Click here to switch to the map view.

The map label for this gene is ygiS [C]

Identifier: 119716627

GI number: 119716627

Start: 2558738

End: 2560537

Strand: Direct

Name: ygiS [C]

Synonym: Noca_2400

Alternate gene names: 119716627

Gene position: 2558738-2560537 (Clockwise)

Preceding gene: 119716626

Following gene: 119716628

Centisome position: 51.32

GC content: 66.89

Gene sequence:

>1800_bases
GTGCCGCCGCTCCAGGCGCGACACACACCCAAGGAGAAGTTAATGGTCAAGTATCGAAAGCGGTTGCTCGCAGCCACCGC
TGCGATCGCGATGGCGGCCAGTCTCGCCGCCTGCGGTGGCGGCTCGGACGGCGACAGCAACCCGGGCGGCTCGAGCAGCG
AGCCGGGTGCCGAGGGCGCGGCCGGCGGCACGCTGTACTACTACATCTACGCGCCGTACGAGCACGTCGACCCGCAGCGC
ACCTACGTCGGTGTCGAGCTGACGAACTTCCGCCGGACGATCTACCGAAGCCTCGTGGCGTTCCCGATCTCGACCGACGC
CGAGGTGGCCAACACCCCGGTCCCCGACCTCGCGACCGACACCGGCACCGACGCTGACGGCGGCAAGACCTGGTCGTACA
CGATCAAGGACGGCGTCAAGTGGGAGGACGGCCAGCCGATCACGTGTGAGGACTTCAAGTACGGCGCGTCCCGCGTGTTC
GCGACCGACGTCATCACCGGTGGCCCGAACTACCTGCTGAGCTACCTCGACGTCCCCACCGACAAGGCCACCGGGCTGCC
GATCTACACCGGCCCCTACAACTCGAGCCCCGAGGGCCAGGCCGCGTTCGACAAGGCGATCACCTGCGACGGCAACACGA
TCACCTACCACTTCAACAAGCCGTGGCCCGACTTCCCGCTGGCGGTCGCCGGTCTGTCGATGATGGACCCGTACCGTCAG
GACAAGGACCAGGGCGCGAAGTCGAACTACCAGATGTTCTCGAACGGTCCTTACCGGATCGAGGGCAGCACCTGGAACAA
GAACAAGGGTGCGACGTTCGTCCGCAACGAGAACTACGACGCCTCGACCGACTCCACCGACATCCGCATGGCGCTGCCGG
ACCAGATCGAGTTCAACGTGGGTCAGACCACCGAGACGATCTACGACCAGCTGATCCAGGACTCCGGTGACGCTCAGTAC
GCCGTGACCAGCCAGCGCGTGCCGCCGGCCTACTACTCGCAGATCGTGGGCGACGTGGAGAGCCGCTCGGTGCTCGTGGC
CTCGCCGTACGTCGACTACCTGGTGCCGAACTTCCGGGTGCTCGACAACCCCGCGGTCCGCGAGGCGCTCAAGGTCTCGA
CGAACACGACGGCGTGGATCAACGCCGGTGGTGGCGAGAAGGCCTACGCCCCGGCCGAGTCGATCGTGAACCCGGCCGTG
GTCGGCTACCAGGACAACCCGGCCTTCTCCGGCCCCCAGGAGGGTGACCCGGAGGCTGCGAAGCAGATCCTCGAGGACGC
CGGCGTCCAGATGCCGTACCCGATCAAGTTCACCTACCCGAGCTCGGAGACCGCCGACAAGCAGGCCGCGGCGCTCAAGG
AGACCTGGGACAAGGCGGGCTTCGACGTGACCCTCGACGGTCTCGGCGACACCTACTACGACGTCGTGCAGCAGCCCGAC
AAGGACAGCAGCGTCATGTGGGCCGGCTGGGGCTCCGACTGGCCGTCGGCCATCACCGTCACCCCGCCGCTGTTCGACAG
CCGCCCGAACCTGACCGCGAACAGCGACGGCCAGGACTACGGCGCCTACAAGAGCGACAAGTTCAACGCTCTGGTCGACC
AGGCCGCCAACGCGGCCACGCTGGACGAGCAGACCGCCGCCCTGCAGGAGGCCGACAAGGTCCTCGGTGAGGACGTGGCC
TACATCCCGCTGGAGATCGCGCAGTTCTTCTTCCTCCACGGGTCGAAGGTCACCGGCTACACGAACACCCCCGCCTCCTC
CATGTACCCGGACCTCGGTCCGATCGGCGTGGAGCAGTGA

Upstream 100 bases:

