVALAAERTGAVQRS

Sequences:

>Translated_827_residues
MKTPVSWIREHVDLPDGVTTEDLTRRLTALGLKLEAIESAGADITGPLVIGRVLTMQPEPQKNGKTINWCTVDVGAANGT
GEPQGIVCGAHNFAPGDLVVVVLPGGVLAGGFEISARKTYGHVSAGMICSARELGIGEDHDGIIVLPPDAGEPGEGAFDV
LGLGEEVIEFEINPDRAYALSVRGVAREAALAYGAPYRDPADRPVPAPNRDGYPVVIDDPDGCPMFVARTVSGFDPTAPT
PGWMARRLQQCGMRPISLAVDVTNYVMLETGRPIHGYDADKLQGPIRVRRARAGERLTTLDGADRELSTEDLVVTDDSGI
IGLGGVMGGETTELSESTTTVLVEAAHWDAVSMFRTGKRHKISSEAGKRNERGVDPVITPAAADRVVELLTTYGGGTAEP
GVTVVGTAPARPTITIGYDLPARVTGMAIDAATTVTNLEAVGCALVKADTTLTATPSPWRPDLNDPFDLVEEVARIVGYD
QVPSVLPREAAGRGLTREQRLRRRVGRTLAGAGCVEVISFPFIGDAAFDALGLEADDPRRHTVRLANPLSSEEPSYTTTL
LPGLLRAAARNLGRGASGVSLFETGTVAFPVDRGPAPIYGVDWRPTADEVAKLDEALPEQPLHLVVVLAGERERAGWWGA
GRESGWSDAIALVRRLGTELGVAVDVDGATRMPWHPGRCAQVSVNGELLGHAGELHPKVCQSFGLPPRSAAVEIDLDALM
RHARDVTPGPDFSTYPLAKEDVALVVDQAVTAAEVGAALREGAGELLESIRLFDLYTGEQVGAGRKSLAFALRFRAPDRT
LTEEETAAARDAAVALAAERTGAVQRS
>Mature_827_residues
MKTPVSWIREHVDLPDGVTTEDLTRRLTALGLKLEAIESAGADITGPLVIGRVLTMQPEPQKNGKTINWCTVDVGAANGT
GEPQGIVCGAHNFAPGDLVVVVLPGGVLAGGFEISARKTYGHVSAGMICSARELGIGEDHDGIIVLPPDAGEPGEGAFDV
LGLGEEVIEFEINPDRAYALSVRGVAREAALAYGAPYRDPADRPVPAPNRDGYPVVIDDPDGCPMFVARTVSGFDPTAPT
PGWMARRLQQCGMRPISLAVDVTNYVMLETGRPIHGYDADKLQGPIRVRRARAGERLTTLDGADRELSTEDLVVTDDSGI
IGLGGVMGGETTELSESTTTVLVEAAHWDAVSMFRTGKRHKISSEAGKRNERGVDPVITPAAADRVVELLTTYGGGTAEP
GVTVVGTAPARPTITIGYDLPARVTGMAIDAATTVTNLEAVGCALVKADTTLTATPSPWRPDLNDPFDLVEEVARIVGYD
QVPSVLPREAAGRGLTREQRLRRRVGRTLAGAGCVEVISFPFIGDAAFDALGLEADDPRRHTVRLANPLSSEEPSYTTTL
LPGLLRAAARNLGRGASGVSLFETGTVAFPVDRGPAPIYGVDWRPTADEVAKLDEALPEQPLHLVVVLAGERERAGWWGA
GRESGWSDAIALVRRLGTELGVAVDVDGATRMPWHPGRCAQVSVNGELLGHAGELHPKVCQSFGLPPRSAAVEIDLDALM
RHARDVTPGPDFSTYPLAKEDVALVVDQAVTAAEVGAALREGAGELLESIRLFDLYTGEQVGAGRKSLAFALRFRAPDRT
LTEEETAAARDAAVALAAERTGAVQRS

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788006, Length=832, Percent_Identity=32.6923076923077, Blast_Score=385, Evalue=1e-108,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547 [H]

