| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is apt
Identifier: 119716618
GI number: 119716618
Start: 2546455
End: 2547012
Strand: Direct
Name: apt
Synonym: Noca_2391
Alternate gene names: 119716618
Gene position: 2546455-2547012 (Clockwise)
Preceding gene: 119716617
Following gene: 119716619
Centisome position: 51.07
GC content: 73.84
Gene sequence:
>558_bases GTGACGCTGCCCGGGCCGGAGGCACCGGGGCTCTCCGAGGCGCTCGCCCTGATCGCCGACGTCCCCGACTTCCCCCAGCC CGGGATCCTCTTCAAGGACATCACGCCGCTGCTGGCCGAGCACGCGGCGCTCGAGGCGGTCGTCGCGGCCCTCGCCGCAC CCGGGCGCGATCAGACCGGTGCCCCGGTCGTCGACAAGGTGCTGGGGATGGAGTCGCGCGGCTTCATCCTGGGCGCGCCG GTCGCGCTGGCCCTCGGCGTGGGGTTCGTCCCGGTCCGCAAGGCCGGCAAGCTGCCGCGAGCGACGTACGCCGTCTCCTA CGCGCTGGAGTACGGCGAGGCCACGCTCGAGGTGCACCAGGACGCACTCGAGCCGGGGGACCGGGTGCTGCTCGTCGACG ACGTGCTCGCCACCGGCGGGACCGCGCGGGCGACGATCGACCTGGTCGAGAAGTGCGGTGCCAGCGTGCACGCCGTCGCG ATCCTCATGGAGCTCGGCTTCCTGCCCGGCCGCGAGGCGCTCGGTACGGTGCCCCTGACCACGCTCCTCACCGTCTGA
Upstream 100 bases:
>100_bases GGGGCCGGATCGCCCCCCAGGGTCACGGCCCGGTCCGGCCCTCCAGCGCCGCCGGCCGCCAGCAGCCGACCCGCCAGCCC CGCTCCAAGCGGGGCAAGAA
Downstream 100 bases:
>100_bases GAGATACGTAGACTGGCCGGGTGACCGAGGAACGCACCGCCCCGCCCACGCAGGAGCGGCGCGCCTCGGAGCCGGCACCG TCCACGCGCAGCATGCGCGC
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTLPGPEAPGLSEALALIADVPDFPQPGILFKDITPLLAEHAALEAVVAALAAPGRDQTGAPVVDKVLGMESRGFILGAP VALALGVGFVPVRKAGKLPRATYAVSYALEYGEATLEVHQDALEPGDRVLLVDDVLATGGTARATIDLVEKCGASVHAVA ILMELGFLPGREALGTVPLTTLLTV
Sequences:
>Translated_185_residues MTLPGPEAPGLSEALALIADVPDFPQPGILFKDITPLLAEHAALEAVVAALAAPGRDQTGAPVVDKVLGMESRGFILGAP VALALGVGFVPVRKAGKLPRATYAVSYALEYGEATLEVHQDALEPGDRVLLVDDVLATGGTARATIDLVEKCGASVHAVA ILMELGFLPGREALGTVPLTTLLTV >Mature_184_residues TLPGPEAPGLSEALALIADVPDFPQPGILFKDITPLLAEHAALEAVVAALAAPGRDQTGAPVVDKVLGMESRGFILGAPV ALALGVGFVPVRKAGKLPRATYAVSYALEYGEATLEVHQDALEPGDRVLLVDDVLATGGTARATIDLVEKCGASVHAVAI LMELGFLPGREALGTVPLTTLLTV
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=167, Percent_Identity=46.7065868263473, Blast_Score=145, Evalue=2e-35, Organism=Homo sapiens, GI71773201, Length=122, Percent_Identity=49.1803278688525, Blast_Score=119, Evalue=2e-27, Organism=Escherichia coli, GI1786675, Length=164, Percent_Identity=47.5609756097561, Blast_Score=149, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17509087, Length=167, Percent_Identity=47.9041916167665, Blast_Score=143, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6323619, Length=167, Percent_Identity=41.3173652694611, Blast_Score=124, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6320649, Length=161, Percent_Identity=35.4037267080745, Blast_Score=89, Evalue=5e-19, Organism=Drosophila melanogaster, GI17136334, Length=157, Percent_Identity=40.1273885350318, Blast_Score=110, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_NOCSJ (A1SJB1)
Other databases:
- EMBL: CP000509 - RefSeq: YP_923583.1 - ProteinModelPortal: A1SJB1 - SMR: A1SJB1 - STRING: A1SJB1 - GeneID: 4599491 - GenomeReviews: CP000509_GR - KEGG: nca:Noca_2391 - eggNOG: COG0503 - HOGENOM: HBG703830 - OMA: GILFYDI - PhylomeDB: A1SJB1 - ProtClustDB: CLSK2783557 - BioCyc: NSP35761:NOCA_2391-MONOMER - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836 - TIGRFAMs: TIGR01090
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 18964; Mature: 18833
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPGPEAPGLSEALALIADVPDFPQPGILFKDITPLLAEHAALEAVVAALAAPGRDQTG CCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC APVVDKVLGMESRGFILGAPVALALGVGFVPVRKAGKLPRATYAVSYALEYGEATLEVHQ CHHHHHHHCCCCCCEEEECHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHH DALEPGDRVLLVDDVLATGGTARATIDLVEKCGASVHAVAILMELGFLPGREALGTVPLT HHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCHH TLLTV HHHCC >Mature Secondary Structure TLPGPEAPGLSEALALIADVPDFPQPGILFKDITPLLAEHAALEAVVAALAAPGRDQTG CCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC APVVDKVLGMESRGFILGAPVALALGVGFVPVRKAGKLPRATYAVSYALEYGEATLEVHQ CHHHHHHHCCCCCCEEEECHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHH DALEPGDRVLLVDDVLATGGTARATIDLVEKCGASVHAVAILMELGFLPGREALGTVPLT HHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCHH TLLTV HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA