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The map label for this gene is 119716671

Identifier: 119716671

GI number: 119716671

Start: 2607448

End: 2608428

Strand: Direct

Name: 119716671

Synonym: Noca_2445

Alternate gene names: NA

Gene position: 2607448-2608428 (Clockwise)

Preceding gene: 119716670

Following gene: 119716672

Centisome position: 52.3

GC content: 71.05

Gene sequence:

>981_bases
ATGCCCGCCTCGAAGACGCCCGCGGTCGAGATCGAGGTCGACGACCGGGTCGTGCGGATCAGCAACCCCGACCGGGTGTA
CTTCCCCGACAGCGGAGCGACCAAGCTCGACCTGGTCGAGTACTACCTCGCGGTCGGTCCGGGCATCGTCAACGCCCTGT
TCGAGCGGCCGTGCATGCTGCACCGCTTCCCGAAGGGCCTGGCGGGGGAGAAGGTGCACCAGAAACGGCTGCCGAAGGGC
GCACCGCCCTGGGTGGAGACGGTCCGCCTGCACTTCCCGCGCTGGAACCGTACGGCGGACGAGCTCTGCGTCACCGAGCT
GGGCAGCGTGATCTGGGCGGTGCAGATGTCCACGGTCGAGTTCCATCCCTGGAACAGCCGCCGCGAGGACACCGAGCGGC
CGGACGAGTGGCGCATCGACCTCGACCCCGGCCCGGAGTGCTCCTACGACCGGGTCCGGCGGGTGGCCCACGTCGCCCAC
GAGGTCCTCGACGAGCTCGGCGTCGTCGGCTTCCCGAAGACCAGTGGCAGCAAGGGACTGCACGTGTACGTCCGGATCCG
CCCGGACCATGGGTTCAAGGAGGTACGCCGGGCCGCGCTCGCCTTCGCCCGCGAGGTCGAGCGCCGGGCGCCCGAGGACG
TGGACCTGACCTGGTGGCGCAAGGACCGGGACCCCGCGACGGTCTTCGTCGACTACAACCAGAACGCCCGTGACCACACC
ATCGCGGCGGCGTACTCCGTCCGCGGCCTCCCCGACGCCCGGGTCTCCACGCCCATCCGGTGGGACGAGGTCGACGACGC
CGACCCGCGTGACTTCACGATCTTCACGGTGCCCGAGCGGTTCGCCCGGCTCGGCGACCTGCACACCGATATCGACGACG
GCGGCGGCCGGGGGCCGTTCGACATCGCGTCGCTCCTGGAGTGGGCCGACCGCGACGAGCGCGACGGCGCCGCCGGTCCC
GACGACGAGCAGTCCGAATAG

Upstream 100 bases:

>100_bases
GCCGGTCCGGGTCGGCCCAGACCCGGACGACGGGCGGCTGGTCGAAGTCCATGCCCGCACCGTACGGCTCCCCGCCCCCA
CCCCCTCTAGATTGGGCCGC

Downstream 100 bases:

>100_bases
GCTGGCCCGGTGGGCATCCAGATCACCCCGAGCATCCTGAACGCCGACTTCGCCGCGCTCGGCGCCGAGGTCGCCCGGAT
CGGCAGCGCCGACTGGGTGC

Product: putative DNA ligase (ATP), C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MPASKTPAVEIEVDDRVVRISNPDRVYFPDSGATKLDLVEYYLAVGPGIVNALFERPCMLHRFPKGLAGEKVHQKRLPKG
APPWVETVRLHFPRWNRTADELCVTELGSVIWAVQMSTVEFHPWNSRREDTERPDEWRIDLDPGPECSYDRVRRVAHVAH
EVLDELGVVGFPKTSGSKGLHVYVRIRPDHGFKEVRRAALAFAREVERRAPEDVDLTWWRKDRDPATVFVDYNQNARDHT
IAAAYSVRGLPDARVSTPIRWDEVDDADPRDFTIFTVPERFARLGDLHTDIDDGGGRGPFDIASLLEWADRDERDGAAGP
DDEQSE