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 87425; Mature: 87425

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50886 TRBD ; PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPVSWIREHVDLPDGVTTEDLTRRLTALGLKLEAIESAGADITGPLVIGRVLTMQPEP
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEHHHHCCCCCCCHHHCCEEEECCCCC
QKNGKTINWCTVDVGAANGTGEPQGIVCGAHNFAPGDLVVVVLPGGVLAGGFEISARKTY
CCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEECCCEEECCEEEEEECCC
GHVSAGMICSARELGIGEDHDGIIVLPPDAGEPGEGAFDVLGLGEEVIEFEINPDRAYAL
CCCCCCEEEEHHHCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCCEEEE
SVRGVAREAALAYGAPYRDPADRPVPAPNRDGYPVVIDDPDGCPMFVARTVSGFDPTAPT
EEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCC
PGWMARRLQQCGMRPISLAVDVTNYVMLETGRPIHGYDADKLQGPIRVRRARAGERLTTL
HHHHHHHHHHHCCCEEEEEEEEEEEEEEECCCCCCCCCHHHHCCCHHHHHHHCCCEEEEC
DGADRELSTEDLVVTDDSGIIGLGGVMGGETTELSESTTTVLVEAAHWDAVSMFRTGKRH
CCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCC
KISSEAGKRNERGVDPVITPAAADRVVELLTTYGGGTAEPGVTVVGTAPARPTITIGYDL
CCCHHHCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCC
PARVTGMAIDAATTVTNLEAVGCALVKADTTLTATPSPWRPDLNDPFDLVEEVARIVGYD
CCCEEEEEEEHHHHHHHHHHHCEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
QVPSVLPREAAGRGLTREQRLRRRVGRTLAGAGCVEVISFPFIGDAAFDALGLEADDPRR
CCCCCCCHHHHCCCCCHHHHHHHHHCHHHCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCC
HTVRLANPLSSEEPSYTTTLLPGLLRAAARNLGRGASGVSLFETGTVAFPVDRGPAPIYG
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCCEEE
VDWRPTADEVAKLDEALPEQPLHLVVVLAGERERAGWWGAGRESGWSDAIALVRRLGTEL
CCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCHHC
GVAVDVDGATRMPWHPGRCAQVSVNGELLGHAGELHPKVCQSFGLPPRSAAVEIDLDALM
CEEEECCCCCCCCCCCCCEEEEEECCEEECCCCCCCHHHHHHCCCCCCCCEEEEEHHHHH
RHARDVTPGPDFSTYPLAKEDVALVVDQAVTAAEVGAALREGAGELLESIRLFDLYTGEQ
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
VGAGRKSLAFALRFRAPDRTLTEEETAAARDAAVALAAERTGAVQRS
CCCCCHHEEEEEEECCCCCCCCCHHHHHHHHHHEEEEHHHCCCCCCC
>Mature Secondary Structure
MKTPVSWIREHVDLPDGVTTEDLTRRLTALGLKLEAIESAGADITGPLVIGRVLTMQPEP
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEHHHHCCCCCCCHHHCCEEEECCCCC
QKNGKTINWCTVDVGAANGTGEPQGIVCGAHNFAPGDLVVVVLPGGVLAGGFEISARKTY
CCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEECCCEEECCEEEEEECCC
GHVSAGMICSARELGIGEDHDGIIVLPPDAGEPGEGAFDVLGLGEEVIEFEINPDRAYAL
CCCCCCEEEEHHHCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCCEEEE
SVRGVAREAALAYGAPYRDPADRPVPAPNRDGYPVVIDDPDGCPMFVARTVSGFDPTAPT
EEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCC
PGWMARRLQQCGMRPISLAVDVTNYVMLETGRPIHGYDADKLQGPIRVRRARAGERLTTL
HHHHHHHHHHHCCCEEEEEEEEEEEEEEECCCCCCCCCHHHHCCCHHHHHHHCCCEEEEC
DGADRELSTEDLVVTDDSGIIGLGGVMGGETTELSESTTTVLVEAAHWDAVSMFRTGKRH
CCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCC
KISSEAGKRNERGVDPVITPAAADRVVELLTTYGGGTAEPGVTVVGTAPARPTITIGYDL
CCCHHHCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCC
PARVTGMAIDAATTVTNLEAVGCALVKADTTLTATPSPWRPDLNDPFDLVEEVARIVGYD
CCCEEEEEEEHHHHHHHHHHHCEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
QVPSVLPREAAGRGLTREQRLRRRVGRTLAGAGCVEVISFPFIGDAAFDALGLEADDPRR
CCCCCCCHHHHCCCCCHHHHHHHHHCHHHCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCC
HTVRLANPLSSEEPSYTTTLLPGLLRAAARNLGRGASGVSLFETGTVAFPVDRGPAPIYG
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCCEEE
VDWRPTADEVAKLDEALPEQPLHLVVVLAGERERAGWWGAGRESGWSDAIALVRRLGTEL
CCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCHHC
GVAVDVDGATRMPWHPGRCAQVSVNGELLGHAGELHPKVCQSFGLPPRSAAVEIDLDALM
CEEEECCCCCCCCCCCCCEEEEEECCEEECCCCCCCHHHHHHCCCCCCCCEEEEEHHHHH
RHARDVTPGPDFSTYPLAKEDVALVVDQAVTAAEVGAALREGAGELLESIRLFDLYTGEQ
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
VGAGRKSLAFALRFRAPDRTLTEEETAAARDAAVALAAERTGAVQRS
CCCCCHHEEEEEEECCCCCCCCCHHHHHHHHHHEEEEHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]