>100_bases
CTGCTCGGTGACGGCATCCGTGACGCGCTCGACCCCAAGTCGGCCCGTTGAGCCCCGACCACGGGGACCCCCATTCTTCG
GCGGCACGGAGCCGCCGAAT

Downstream 100 bases:

>100_bases
CGGTCGTTCGTCACCGGTAACACCCAGCAACACCCGCGTCGGGTGGCCGCCCAGCGGCCACCCGACGCCTGGGGGTGGGG
GCCTCGTCGAGGGGCCCTCA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: BldKB ABC Transport System Lipoprotein; ABC Transporter Lipoprotein; Dipeptide ABC Transporter Periplasmic Protein; 4-Phytase; ABC Transporter Protein BldKB; ABC-Type Transport System Membrane Component; BldKB ABC Transporter Lipoprotein; ABC-Type Transporter Periplasmic Component; ABC Transporter Protein

Number of amino acids: Translated: 599; Mature: 598

Protein sequence:

>599_residues
MPPLQARHTPKEKLMVKYRKRLLAATAAIAMAASLAACGGGSDGDSNPGGSSSEPGAEGAAGGTLYYYIYAPYEHVDPQR
TYVGVELTNFRRTIYRSLVAFPISTDAEVANTPVPDLATDTGTDADGGKTWSYTIKDGVKWEDGQPITCEDFKYGASRVF
ATDVITGGPNYLLSYLDVPTDKATGLPIYTGPYNSSPEGQAAFDKAITCDGNTITYHFNKPWPDFPLAVAGLSMMDPYRQ
DKDQGAKSNYQMFSNGPYRIEGSTWNKNKGATFVRNENYDASTDSTDIRMALPDQIEFNVGQTTETIYDQLIQDSGDAQY
AVTSQRVPPAYYSQIVGDVESRSVLVASPYVDYLVPNFRVLDNPAVREALKVSTNTTAWINAGGGEKAYAPAESIVNPAV
VGYQDNPAFSGPQEGDPEAAKQILEDAGVQMPYPIKFTYPSSETADKQAAALKETWDKAGFDVTLDGLGDTYYDVVQQPD
KDSSVMWAGWGSDWPSAITVTPPLFDSRPNLTANSDGQDYGAYKSDKFNALVDQAANAATLDEQTAALQEADKVLGEDVA
YIPLEIAQFFFLHGSKVTGYTNTPASSMYPDLGPIGVEQ

Sequences:

>Translated_599_residues
MPPLQARHTPKEKLMVKYRKRLLAATAAIAMAASLAACGGGSDGDSNPGGSSSEPGAEGAAGGTLYYYIYAPYEHVDPQR
TYVGVELTNFRRTIYRSLVAFPISTDAEVANTPVPDLATDTGTDADGGKTWSYTIKDGVKWEDGQPITCEDFKYGASRVF
ATDVITGGPNYLLSYLDVPTDKATGLPIYTGPYNSSPEGQAAFDKAITCDGNTITYHFNKPWPDFPLAVAGLSMMDPYRQ
DKDQGAKSNYQMFSNGPYRIEGSTWNKNKGATFVRNENYDASTDSTDIRMALPDQIEFNVGQTTETIYDQLIQDSGDAQY
AVTSQRVPPAYYSQIVGDVESRSVLVASPYVDYLVPNFRVLDNPAVREALKVSTNTTAWINAGGGEKAYAPAESIVNPAV
VGYQDNPAFSGPQEGDPEAAKQILEDAGVQMPYPIKFTYPSSETADKQAAALKETWDKAGFDVTLDGLGDTYYDVVQQPD
KDSSVMWAGWGSDWPSAITVTPPLFDSRPNLTANSDGQDYGAYKSDKFNALVDQAANAATLDEQTAALQEADKVLGEDVA
YIPLEIAQFFFLHGSKVTGYTNTPASSMYPDLGPIGVEQ
>Mature_598_residues
PPLQARHTPKEKLMVKYRKRLLAATAAIAMAASLAACGGGSDGDSNPGGSSSEPGAEGAAGGTLYYYIYAPYEHVDPQRT
YVGVELTNFRRTIYRSLVAFPISTDAEVANTPVPDLATDTGTDADGGKTWSYTIKDGVKWEDGQPITCEDFKYGASRVFA
TDVITGGPNYLLSYLDVPTDKATGLPIYTGPYNSSPEGQAAFDKAITCDGNTITYHFNKPWPDFPLAVAGLSMMDPYRQD
KDQGAKSNYQMFSNGPYRIEGSTWNKNKGATFVRNENYDASTDSTDIRMALPDQIEFNVGQTTETIYDQLIQDSGDAQYA
VTSQRVPPAYYSQIVGDVESRSVLVASPYVDYLVPNFRVLDNPAVREALKVSTNTTAWINAGGGEKAYAPAESIVNPAVV
GYQDNPAFSGPQEGDPEAAKQILEDAGVQMPYPIKFTYPSSETADKQAAALKETWDKAGFDVTLDGLGDTYYDVVQQPDK
DSSVMWAGWGSDWPSAITVTPPLFDSRPNLTANSDGQDYGAYKSDKFNALVDQAANAATLDEQTAALQEADKVLGEDVAY
IPLEIAQFFFLHGSKVTGYTNTPASSMYPDLGPIGVEQ