Sequences:

>Translated_326_residues
MPASKTPAVEIEVDDRVVRISNPDRVYFPDSGATKLDLVEYYLAVGPGIVNALFERPCMLHRFPKGLAGEKVHQKRLPKG
APPWVETVRLHFPRWNRTADELCVTELGSVIWAVQMSTVEFHPWNSRREDTERPDEWRIDLDPGPECSYDRVRRVAHVAH
EVLDELGVVGFPKTSGSKGLHVYVRIRPDHGFKEVRRAALAFAREVERRAPEDVDLTWWRKDRDPATVFVDYNQNARDHT
IAAAYSVRGLPDARVSTPIRWDEVDDADPRDFTIFTVPERFARLGDLHTDIDDGGGRGPFDIASLLEWADRDERDGAAGP
DDEQSE
>Mature_325_residues
PASKTPAVEIEVDDRVVRISNPDRVYFPDSGATKLDLVEYYLAVGPGIVNALFERPCMLHRFPKGLAGEKVHQKRLPKGA
PPWVETVRLHFPRWNRTADELCVTELGSVIWAVQMSTVEFHPWNSRREDTERPDEWRIDLDPGPECSYDRVRRVAHVAHE
VLDELGVVGFPKTSGSKGLHVYVRIRPDHGFKEVRRAALAFAREVERRAPEDVDLTWWRKDRDPATVFVDYNQNARDHTI
AAAYSVRGLPDARVSTPIRWDEVDDADPRDFTIFTVPERFARLGDLHTDIDDGGGRGPFDIASLLEWADRDERDGAAGPD
DEQSE

Specific function: Unknown

COG id: COG3285

COG function: function code L; Predicted eukaryotic-type DNA primase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent DNA ligase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012309
- InterPro:   IPR012310
- InterPro:   IPR014146
- InterPro:   IPR002755
- InterPro:   IPR014144
- InterPro:   IPR014145
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF04679 DNA_ligase_A_C; PF01068 DNA_ligase_A_M; PF01896 DNA_primase_S [H]

EC number: NA

Molecular weight: Translated: 37084; Mature: 36952

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASKTPAVEIEVDDRVVRISNPDRVYFPDSGATKLDLVEYYLAVGPGIVNALFERPCML
CCCCCCCEEEEEECCEEEEECCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHCCHHH
HRFPKGLAGEKVHQKRLPKGAPPWVETVRLHFPRWNRTADELCVTELGSVIWAVQMSTVE
HHCCCCCCCCHHHHHHCCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHEEEEEEEEE
FHPWNSRREDTERPDEWRIDLDPGPECSYDRVRRVAHVAHEVLDELGVVGFPKTSGSKGL
ECCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCE
HVYVRIRPDHGFKEVRRAALAFAREVERRAPEDVDLTWWRKDRDPATVFVDYNQNARDHT
EEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCE
IAAAYSVRGLPDARVSTPIRWDEVDDADPRDFTIFTVPERFARLGDLHTDIDDGGGRGPF
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCHH
DIASLLEWADRDERDGAAGPDDEQSE
HHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PASKTPAVEIEVDDRVVRISNPDRVYFPDSGATKLDLVEYYLAVGPGIVNALFERPCML
CCCCCCEEEEEECCEEEEECCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHCCHHH
HRFPKGLAGEKVHQKRLPKGAPPWVETVRLHFPRWNRTADELCVTELGSVIWAVQMSTVE
HHCCCCCCCCHHHHHHCCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHEEEEEEEEE
FHPWNSRREDTERPDEWRIDLDPGPECSYDRVRRVAHVAHEVLDELGVVGFPKTSGSKGL
ECCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCE
HVYVRIRPDHGFKEVRRAALAFAREVERRAPEDVDLTWWRKDRDPATVFVDYNQNARDHT
EEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCE
IAAAYSVRGLPDARVSTPIRWDEVDDADPRDFTIFTVPERFARLGDLHTDIDDGGGRGPF
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCHH
DIASLLEWADRDERDGAAGPDDEQSE
HHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]