Specific function: Probably Part Of A Binding-Protein-Dependent Transport System. [C]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64770; Mature: 64639

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLQARHTPKEKLMVKYRKRLLAATAAIAMAASLAACGGGSDGDSNPGGSSSEPGAEGA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
AGGTLYYYIYAPYEHVDPQRTYVGVELTNFRRTIYRSLVAFPISTDAEVANTPVPDLATD
CCCEEEEEEECCHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCC
TGTDADGGKTWSYTIKDGVKWEDGQPITCEDFKYGASRVFATDVITGGPNYLLSYLDVPT
CCCCCCCCCEEEEEECCCCEECCCCCEEHHCCCCCCCEEEEEHEECCCHHHHHHHHCCCC
DKATGLPIYTGPYNSSPEGQAAFDKAITCDGNTITYHFNKPWPDFPLAVAGLSMMDPYRQ
CCCCCCEEEECCCCCCCCCCHHHCCEEEECCCEEEEECCCCCCCCCHHHHCHHHHCCHHH
DKDQGAKSNYQMFSNGPYRIEGSTWNKNKGATFVRNENYDASTDSTDIRMALPDQIEFNV
HHHCCCCCCCEEECCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEECC
GQTTETIYDQLIQDSGDAQYAVTSQRVPPAYYSQIVGDVESRSVLVASPYVDYLVPNFRV
CCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEECCHHHHHCCCCEE
LDNPAVREALKVSTNTTAWINAGGGEKAYAPAESIVNPAVVGYQDNPAFSGPQEGDPEAA
ECCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCHHHH
KQILEDAGVQMPYPIKFTYPSSETADKQAAALKETWDKAGFDVTLDGLGDTYYDVVQQPD
HHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCC
KDSSVMWAGWGSDWPSAITVTPPLFDSRPNLTANSDGQDYGAYKSDKFNALVDQAANAAT
CCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCH
LDEQTAALQEADKVLGEDVAYIPLEIAQFFFLHGSKVTGYTNTPASSMYPDLGPIGVEQ
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCEECCCCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PPLQARHTPKEKLMVKYRKRLLAATAAIAMAASLAACGGGSDGDSNPGGSSSEPGAEGA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
AGGTLYYYIYAPYEHVDPQRTYVGVELTNFRRTIYRSLVAFPISTDAEVANTPVPDLATD
CCCEEEEEEECCHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCC
TGTDADGGKTWSYTIKDGVKWEDGQPITCEDFKYGASRVFATDVITGGPNYLLSYLDVPT
CCCCCCCCCEEEEEECCCCEECCCCCEEHHCCCCCCCEEEEEHEECCCHHHHHHHHCCCC
DKATGLPIYTGPYNSSPEGQAAFDKAITCDGNTITYHFNKPWPDFPLAVAGLSMMDPYRQ
CCCCCCEEEECCCCCCCCCCHHHCCEEEECCCEEEEECCCCCCCCCHHHHCHHHHCCHHH
DKDQGAKSNYQMFSNGPYRIEGSTWNKNKGATFVRNENYDASTDSTDIRMALPDQIEFNV
HHHCCCCCCCEEECCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEECC
GQTTETIYDQLIQDSGDAQYAVTSQRVPPAYYSQIVGDVESRSVLVASPYVDYLVPNFRV
CCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEECCHHHHHCCCCEE
LDNPAVREALKVSTNTTAWINAGGGEKAYAPAESIVNPAVVGYQDNPAFSGPQEGDPEAA
ECCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCHHHH
KQILEDAGVQMPYPIKFTYPSSETADKQAAALKETWDKAGFDVTLDGLGDTYYDVVQQPD
HHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCC
KDSSVMWAGWGSDWPSAITVTPPLFDSRPNLTANSDGQDYGAYKSDKFNALVDQAANAAT
CCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCH
LDEQTAALQEADKVLGEDVAYIPLEIAQFFFLHGSKVTGYTNTPASSMYPDLGPIGVEQ
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCEECCCCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA